| 1. |
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- 2019
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Journal article (peer-reviewed)
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| 2. |
- Kattge, Jens, et al.
(author)
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TRY plant trait database - enhanced coverage and open access
- 2020
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In: Global Change Biology. - : Wiley-Blackwell. - 1354-1013 .- 1365-2486. ; 26:1, s. 119-188
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Journal article (peer-reviewed)abstract
- Plant traits-the morphological, anatomical, physiological, biochemical and phenological characteristics of plants-determine how plants respond to environmental factors, affect other trophic levels, and influence ecosystem properties and their benefits and detriments to people. Plant trait data thus represent the basis for a vast area of research spanning from evolutionary biology, community and functional ecology, to biodiversity conservation, ecosystem and landscape management, restoration, biogeography and earth system modelling. Since its foundation in 2007, the TRY database of plant traits has grown continuously. It now provides unprecedented data coverage under an open access data policy and is the main plant trait database used by the research community worldwide. Increasingly, the TRY database also supports new frontiers of trait-based plant research, including the identification of data gaps and the subsequent mobilization or measurement of new data. To support this development, in this article we evaluate the extent of the trait data compiled in TRY and analyse emerging patterns of data coverage and representativeness. Best species coverage is achieved for categorical traits-almost complete coverage for 'plant growth form'. However, most traits relevant for ecology and vegetation modelling are characterized by continuous intraspecific variation and trait-environmental relationships. These traits have to be measured on individual plants in their respective environment. Despite unprecedented data coverage, we observe a humbling lack of completeness and representativeness of these continuous traits in many aspects. We, therefore, conclude that reducing data gaps and biases in the TRY database remains a key challenge and requires a coordinated approach to data mobilization and trait measurements. This can only be achieved in collaboration with other initiatives.
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| 3. |
- Bernhardt, Paul V., et al.
(author)
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Tailoring mixed-valence Co-III/Fe-II complexes for their potential use as sensitizers in dye sensitized solar cells
- 2008
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In: New Journal of Chemistry. - : Royal Society of Chemistry (RSC). - 1144-0546 .- 1369-9261. ; 32:4, s. 705-711
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Journal article (peer-reviewed)abstract
- Dinuclear class II Co-III/Fe-II mixed-valence complexes of type [LnCo (III)(mu-NC) Fe-II(CN)(3)L-2](m-) (where L-n represents a pentadentate macrocycle and L-2 a bpy ligand or two cyanides) have electronic properties that make them possible sensitizers in DSSC ( dye sensitized solar cells). For this purpose the new complex Na-2[{trans-L14COOCo III( m-NC)} Fe II( CN) 5] has been prepared and characterized by the usual methods and its sensitizer properties compared with those of the already known [{trans-L14COOCo (III)(mu-NC)}Fe-II(CN)(5)](2-)(CN)(3)(bipy)(eq,ax)](ClO4). The complex [{trans-L14COOCo (III)(mu-NC)}Fe-II(CN)(5)](2-) has been designed for the actuation of an electron injection from the cobalt centre on MMCT, while the [{trans-L14COOCo (III)(mu-NC)}Fe-II(CN)(3)(bipy)](+) structure can produce a tuned injection from the iron centre via an MLCT electronic state, as described for similar systems. The characterization on solid oxide semiconductor supports has been carried out for these two complexes and the results have been compared with the behaviour observed in aqueous solution and in solvents of varying polarities. Their use in DSSC has been checked and, while a sensitizer response is observed for [{trans-L14COOCo (III)(mu-NC)}Fe-II(CN)(5)](2-), complex [{trans-L14COOCoIII(mu-NC)}Fe-II(CN)(3)(bipy)(eq,ax)](+) does not produce any electrical current on illumination. The low efficiency of the built DSSC can be easily related both with the very low value of the extinction coefficient of the MMCT band responsible for the electron injection, and with the small driving force for the reduction of the complex with the standard I-2/I-3 (-) system used after electron injection.
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| 4. |
- Doherty, Gareth G., et al.
(author)
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Synthesis of Uronic Acid 1-Azasugars as Putative Inhibitors of α-Iduronidase, β-Glucuronidase and Heparanase
- 2023
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In: ChemBioChem. - : Wiley-VCH Verlagsgesellschaft. - 1439-4227 .- 1439-7633. ; 24:4
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Journal article (peer-reviewed)abstract
- 1-Azasugar analogues of l-iduronic acid (l-IdoA) and d-glucuronic acid (d-GlcA) and their corresponding enantiomers have been synthesized as potential pharmacological chaperones for mucopolysaccharidosis I (MPS I), a lysosomal storage disease caused by mutations in the gene encoding α-iduronidase (IDUA). The compounds were efficiently synthesized in nine or ten steps from d- or l-arabinose, and the structures were confirmed by X-ray crystallographic analysis of key intermediates. All compounds were inactive against IDUA, although l-IdoA-configured 8 moderately inhibited β-glucuronidase (β-GLU). The d-GlcA-configured 9 was a potent inhibitor of β-GLU and a moderate inhibitor of the endo-β-glucuronidase heparanase. Co-crystallization of 9 with heparanase revealed that the endocyclic nitrogen of 9 forms close interactions with both the catalytic acid and catalytic nucleophile.
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| 5. |
- Steen, Robert O., 1978-, et al.
(author)
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Bis-cyclometallated Molecular Switches Based on 4,7-phenantroline and 1,5-naphthyridine Architecture
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Other publication (other academic/artistic)abstract
- Two new bis-terdentate ligands, 3,8-bis-(6-thiophen-2-yl-pyridin-2-yl)-[4,7]phenanthroline (L1) and 2,6-bis(6-(thiophen-2-yl)pyridin-2-yl)-1,5-naphthyridine (L2), capable of reversible double cyclometallation have been synthesized. Both syntheses proceeded via a Skraup synthesis followed by Stille cross-coupling with 2-thiophen-2-yl-6-tributylstannylpyridine to yield the final product. The Ru2(tpy)2-complex of L1 was shown to be capable of reversible cyclometallation, where the bis-cyclometallated (C,C) isomer of the complex had an oxidation potential of +249 mV while the oxidation potential of the doubly S-coordinated (S,S) complex was +987 mV. No ground state interaction between the Ru cores was however found. In theory the complex should display a third, mixed, state. An S,C-coordinated isomer would open the way for molecular electronic applications based on ternary logic. However, despite attempts the S,C-coordinated complex could not be generated.
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| 6. |
- Steen, Robert O., 1978-, et al.
(author)
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Coordination-mode pH-activated Molecular Switches based on Ruthenium(II) Oligopyridine Complex Architecture
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Other publication (other academic/artistic)abstract
- A number of [Ru(tpy)L] complexes (where L is a ligand based on the 6-thien-2-yl-2,2’-bipyridine motif) have been generated to study the ability of this terdentate motif to switch between a N,N,C and a N,N,S binding mode as a function of pH and irradiation. Whilst the parent system 6-thien-2-yl-2,2’-bipyridine (1) displayed facile switching between the orange and purple forms, heavier analogues displayed sluggish switching – most likely resulting from a large moment of inertia about the bond between the S/C-bonded thiophene ring and the chelating bipyridine unit. Prototypic unsymmetrical bimetallic complexes (C7S and C7C) have been generated in order to test if the binding mode of the switching unit can affect the oxidation potential of the remote [Ru(bpy)2(L)] unit. The results of cyclic voltammetry studies suggest that only weak electronic coupling between the metal cores exists, and that the coordination mode (N,N,C or N,N,S) of the thiophene moiety only has a small effect on the oxidation potential of the [Ru(bpy)2(L)] unit.
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| 7. |
- Steen, Robert O., 1978-, et al.
(author)
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Synthesis of the Pyridyl Thienopyridine Ligands 5-phenyl-7-(pyridin-2-yl)-thieno[2,3-c]pyridine, 7-(pyridin-2-yl)-5-(thiophen-2-yl)thieno[2,3-c]pyridine and 5,7-di(pyridin-2-yl)thieno[2,3-c]pyridine via the Hurtley Reaction
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Other publication (other academic/artistic)abstract
- The tridentate thienopyridines 5-phenyl-7-(pyridin-2-yl)thieno[2,3-c]pyridine (L1), 7-(pyridin-2-yl)-5-(thiophen-2-yl)thieno[2,3-c]pyridine (L2) and 5,7-di(pyridin-2-yl)thieno[2,3-c]pyridine (L3) have been synthesized via the Hurtley reaction. L1 and L2 were synthesized by condensing 3-bromothiophene-2-carboxylic acid with phenyl-1,3-butanedione and 1-thienyl-1,3-butanedione respectively. L3 was synthesized by condensing 3-bromothiophene-2- carboxylic acid with benzoylacetonitrile. Ring closure and a subsequent Negishi or Stille cross-coupling afforded L1, L2 and L3 in an overall yield of 20%, 3% and 6% respectively. The corresponding [Ru(tpy)L]n+ complexes were prepared and their electrochemical and structural properties were examined.
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| 8. |
- Steen, Robert O., et al.
(author)
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The role of isomeric effects on the luminescence lifetimes and electrochemistry of oligothienyl-bridged dinuclear tris(2,2′-bipyridine) ruthenium(II) complexes
- 2008
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In: European Journal of Inorganic Chemistry. - : Wiley. - 1434-1948 .- 1099-0682. ; :11, s. 1784-1794
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Journal article (peer-reviewed)abstract
- The luminescence lifetimes (in CH 3CN at room temperature) and electrochemical potentials (in CH 3CN) of a range of mono- and bis(bidentate) 2,2′-bipyridine-capped oligothiophene-bridged Ru II complexes based on the 6-(2-thienyl)-2,2′-bipyridine and 4-(2-thienyl)-2,2′-bipyridine motifs have been measured. The redox potentials occurred in a very narrow range and showed only small shifts from that of [Ru(bpy) 3] 2+, which indicates that the inductive effects of the substituents on the 2,2′-bipyridine ligands are very similar across this series. In the complexes that incorporated a bithiophene moiety the oxidation of the bithienyl group occurred at higher potentials than the metal-centered Ru III/II oxidation. No or very weak interaction between the metal cores in the dinuclear complexes was observed. It was found that the luminescence lifetimes of the complexes where the attachment point of the oligothiophene bridge is in the 4-position of a 2,2′-bipyridine ligand were extended compared to [Ru(bpy) 3] 2+, whereas the luminescence was very short-lived (<30 ns) or completely quenched in the complexes where the oligothiophene bridge was attached in the 6-position. The difference in lifetimes is probably due to steric interactions between the thienyl bridge and the auxiliary bipyridyl ligands, resulting in disturbances in coordination symmetry of the metal core.
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