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Whole-genome analyses resolve early branches in the tree of life of modern birds

Jarvis, Erich D. (author)
Mirarab, Siavash (author)
Aberer, Andre J. (author)
show more...
Li, Bo (author)
Houde, Peter (author)
Li, Cai (author)
Ho, Simon Y. W. (author)
Faircloth, Brant C. (author)
Nabholz, Benoit (author)
Howard, Jason T. (author)
Suh, Alexander (author)
Uppsala universitet,Evolutionsbiologi
Weber, Claudia C. (author)
Uppsala universitet,Evolutionsbiologi
da Fonseca, Rute R. (author)
Li, Jianwen (author)
Zhang, Fang (author)
Li, Hui (author)
Zhou, Long (author)
Narula, Nitish (author)
Liu, Liang (author)
Ganapathy, Ganesh (author)
Boussau, Bastien (author)
Bayzid, Md. Shamsuzzoha (author)
Zavidovych, Volodymyr (author)
Subramanian, Sankar (author)
Gabaldon, Toni (author)
Capella-Gutierrez, Salvador (author)
Huerta-Cepas, Jaime (author)
Rekepalli, Bhanu (author)
Munch, Kasper (author)
Schierup, Mikkel (author)
Lindow, Bent (author)
Warren, Wesley C. (author)
Ray, David (author)
Green, Richard E. (author)
Bruford, Michael W. (author)
Zhan, Xiangjiang (author)
Dixon, Andrew (author)
Li, Shengbin (author)
Li, Ning (author)
Huang, Yinhua (author)
Derryberry, Elizabeth P. (author)
Bertelsen, Mads Frost (author)
Sheldon, Frederick H. (author)
Brumfield, Robb T. (author)
Mello, Claudio V. (author)
Lovell, Peter V. (author)
Wirthlin, Morgan (author)
Cruz Schneider, Maria Paula (author)
Prosdocimi, Francisco (author)
Samaniego, Jose Alfredo (author)
Vargas Velazquez, Amhed Missael (author)
Alfaro-Nunez, Alonzo (author)
Campos, Paula F. (author)
Petersen, Bent (author)
Sicheritz-Ponten, Thomas (author)
Pas, An (author)
Bailey, Tom (author)
Scofield, Paul (author)
Bunce, Michael (author)
Lambert, David M. (author)
Zhou, Qi (author)
Perelman, Polina (author)
Driskell, Amy C. (author)
Shapiro, Beth (author)
Xiong, Zijun (author)
Zeng, Yongli (author)
Liu, Shiping (author)
Li, Zhenyu (author)
Liu, Binghang (author)
Wu, Kui (author)
Xiao, Jin (author)
Yinqi, Xiong (author)
Zheng, Qiuemei (author)
Zhang, Yong (author)
Yang, Huanming (author)
Wang, Jian (author)
Smeds, Linnea (author)
Uppsala universitet,Evolutionsbiologi
Rheindt, Frank E. (author)
Braun, Michael (author)
Fjeldsa, Jon (author)
Orlando, Ludovic (author)
Barker, F. Keith (author)
Jonsson, Knud Andreas (author)
Johnson, Warren (author)
Koepfli, Klaus-Peter (author)
O'Brien, Stephen (author)
Haussler, David (author)
Ryder, Oliver A. (author)
Rahbek, Carsten (author)
Willerslev, Eske (author)
Graves, Gary R. (author)
Glenn, Travis C. (author)
McCormack, John (author)
Burt, Dave (author)
Ellegren, Hans (author)
Uppsala universitet,Evolutionsbiologi
Alström, Per (author)
Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,ARTDATABANKEN,Swedish Species Information Centre,Chinese Academy of Sciences
Edwards, Scott V. (author)
Stamatakis, Alexandros (author)
Mindell, David P. (author)
Cracraft, Joel (author)
Braun, Edward L. (author)
Warnow, Tandy (author)
Jun, Wang (author)
Gilbert, M. Thomas P. (author)
Zhang, Guojie (author)
show less...
 (creator_code:org_t)
 
American Association for the Advancement of Science (AAAS), 2014
2014
English.
In: Science. - : American Association for the Advancement of Science (AAAS). - 0036-8075 .- 1095-9203. ; 346:6215, s. 1320-1331
  • Journal article (peer-reviewed)
Abstract Subject headings
Close  
  • To better determine the history of modern birds, we performed a genome-scale phylogenetic analysis of 48 species representing all orders of Neoaves using phylogenomic methods created to handle genome-scale data. We recovered a highly resolved tree that confirms previously controversial sister or close relationships. We identified the first divergence in Neoaves, two groups we named Passerea and Columbea, representing independent lineages of diverse and convergently evolved land and water bird species. Among Passerea, we infer the common ancestor of core landbirds to have been an apex predator and confirm independent gains of vocal learning. Among Columbea, we identify pigeons and flamingoes as belonging to sister clades. Even with whole genomes, some of the earliest branches in Neoaves proved challenging to resolve, which was best explained by massive protein-coding sequence convergence and high levels of incomplete lineage sorting that occurred during a rapid radiation after the Cretaceous-Paleogene mass extinction event about 66 million years ago.

Subject headings

NATURVETENSKAP  -- Biologi -- Evolutionsbiologi (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences -- Evolutionary Biology (hsv//eng)
NATURVETENSKAP  -- Biologi -- Biologisk systematik (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences -- Biological Systematics (hsv//eng)
NATURVETENSKAP  -- Biologi -- Ekologi (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences -- Ecology (hsv//eng)
NATURVETENSKAP  -- Biologi -- Zoologi (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences -- Zoology (hsv//eng)
NATURVETENSKAP  -- Biologi -- Bioinformatik och systembiologi (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences -- Bioinformatics and Systems Biology (hsv//eng)
NATURVETENSKAP  -- Biologi -- Genetik (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences -- Genetics (hsv//eng)

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art (subject category)

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By the author/editor
Jarvis, Erich D.
Mirarab, Siavash
Aberer, Andre J.
Li, Bo
Houde, Peter
Li, Cai
show more...
Ho, Simon Y. W.
Faircloth, Brant ...
Nabholz, Benoit
Howard, Jason T.
Suh, Alexander
Weber, Claudia C ...
da Fonseca, Rute ...
Li, Jianwen
Zhang, Fang
Li, Hui
Zhou, Long
Narula, Nitish
Liu, Liang
Ganapathy, Ganes ...
Boussau, Bastien
Bayzid, Md. Sham ...
Zavidovych, Volo ...
Subramanian, San ...
Gabaldon, Toni
Capella-Gutierre ...
Huerta-Cepas, Ja ...
Rekepalli, Bhanu
Munch, Kasper
Schierup, Mikkel
Lindow, Bent
Warren, Wesley C ...
Ray, David
Green, Richard E ...
Bruford, Michael ...
Zhan, Xiangjiang
Dixon, Andrew
Li, Shengbin
Li, Ning
Huang, Yinhua
Derryberry, Eliz ...
Bertelsen, Mads ...
Sheldon, Frederi ...
Brumfield, Robb ...
Mello, Claudio V ...
Lovell, Peter V.
Wirthlin, Morgan
Cruz Schneider, ...
Prosdocimi, Fran ...
Samaniego, Jose ...
Vargas Velazquez ...
Alfaro-Nunez, Al ...
Campos, Paula F.
Petersen, Bent
Sicheritz-Ponten ...
Pas, An
Bailey, Tom
Scofield, Paul
Bunce, Michael
Lambert, David M ...
Zhou, Qi
Perelman, Polina
Driskell, Amy C.
Shapiro, Beth
Xiong, Zijun
Zeng, Yongli
Liu, Shiping
Li, Zhenyu
Liu, Binghang
Wu, Kui
Xiao, Jin
Yinqi, Xiong
Zheng, Qiuemei
Zhang, Yong
Yang, Huanming
Wang, Jian
Smeds, Linnea
Rheindt, Frank E ...
Braun, Michael
Fjeldsa, Jon
Orlando, Ludovic
Barker, F. Keith
Jonsson, Knud An ...
Johnson, Warren
Koepfli, Klaus-P ...
O'Brien, Stephen
Haussler, David
Ryder, Oliver A.
Rahbek, Carsten
Willerslev, Eske
Graves, Gary R.
Glenn, Travis C.
McCormack, John
Burt, Dave
Ellegren, Hans
Alström, Per
Edwards, Scott V ...
Stamatakis, Alex ...
Mindell, David P ...
Cracraft, Joel
Braun, Edward L.
Warnow, Tandy
Jun, Wang
Gilbert, M. Thom ...
Zhang, Guojie
show less...
About the subject
NATURAL SCIENCES
NATURAL SCIENCES
and Biological Scien ...
and Evolutionary Bio ...
NATURAL SCIENCES
NATURAL SCIENCES
and Biological Scien ...
and Biological Syste ...
NATURAL SCIENCES
NATURAL SCIENCES
and Biological Scien ...
and Ecology
NATURAL SCIENCES
NATURAL SCIENCES
and Biological Scien ...
and Zoology
NATURAL SCIENCES
NATURAL SCIENCES
and Biological Scien ...
and Bioinformatics a ...
NATURAL SCIENCES
NATURAL SCIENCES
and Biological Scien ...
and Genetics
Articles in the publication
Science
By the university
Uppsala University
Swedish University of Agricultural Sciences

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