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Improved Genome Ass...
Improved Genome Assembly and Annotation for the Rock Pigeon (Columba livia)
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- Holt, Carson (author)
- Dept Human Genet, Vienna, Austria;USTAR Ctr Genet Discovery, Vienna, Austria
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- Campbell, Michael (author)
- Dept Human Genet, Vienna, Austria;Cold Spring Harbor Lab, Div Plant Biol, POB 100, Cold Spring Harbor, NY 11724 USA
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- Keays, David A. (author)
- Res Inst Mol Pathol, Vienna, Austria
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- Edelman, Nathaniel (author)
- Res Inst Mol Pathol, Vienna, Austria;Harvard Univ, Dept Organism & Evolutionary Biol, Cambridge, MA 02138 USA
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- Kapusta, Aurelie (author)
- Dept Human Genet, Vienna, Austria;USTAR Ctr Genet Discovery, Vienna, Austria
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- Maclary, Emily (author)
- Univ Utah, Dept Biol, 257 S 1400 E, Salt Lake City, UT 84108 USA
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- Domyan, Eric T. (author)
- Univ Utah, Dept Biol, 257 S 1400 E, Salt Lake City, UT 84108 USA;Utah Valley Univ, Dept Biol, Orem, UT USA
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- Suh, Alexander (author)
- Uppsala universitet,Evolutionsbiologi
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- Warren, Wesley C. (author)
- Washington Univ, Genome Inst, St Louis, MO USA
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- Yandell, Mark (author)
- Dept Human Genet, Vienna, Austria;USTAR Ctr Genet Discovery, Vienna, Austria
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- Gilbert, M. Thomas P. (author)
- Univ Copenhagen, Nat Hist Museum Denmark, Copenhagen, Denmark;Norwegian Univ Sci & Technol, Univ Museum, Trondheim, Norway
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- Shapiro, Michael D. (author)
- Univ Utah, Dept Biol, 257 S 1400 E, Salt Lake City, UT 84108 USA
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(creator_code:org_t)
- 2018-05-01
- 2018
- English.
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In: G3. - : GENETICS SOCIETY AMERICA. - 2160-1836. ; 8:5, s. 1391-1398
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Abstract
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- The domestic rock pigeon (Columba livia) is among the most widely distributed and phenotypically diverse avian species. C. livia is broadly studied in ecology, genetics, physiology, behavior, and evolutionary biology, and has recently emerged as a model for understanding the molecular basis of anatomical diversity, the magnetic sense, and other key aspects of avian biology. Here we report an update to the C. livia genome reference assembly and gene annotation dataset. Greatly increased scaffold lengths in the updated reference assembly, along with an updated annotation set, provide improved tools for evolutionary and functional genetic studies of the pigeon, and for comparative avian genomics in general.
Subject headings
- NATURVETENSKAP -- Biologi -- Genetik (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Genetics (hsv//eng)
Keyword
- Columba livia
- rock pigeon
- HiRise assembly
- MAKER annotation
- Genome Report
Publication and Content Type
- ref (subject category)
- art (subject category)
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- By the author/editor
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Holt, Carson
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Campbell, Michae ...
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Keays, David A.
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Edelman, Nathani ...
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Kapusta, Aurelie
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Maclary, Emily
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Domyan, Eric T.
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Suh, Alexander
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Warren, Wesley C ...
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Yandell, Mark
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Gilbert, M. Thom ...
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Shapiro, Michael ...
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- About the subject
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
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and Genetics
- Articles in the publication
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G3
- By the university
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Uppsala University