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1.	Segal, E, et al. (author) Publisher Correction: Building an international consortium for tracking coronavirus health status 2020 In: Nature medicine. - : Springer Science and Business Media LLC. - 1546-170X .- 1078-8956. ; 26:8, s. 1309-1309 Journal article (peer-reviewed)
2.	Alneberg, Johannes, et al. (author) Analysis of genome sequencing data with a minimal investment IT-infrastructure 2019 In: European Journal of Human Genetics. - : NATURE PUBLISHING GROUP. - 1018-4813 .- 1476-5438. ; 27, s. 1706-1706 Journal article (other academic/artistic)
3.	Renevey, A, et al. (author) Implementing RNA-fusion detection in routine cancer diagnostics 2023 In: EUROPEAN JOURNAL OF HUMAN GENETICS. - 1018-4813. ; 31, s. 608-608 Conference paper (other academic/artistic)
4.	Brack, P., et al. (author) Ten simple rules for making a software tool workflow-ready 2022 In: PloS Computational Biology. - : Public Library of Science (PLoS). - 1553-734X .- 1553-7358. ; 18:3 Journal article (other academic/artistic)
5.	Bassett, Andrew R., et al. (author) Understanding functional miRNA-target interactions in vivo by site-specific genome engineering 2014 In: Nature Communications. - : Springer Science and Business Media LLC. - 2041-1723. ; 5, s. 4640- Journal article (peer-reviewed)abstract MicroRNA (miRNA) target recognition is largely dictated by short 'seed' sequences, and single miRNAs therefore have the potential to regulate a large number of genes. Understanding the contribution of specific miRNA-target interactions to the regulation of biological processes in vivo remains challenging. Here we use transcription activator-like effector nuclease (TALEN) and clustered regularly interspaced short palindromic repeat (CRISPR)/Cas9 technologies to interrogate the functional relevance of predicted miRNA response elements (MREs) to post-transcriptional silencing in zebrafish and Drosophila. We also demonstrate an effective strategy that uses CRISPR-mediated homology-directed repair with short oligonucleotide donors for the assessment of MRE activity in human cells. These methods facilitate analysis of the direct phenotypic consequences resulting from blocking specific miRNA-MRE interactions at any point during development.
6.	Gran, C., et al. (author) Phased WGS by direct library preparation from 240 FACS sorted cells for comprehensive genetics in multiple myeloma 2020 In: European Journal of Human Genetics. - : SPRINGERNATURE. - 1018-4813 .- 1476-5438. ; 28:SUPPL 1, s. 605-606 Journal article (other academic/artistic)

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Type of publication: journal article (5); conference paper (1)

Type of content: other academic/artistic (4); peer-reviewed (2)

Author/Editor: Proks, M. (2); Zhang, F. (1); Davidson, N. (1); Owen, S. (1); Spector, T (1); Kallioniemi, O (1); show more...; Garcia, M. (1); Wirta, V (1); Gustafsson, C (1); Nahi, H (1); Gran, C (1); Taylor, Stephen (1); Orešič, Matej, 1967- (1); Ponting, Chris P. (1); Lindstrand, A (1); Peterson, H (1); Lin, XH (1); Alneberg, Johannes (1); Garcia, M. U. (1); Peltzer, A. (1); Koch, T. (1); Wilm, A. (1); Ewels, P. A. (1); Vilo, J (1); Cohen, O. (1); Sauka-Spengler, Tatj ... (1); Geiger, B. (1); Anders, S. (1); Evans, G (1); Ewels, Philip (1); Lowe, D (1); Goble, C. (1); Segal, E. (1); Stevens, I (1); Bassett, Andrew R. (1); Azzam, Ghows (1); Wheatley, Lucy (1); Tibbit, Charlotte (1); Rajakumar, Timothy (1); McGowan, Simon (1); Stanger, Nathan (1); Ewels, Philip Andrew (1); Liu, Ji-Long (1); Fulga, Tudor A. (1); Nguyen, LH (1); Dor, Y (1); Muller, A (1); Olsen, R. (1); Mansson, R (1); Chan, AT (1); show less...

University: Karolinska Institutet (4); Royal Institute of Technology (2); Stockholm University (2); Örebro University (1)

Language: English (6)

Research subject (UKÄ/SCB): Natural sciences (4); Medical and Health Sciences (1)

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