Screening for differentially expressed circRNA between Kashin–Beck disease and osteoarthritis patients based on circRNA chips

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Wang, YingDepartment of Orthopedics, The First Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, People's Republic of China (författare)

Screening for differentially expressed circRNA between Kashin–Beck disease and osteoarthritis patients based on circRNA chips

Artikel/kapitelEngelska2020

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Elsevier,2020
printrdacarrier

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LIBRIS-ID:oai:DiVA.org:umu-164943
https://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-164943URI
https://doi.org/10.1016/j.cca.2019.10.026DOI

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Språk:engelska
Sammanfattning på:engelska

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Objective: This research aims to explore differentially expressed circRNA between OA and KBD and potential diagnostic biomarkers.Methods: Total RNA was extracted from 5 pairs of KBD and OA knee joint cartilage specimens, and the expression of circRNAs was analyzed by Chip Scanning Analysis. The microarray data was verified by quantitative polymerase chain reaction (qRT-PCR). CircRNA-miRNA network was constructed to predict targeting microRNAs of circRNA genes. Peripheral blood samples from 25 KBD patients and 25 OA patients were collected for verification by qRT-PCR. Diagnostic value was evaluated by the area under the receiver operator characteristic (ROC) curve.Results: A total of 1627 circRNAs were differentially expressed between OA and KBD. Five bone and joint disease-related circRNAs were chosen for qRT-PCR validation. The difference in expression profile of hsa_circRNA_0020014 was confirmed by qRT-PCR, and its circRNA-miRNA regulation network was set up. The ROC curve demonstrated that hsa_circ_0020014_CBC1 in peripheral blood could distinguish patients with KBD and OA.Conclusion: The expression profiles of circRNA were significantly different between OA and KBD. hsa_circRNA_0020014 is a potential biomarker for differential diagnosis between these two diseases.

Ämnesord och genrebeteckningar

MEDICIN OCH HÄLSOVETENSKAP Klinisk medicin Klinisk laboratoriemedicin hsv//swe
MEDICAL AND HEALTH SCIENCES Clinical Medicine Clinical Laboratory Medicine hsv//eng
MEDICIN OCH HÄLSOVETENSKAP Klinisk medicin Reumatologi och inflammation hsv//swe
MEDICAL AND HEALTH SCIENCES Clinical Medicine Rheumatology and Autoimmunity hsv//eng
Kashin–Beck disease
biomarkers
circRNAs expression profiles
osteoarthritis
Clinical Chemistry
klinisk kemi
reumatologi
rheumatology

Biuppslag (personer, institutioner, konferenser, titlar ...)

Wu, CuiyanSchool of Public Health, Health Science Center of Xi'an Jiaotong University, NHC Key Laboratory of Trace Elements and Endemic Diseases, Xi'an Jiaotong University, Xi'an, People's Republic of China (författare)
Zhang, YananSchool of Public Health, Health Science Center of Xi'an Jiaotong University, NHC Key Laboratory of Trace Elements and Endemic Diseases, Xi'an Jiaotong University, Xi'an, People's Republic of China (författare)
Yang, YiminDepartment of Orthopedics, The First Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, People's Republic of China (författare)
Ren, ZhiweiDepartment of Orthopedics, The First Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, People's Republic of China (författare)
Lammi, Mikko J.,1961-Umeå universitet,Institutionen för integrativ medicinsk biologi (IMB),School of Public Health, Health Science Center of Xi'an Jiaotong University, NHC Key Laboratory of Trace Elements and Endemic Diseases, Xi'an Jiaotong University, Xi'an, People's Republic of China,Chondrogenic and Osteogenic Differentiation(Swepub:umu)mila0077 (författare)
Guo, XiongSchool of Public Health, Health Science Center of Xi'an Jiaotong University, NHC Key Laboratory of Trace Elements and Endemic Diseases, Xi'an Jiaotong University, Xi'an, People's Republic of China (författare)
Department of Orthopedics, The First Affiliated Hospital of Xi'an Jiao Tong University, Xi'an, People's Republic of ChinaSchool of Public Health, Health Science Center of Xi'an Jiaotong University, NHC Key Laboratory of Trace Elements and Endemic Diseases, Xi'an Jiaotong University, Xi'an, People's Republic of China (creator_code:org_t)

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Ingår i:Clinica Chimica Acta: Elsevier501, s. 92-1010009-89811873-3492

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Av författaren/redakt...: Wang, Ying; Wu, Cuiyan; Zhang, Yanan; Yang, Yimin; Ren, Zhiwei; Lammi, Mikko J., ...; visa fler...; Guo, Xiong; visa färre...

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