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Functional Characte...
Functional Characterization of Genetic Variant Effects on Expression
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- Flynn, Elise D. (författare)
- New York Genome Ctr, New York, NY 10003 USA.;Columbia Univ, Dept Syst Biol, New York, NY 10032 USA.
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- Lappalainen, Tuuli (författare)
- KTH,Genteknologi,Science for Life Laboratory, SciLifeLab,New York Genome Ctr, New York, NY 10003 USA.;Columbia Univ, Dept Syst Biol, New York, NY 10032 USA
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New York Genome Ctr, New York, NY 10003 USA;Columbia Univ, Dept Syst Biol, New York, NY 10032 USA. Genteknologi (creator_code:org_t)
- Annual Reviews, 2022
- 2022
- Engelska.
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Ingår i: Annual Review of Biomedical Data Science. - : Annual Reviews. - 2574-3414. ; 5, s. 119-139
- Relaterad länk:
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https://urn.kb.se/re...
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visa fler...
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https://doi.org/10.1...
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Abstract
Ämnesord
Stäng
- Thousands of common genetic variants in the human population have been associated with disease risk and phenotypic variation by genome-wide association studies (GWAS). However, the majority of GWAS variants fall into noncoding regions of the genome, complicating our understanding of their regulatory functions, and few molecular mechanisms of GWAS variant effects have been clearly elucidated. Here, we set out to review genetic variant effects, focusing on expression quantitative trait loci (eQTLs), including their utility in interpreting GWAS variant mechanisms. We discuss the interrelated challenges and opportunities for eQTL analysis, covering determining causal variants, elucidating molecular mechanisms of action, and understanding context variability. Addressing these questions can enable better functional characterization of disease-associated loci and provide insights into fundamental biological questions of the noncoding genetic regulatory code and its control of gene expression.
Ämnesord
- MEDICIN OCH HÄLSOVETENSKAP -- Medicinska och farmaceutiska grundvetenskaper -- Medicinsk genetik (hsv//swe)
- MEDICAL AND HEALTH SCIENCES -- Basic Medicine -- Medical Genetics (hsv//eng)
Nyckelord
- genetic variant
- eQTL
- GWAS
- function
- context specificity
- mechanism
Publikations- och innehållstyp
- ref (ämneskategori)
- art (ämneskategori)
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