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- Derrien, M., et al.
(author)
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Fasting breath H-2 and gut microbiota metabolic potential are associated with the response to a fermented milk product in irritable bowel syndrome
- 2019
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In: Plos One. - : Public Library of Science (PLoS). - 1932-6203. ; 14:4
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Journal article (peer-reviewed)abstract
- Objectives Aim of this study was to assess the effect of a fermented milk product containing Bifidobacterium lactis CNCM I-2494 (FMP) on gastrointestinal (GI) symptoms and exhaled H-2 and CH4 during a nutrient and lactulose challenge in patients with irritable bowel syndrome (IBS). We included 125 patients with IBS (Rome III). Fasted subjects were served a 400ml liquid test meal containing 25g lactulose. The intensity of eight GI symptoms and the amount of exhaled H-2 and CH4 were assessed before and during 4h after meal intake. The challenge was repeated after 14 days consumption of FMP or a control product in a double-blind, randomized, parallel design. The metabolic potential of fecal microbiota was profiled using 16S MiSeq analysis of samples obtained before and after the intervention. 106 patients with IBS were randomized. No difference between FMP or control groups was found on GI symptoms or breath H-2 and CH4 in the whole cohort. A post-hoc analysis in patients stratified according to their fasting H-2 levels showed that in high H-2 producers (fasting H-2 level >= 10ppm, n = 35), FMP consumption reduced fasting H-2 levels (p = 0.003) and H-2 production during the challenge (p = 0.002) and tended to decrease GI discomfort (p = 0.05) vs. control product. The Prevotella /Bacteroides metabolic potential at baseline was higher in high H-2 producers (p<0.05) vs. low H-2 producers and FMP consumption reduced this ratio (p<0.05) vs. control product. The response to a fermented milk product containing Bifidobacterium lactis CNCM I-2494 (FMP) in patients with IBS seems to be associated with the metabolic potential of the gut microbiota.
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- Le Nevé, B, et al.
(author)
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Lactulose Challenge Determines Visceral Sensitivity and Severity of Symptoms in Patients With Irritable Bowel Syndrome.
- 2016
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In: Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association. - : Elsevier BV. - 1542-7714 .- 1542-3565. ; 14:2
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Journal article (peer-reviewed)abstract
- Patients with irritable bowel syndrome (IBS) can be assigned to groups with different gastrointestinal (GI) symptoms based on results from a combined nutrient and lactulose challenge. We aimed to identify factors that predict outcomes to this challenge and to determine whether this can be used in non-invasive assessment of visceral sensitivity in patients with IBS.
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- Plassais, Jocelyn, et al.
(author)
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Natural and human-driven selection of a single non-coding body size variant in ancient and modern canids
- 2022
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In: Current Biology. - : Elsevier BV. - 0960-9822 .- 1879-0445. ; 32:4, s. 889-897
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Journal article (peer-reviewed)abstract
- Domestic dogs (Canis lupus familiaris) are the most variable-sized mammalian species on Earth, displaying a 40-fold size difference between breeds.1 Although dogs of variable size are found in the archeological record,2, 3, 4 the most dramatic shifts in body size are the result of selection over the last two centuries, as dog breeders selected and propagated phenotypic extremes within closed breeding populations.5 Analyses of over 200 domestic breeds have identified approximately 20 body size genes regulating insulin processing, fatty acid metabolism, TGFβ signaling, and skeletal formation.6, 7, 8, 9, 10 Of these, insulin-like growth factor 1 (IGF1) predominates, controlling approximately 15% of body size variation between breeds.8 The identification of a functional mutation associated with IGF1 has thus far proven elusive.6,10,11 Here, to identify and elucidate the role of an ancestral IGF1 allele in the propagation of modern canids, we analyzed 1,431 genome sequences from 13 species, including both ancient and modern canids, thus allowing us to define the evolutionary history of both ancestral and derived alleles at this locus. We identified a single variant in an antisense long non-coding RNA (IGF1-AS) that interacts with the IGF1 gene, creating a duplex. While the derived mutation predominates in both modern gray wolves and large domestic breeds, the ancestral allele, which predisposes to small size, was common in small-sized breeds and smaller wild canids. Our analyses demonstrate that this major regulator of canid body size nearly vanished in Pleistocene wolves, before its recent resurgence resulting from human-imposed selection for small-sized breed dogs.
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- Thivet, Simon, et al.
(author)
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Evidences of Plug Pressurization Enhancing Magma Fragmentation During the September 2016 Basaltic Eruption at Piton de la Fournaise (La Réunion Island, France)
- 2020
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In: Geochemistry, Geophysics, Geosystems. - 1525-2027. ; 21:2
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Journal article (peer-reviewed)abstract
- In September 2016, Piton de la Fournaise volcano, well known for its effusive and Hawaiian fountaining activity, produced, at the end of the eruption, an unusual phase of pulsating ash and bomb emission. Integration of geophysical data, with textural and petrological analysis of the samples, allowed us to constrain the main factors that controlled this sudden shift in activity, potentially dangerous for the tourist population that usually approach these “gentle” eruptive sites. Volcanic tremor, lava discharge rates, fountain heights, and SO2 emission changed rapidly during the eruption. Grain size and componentry of the tephra beds evolved from unimodal all along the sequence to bimodal on the last day of the activity, reflecting the contribution of both Hawaiian fountaining at the main vent (Vent A) and transient explosive activity at the second vent (Vent B). Hawaiian fountaining produced highly vesicular and almost microlite-free tephra (golden pumice and fluidal scoria) while transient explosive activity emitted denser and crystal-rich tephra (sideromelane and tachylite scoria) sometimes mingled with vesicular fragments. Permeability measurements on lapilli and bomb-sized samples reveal that golden pumice and fluidal scoria were more gas-permeable than the sideromelane and tachylite ones, while textural and chemical analyses of the ash support the hypothesis that these sideromelane and tachylite components were inherited from the subsurface crystallization of the initial golden pumice and fluidal scoria components. We thus suggest that Vent B accumulated a plug of degassed, cooled, and low-permeable magma, which modulated overpressure pulses under the late input of ascending magma.
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- Wei, L., et al.
(author)
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Nitric oxide-triggered remodeling of chloroplast bioenergetics and thylakoid proteins upon nitrogen starvation in Chlamydomonas reinhardtii
- 2014
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In: The Plant Cell. - : Oxford University Press (OUP). - 1040-4651 .- 1532-298X. ; 26:1, s. 353-372
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Journal article (peer-reviewed)abstract
- Starving microalgae for nitrogen sources is commonly used as a biotechnological tool to boost storage of reduced carbon into starch granules or lipid droplets, but the accompanying changes in bioenergetics have been little studied so far. Here, we report that the selective depletion of Rubisco and cytochrome b6f complex that occurs when Chlamydomonas reinhardtii is starved for nitrogen in the presence of acetate and under normoxic conditions is accompanied by a marked increase in chlororespiratory enzymes, which converts the photosynthetic thylakoid membrane into an intracellular matrix for oxidative catabolism of reductants. Cytochrome b6f subunits and most proteins specifically involved in their biogenesis are selectively degraded, mainly by the FtsH and Clp chloroplast proteases. This regulated degradation pathway does not require light, active photosynthesis, or state transitions but is prevented when respiration is impaired or under phototrophic conditions. We provide genetic and pharmacological evidence that NO production from intracellular nitrite governs this degradation pathway: Addition of a NO scavenger and of two distinct NO producers decrease and increase, respectively, the rate of cytochrome b6f degradation; NO-sensitive fluorescence probes, visualized by confocal microscopy, demonstrate that nitrogen-starved cells produce NO only when the cytochrome b6f degradation pathway is activated.
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