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  • Caputo, Andrea, 1988- (författare)
  • Genomic and morphological diversity of marine planktonic diatom-diazotroph associations : a continuum of integration and diversification through geological time
  • 2019
  • Doktorsavhandling (övrigt vetenskapligt)abstract
    • Symbioses between eukaryotes and nitrogen (N2)-fixing cyanobacteria (or diazotrophs) are quite common in the plankton community. A few genera of diatoms (Bacillariophyceae) such as Rhizosolenia, Hemiaulus and Chaetoceros are well known to form symbioses with the heterocystous diazotrophic cyanobacteria Richelia intracellularis and Calothrix rhizosoleniae. The latter are also called diatom-diazotroph associations, or DDAs. Up to now, the prokaryotic partners have been morphologically and genetically characterized, and the phylogenetic reconstruction of the well conserved nifH gene (encodes for the nitrogenase enzyme) placed the symbionts in 3 clusters based on their host-specificity, i.e. het-1 (Rhizosolenia-R. intracellularis), het-2 (Hemiaulus-R. intracellularis), and het-3 (Chaetoceros-C- rhizosoleniae). Conversely, the diatom-hosts, major representative of the phytoplankton community and crucial contributors to the carbon (C) biogeochemical cycle, have been understudied.The first aim of this thesis was to genetically and morphologically characterize the diatom-hosts, and to reconstruct the evolutionary background of the partnerships and the symbiont integration in the host. The molecular-clock analysis reconstruction showed the ancient appearance of the DDAs, and the traits characterizing the ancestors. In addition, diatom-hosts bearing internal symbionts (with more eroded draft genomes) appeared earlier than diatom-hosts with external symbionts. Finally a blast survey highlighted a broader distribution of the DDAs than expected.The second aim of this thesis was to compare genetic and physiological characteristics of the DDAs symbionts with the other eukaryote-diazotroph symbiosis, i.e. prymnesiophyte-UCYN-A (or Candidatus Atelocyanobacterium thalassa). The genome comparison highlighted more genes for transporters in het-3 (external symbiont) and in the UCYN-A based symbiosis, suggesting that symbiont location might be relevant also for metabolic exchanges and interactions with the host and/or environment. Moreover, a summary of methodological biases that brought to an underestimation of the DDAs is reported.The third aim of this thesis was to determine the distribution of the DDAs in the South Pacific Ocean using a quantitative polymerase chain reaction (qPCR) approach and to outline the environmental drivers of such distribution. Among the het-groups, het-1 was the most abundant/detected and co-occurred with the other 2 symbiotic strains, all responding similarly to the influence of abiotic factors, such as temperature and salinity (positive and negative correlation, respectively). Globally, Trichodesmium dominated the qPCR detections, followed by UCYN-B. UCYN-A phylotypes (A-1, A-2) were detected without their proposed hosts, for which new oligonucleotides were designed. The latter suggested a facultative symbiosis. Finally, microscopy observations of the het-groups highlighted a discrepancy with the qPCR counts (i.e. the former were several order of magnitudes lower), leading to the idea of developing a new approach to quantify the DDAs.  The fourth aim of this thesis was to develop highly specific in situ hybridization assays (CARD-FISH) to determine the presence of alternative life-stages and/or free-living partners. The new assays were applied to samples collected in the South China Sea and compared with abundance estimates from qPCR assays for the 3 symbiotic strains. Free-living cells were indeed detected along the transect, mainly at deeper depths. Free-living symbionts had two morphotypes: trichomes and single-cells. The latter were interpreted as temporary life-stages. Consistent co-occurrence of the 3 het-groups was also found in the SCS and application of a SEM model predicted positive interactions between the het groups. We interpreted the positive interaction as absence of intra-specific competition, and consistent with the previous study, temperature and salinity were predicted as major drivers of the DDAs distribution.
  • Bonnot, N. C., et al. (författare)
  • Who’s afraid of the big bad wolf? : Variation in the stress response among personalities and populations in a large wild herbivore
  • 2018
  • Ingår i: Oecologia. - Amsterdam : Springer. - 0029-8549 .- 1432-1939. ; 188:1, s. 85-95
  • Tidskriftsartikel (refereegranskat)abstract
    • Faced with rapid environmental changes, individuals may express different magnitude and plasticity in their response to a given stressor. However, little is known about the causes of variation in phenotypic plasticity of the stress response in wild populations. In the present study, we repeatedly captured individual roe deer (Capreolus capreolus) from two wild populations in Sweden exposed to differing levels of predation pressure and measured plasma concentrations of stress-induced cortisol and behavioral docility. While controlling for the marked effects of habituation, we found clear between-population differences in the stress-induced cortisol response. Roe deer living in the area that was recently recolonized by lynx (Lynx lynx) and wolves (Canis lupus) expressed cortisol levels that were around 30% higher than roe deer in the human-dominated landscape free of large carnivores. In addition, for the first time to our knowledge, we investigated the stress-induced cortisol response in free-ranging newborn fawns and found no evidence for hypo-responsiveness during early life in this species. Indeed, stress-induced cortisol levels were of similar magnitude and differed between populations to a similar extent in both neonates and adults. Finally, at an individual level, we found that both cortisol and docility levels were strongly repeatable, and weakly negatively inter-correlated, suggesting that individuals differed consistently in how they respond to a stressor, and supporting the existence of a stress-management syndrome in roe deer. © 2018, The Author(s).
  • Hoffsten, Per-Ola (författare)
  • Galvån : Ett riksintresseområde för naturvården, X 105
  • 1992
  • Rapport (övrigt vetenskapligt)abstract
    • RiksintressetRikedom av forsar och strömmar i kombination med vattendragets storlek utgör en ovanlig och därför värdefull miljö.Området utgör även en värdefull biotop för sårbart djurliv bl. a utter, nedströmsvandrande insjööring.Översvämningsbetingade våtmarksmiljöer med rik flora, bl. a Kung Karls spira, intressant strandflora invid sidofåror, samt en unik svampflora invid biflödet Nybobäcken.
  • Hurtado, P., et al. (författare)
  • Disentangling functional trait variation and covariation in epiphytic lichens along a continent-wide latitudinal gradient
  • 2020
  • Ingår i: Proceedings of the Royal Society of London. Biological Sciences. - : ROYAL SOC. - 0962-8452 .- 1471-2954. ; 287:1922
  • Tidskriftsartikel (refereegranskat)abstract
    • Characterizing functional trait variation and covariation, and its drivers, is critical to understand the response of species to changing environmental conditions. Evolutionary and environmental factors determine how traits vary among and within species at multiple scales. However, disentangling their relative contribution is challenging and a comprehensive trait-environment framework addressing such questions is missing in lichens. We investigated the variation in nine traits related to photosynthetic performance, water use and nutrient acquisition applying phylogenetic comparative analyses in lichen epiphytic communities on beech across Europe. These poikilohydric organisms offer a valuable model owing to their inherent limitations to buffer contrasting environmental conditions. Photobiont type and growth form captured differences in certain physiological traits whose variation was largely determined by evolutionary processes (i.e. phylogenetic history), although the intraspecific component was non-negligible. Seasonal temperature fluctuations also had an impact on trait variation, while nitrogen content depended on photobiont type rather than nitrogen deposition. The inconsistency of trait covariation among and within species prevented establishing major resource use strategies in lichens. However, we did identify a general pattern related to the water-use strategy. Thus, to robustly unveil lichen responses under different climatic scenarios, it is necessary to incorporate both among and within-species trait variation and covariation.
  • Janson, S., et al. (författare)
  • Population genetic structure of crucian carp (Carassius carassius) in man-made ponds and wild populations in Sweden
  • 2015
  • Ingår i: Aquaculture International. - 0967-6120 .- 1573-143X. ; 23:1, s. 359-368
  • Tidskriftsartikel (refereegranskat)abstract
    • Although once popular prior to the last century, the aquaculture of crucian carp Carassius carassius (L. 1758) in Sweden gradually fell from favour. This is the first genetic comparison of crucian carp from historic man-made ponds in the Scandinavian Peninsula. The aim was to identify old populations without admixture and to compare the relationship of pond populations from different provinces in Sweden. In total, nine microsatellite loci from 234 individuals from 20 locations in varied parts of Sweden were analysed. The genetic distances of crucian carp populations indicated that the populations in the southernmost province of Sweden, Scania, shared a common history. A pond population in the province SmAyenland also showed a common inheritance with this group. In the province Uppland, further north in Sweden, the population genetic distances suggested a much more complex history of crucian carp distributions in the ponds. The data showed that there are some ponds with potentially old populations without admixture, but also that several ponds might have been stocked with fish from many sources.
  • Spagopoulou, Foteini, et al. (författare)
  • Shifts in Reproductive Investment in Response to Competitors Lower Male Reproductive Success
  • 2020
  • Ingår i: American Naturalist. - : University of Chicago Press. - 0003-0147 .- 1537-5323. ; 196:3, s. 355-368
  • Tidskriftsartikel (refereegranskat)abstract
    • In many species, males exhibit phenotypic plasticity in sexually selected traits when exposed to social cues about the intensity of sexual competition. To date, however, few studies have tested how this plasticity affects male reproductive success. We initially tested whether male mosquitofish,Gambusia holbrooki(Poeciliidae), change their investment in traits under pre- and postcopulatory sexual selection depending on the social environment. For a full spermatogenesis cycle, focal males were exposed to visual and chemical cues of rivals that were either present (competitive treatment) or absent (control). Males from the competitive treatment had significantly slower-swimming sperm but did not differ in sperm count from control males. When two males competed for a female, competitive treatment males also made significantly fewer copulation attempts and courtship displays than control males. Further, paternity analysis of 708 offspring from 148 potential sires, testing whether these changes in reproductive traits affected male reproductive success, showed that males previously exposed to cues about the presence of rivals sired significantly fewer offspring when competing with a control male. We discuss several possible explanations for these unusual findings.
  • Stenberg, Per, et al. (författare)
  • Cytology of Asexual Animals
  • 2009
  • Ingår i: Lost Sex. - Dordrecht : Springer Netherlands. - 9789048127696 - 9789048127702 ; , s. 63-74
  • Bokkapitel (övrigt vetenskapligt)abstract
    • We review the cytological mechanisms underlying asexual reproduction, i.e. reproduction without fertilization, in animals. Asexuality or parthenogenesis has evolved many times and the cytological mechanisms to restore the parental chromosome number can vary between and even within species. In automictic or meiotic parthenogenesis, meiosis takes place but the chromosomal constitution of the mother is restored through one or several different mechanisms. Some of these mechanisms enforce homozygosity at all loci while some other mechanisms pass the genome of the mother intact to the offspring. In apomictic or mitotic parthenogenesis the eggs are formed through what is essentially a set of mitoses. Polyploidy, is in general incompatible with chromosomal sex determination and is a rare condition in animals. However, many asexual and hermaphroditic forms are polyploid to various degrees. Polyploidy is divided into allo- and autopolyploidy. In the former mode the chromosome sets are derived from two or more different species while in autopolyploidy the multiplication has taken place within one species. We discuss the evolutionary consequences of the different cytological mechanisms involved in asexual reproduction.
  • Renner, Samuel, et al. (författare)
  • Man-made lakes form species-rich dragonfly communities in the Brazilian Atlantic Forest (Odonata)
  • 2016
  • Ingår i: Odonatologica. - Bergen : Societas Internationalis Odonatologica / International Odonatological Foundation. - 0375-0183. ; 45:3-4, s. 135-154
  • Tidskriftsartikel (refereegranskat)abstract
    • One of the forest types occurring in Southern Brazil is the Mixed Ombrophilous Forest (MOF), a subtype of the Atlantic Forest and one of the biodiversity hotspots on Earth. We sampled adult Odonata at 30 locations in the Floresta Nacional de São Francisco de Paula (FLONA-SFP), Rio Grande do Sul, Brazil, a national reserve which is divided into several sectors of MOF, planted Araucaria angustifolia, Pinus elliottii used for sustainable and financial purposes, and open fields. There are three types of aquatic environments in the reserve: lakes, swamps, and rivers/streams. Our aim was to obtain an overview of the species’ distribution patterns in the three types of aquatic environments and to evaluate the species occurring in lakes, an exclusively man-made habitat in this area. We recorded 46 species from seven odonate families; 25 species (x = 5.71 ± 1.77 SD) occurring in rivers/ streams, 24 in lakes (11.57 ± 2.15) and 21 in swamps (5.22 ± 3.60). Using Non-metric Multidimensional Scaling (NmDS), we showed that the species composition differed clearly between the three types of aquatic habitats. While swamps and rivers/streams had a relatively similar and uniform species composition, species in the lakes were more varied but the total species number was almost as high as that of the rivers/streams. The lake communities also differed distinctly from those of the other habitats, and we assume that the lake species originate from other degraded areas in the vicinity, indicating that the remains of the Atlantic Forest has already been strongly altered by humans. Given the poor knowledge of the Odonata in the Atlantic Forest/MOF, we hope that our study may increase the understanding of the communities, and contribute to the development of conservation measures for this fragmented biome.
  • Lindberg, Tom, et al. (författare)
  • Översiktlig naturinventering utförd år 1975 av Ljusdals kommun
  • 1975
  • Rapport (övrigt vetenskapligt)abstract
    • Inventeringens målsättning kan sammanfattas i följande punkter: 1) Registrerings av redan kända naturområden som kan komma att bli föremål för naturvårdande åtgärder.2) Uppspårande av eventuella nya sådana områden.3) kontroller i fäll av noterade objekt och översiktlig beskrivning dessa.4) Gardering av objekten enligt SNV: ”Råd och anvisningar för naturinventering och naturvårdsplanering”. Graderingen leder fram till en klassificering i riks-, läns och lokalintresse för varje objekt.
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