Sökning: onr:"swepub:oai:lup.lub.lu.se:0790a52f-a49a-4ce1-8689-4191f21881f2" > PED in 2021 : A maj...
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000 | 06781naa a2200793 4500 | |
001 | oai:lup.lub.lu.se:0790a52f-a49a-4ce1-8689-4191f21881f2 | |
003 | SwePub | |
008 | 211012s2021 | |||||||||||000 ||eng| | |
024 | 7 | a https://lup.lub.lu.se/record/0790a52f-a49a-4ce1-8689-4191f21881f22 URI |
024 | 7 | a https://doi.org/10.1093/nar/gkaa10212 DOI |
040 | a (SwePub)lu | |
041 | a engb eng | |
042 | 9 SwePub | |
072 | 7 | a art2 swepub-publicationtype |
072 | 7 | a ref2 swepub-contenttype |
100 | 1 | a Lazar, Tamasu Vrije Universiteit Brussel (VUB),Flanders Interuniversity Institute for Biotechnology4 aut |
245 | 1 0 | a PED in 2021 : A major update of the protein ensemble database for intrinsically disordered proteins |
264 | c 2020-12-10 | |
264 | 1 | b Oxford University Press (OUP),c 2021 |
300 | a 8 s. | |
520 | a The Protein Ensemble Database (PED) (https://proteinensemble.org), which holds structural ensembles of intrinsically disordered proteins (IDPs), has been significantly updated and upgraded since its last release in 2016. The new version, PED 4.0, has been completely redesigned and reimplemented with cutting-edge technology and now holds about six times more data (162 versus 24 entries and 242 versus 60 structural ensembles) and a broader representation of state of the art ensemble generation methods than the previous version. The database has a completely renewed graphical interface with an interactive feature viewer for region-based annotations, and provides a series of descriptors of the qualitative and quantitative properties of the ensembles. High quality of the data is guaranteed by a new submission process, which combines both automatic and manual evaluation steps. A team of biocurators integrate structured metadata describing the ensemble generation methodology, experimental constraints and conditions. A new search engine allows the user to build advanced queries and search all entry fields including cross-references to IDP-related resources such as DisProt, MobiDB, BMRB and SASBDB. We expect that the renewed PED will be useful for researchers interested in the atomic-level understanding of IDP function, and promote the rational, structure-based design of IDP-targeting drugs. | |
650 | 7 | a NATURVETENSKAPx Kemix Teoretisk kemi0 (SwePub)104072 hsv//swe |
650 | 7 | a NATURAL SCIENCESx Chemical Sciencesx Theoretical Chemistry0 (SwePub)104072 hsv//eng |
700 | 1 | a Martínez-Pérez, Elizabethu Fundación Instituto Leloir,European Molecular Biology Laboratory Heidelberg4 aut |
700 | 1 | a Quaglia, Federicau University of Padova4 aut |
700 | 1 | a Hatos, Andrásu University of Padova4 aut |
700 | 1 | a Chemes, Lucía B.u National University of General San Martín4 aut |
700 | 1 | a Iserte, Javier A.u Fundación Instituto Leloir4 aut |
700 | 1 | a Méndez, Nicolás A.u National University of General San Martín4 aut |
700 | 1 | a Garrone, Nicolás A.u National University of General San Martín4 aut |
700 | 1 | a Saldaño, Tadeo E.u Quilmes National University4 aut |
700 | 1 | a Marchetti, Juliau Quilmes National University4 aut |
700 | 1 | a Rueda, Ana Julia Velezu Quilmes National University4 aut |
700 | 1 | a Bernadó, Pauu University of Montpellier4 aut |
700 | 1 | a Blackledge, Martinu University Grenoble Alpes4 aut |
700 | 1 | a Cordeiro, Tiago N.u University of Montpellier,NOVA University Lisbon4 aut |
700 | 1 | a Fagerberg, Ericu Lund University,Lunds universitet,Beräkningskemi,Enheten för fysikalisk och teoretisk kemi,Kemiska institutionen,Institutioner vid LTH,Lunds Tekniska Högskola,Computational Chemistry,Physical and theoretical chemistry,Department of Chemistry,Departments at LTH,Faculty of Engineering, LTH4 aut0 (Swepub:lu)er5636fa |
700 | 1 | a Forman-Kay, Julie D.u Hospital for Sick Children, Toronto,University of Toronto4 aut |
700 | 1 | a Fornasari, Maria S.u Quilmes National University4 aut |
700 | 1 | a Gibson, Toby J.u European Molecular Biology Laboratory Heidelberg4 aut |
700 | 1 | a Gomes, Gregory Neal W.u University of Toronto4 aut |
700 | 1 | a Gradinaru, Claudiu C.u University of Toronto4 aut |
700 | 1 | a Head-Gordon, Teresau University of California, Berkeley4 aut |
700 | 1 | a Jensen, Malene Ringkjøbingu University Grenoble Alpes4 aut |
700 | 1 | a Lemke, Edward A.u Johannes-Gutenberg University Mainz4 aut |
700 | 1 | a Longhi, Soniau Aix-Marseille University4 aut |
700 | 1 | a Marino-Buslje, Cristinau Fundación Instituto Leloir4 aut |
700 | 1 | a Minervini, Giovanniu University of Padova4 aut |
700 | 1 | a Mittag, Tanjau St Jude Children´s Research Hospital, Memphis4 aut |
700 | 1 | a Monzon, Alexander Miguelu University of Padova4 aut |
700 | 1 | a Pappu, Rohit V.u Washington University in St. Louis4 aut |
700 | 1 | a Parisi, Gustavou Quilmes National University4 aut |
700 | 1 | a Ricard-Blum, Sylvieu Institute for Molecular and Supramolecular Chemistry and Biochemistry (ICBMS)4 aut |
700 | 1 | a Ruff, Kiersten M.u Washington University in St. Louis4 aut |
700 | 1 | a Salladini, Edoardou Architecture et Fonction des Macromolécules Biologiques (AFMB)4 aut |
700 | 1 | a Skepö, Marieu Lund University,Lunds universitet,Beräkningskemi,Enheten för fysikalisk och teoretisk kemi,Kemiska institutionen,Institutioner vid LTH,Lunds Tekniska Högskola,LINXS - Institute of advanced Neutron and X-ray Science,Computational Chemistry,Physical and theoretical chemistry,Department of Chemistry,Departments at LTH,Faculty of Engineering, LTH,Faculty of Engineering, LTH4 aut0 (Swepub:lu)fk1-mjo |
700 | 1 | a Svergun, Dmitriu European Molecular Biology Laboratory Hamburg4 aut |
700 | 1 | a Vallet, Sylvain D.u Institute for Molecular and Supramolecular Chemistry and Biochemistry (ICBMS)4 aut |
700 | 1 | a Varadi, Mihalyu European Bioinformatics Institute4 aut |
700 | 1 | a Tompa, Peteru Vrije Universiteit Brussel (VUB),Flanders Interuniversity Institute for Biotechnology,Research Centre for Natural Sciences of the Hungarian Academy of Sciences4 aut |
700 | 1 | a Tosatto, Silvio C.E.u University of Padova4 aut |
700 | 1 | a Piovesan, Damianou University of Padova4 aut |
710 | 2 | a Vrije Universiteit Brussel (VUB)b Flanders Interuniversity Institute for Biotechnology4 org |
773 | 0 | t Nucleic Acids Researchd : Oxford University Press (OUP)g 49:D1, s. 404-411q 49:D1<404-411x 0305-1048x 1362-4962 |
856 | 4 | u https://academic.oup.com/nar/article-abstract/49/D1/D404/6030232x freey FULLTEXT |
856 | 4 | u http://dx.doi.org/10.1093/nar/gkaa1021x freey FULLTEXT |
856 | 4 | u https://doi.org/10.1093/nar/gkaa1021 |
856 | 4 8 | u https://lup.lub.lu.se/record/0790a52f-a49a-4ce1-8689-4191f21881f2 |
856 | 4 8 | u https://doi.org/10.1093/nar/gkaa1021 |
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