| 1. |
- Krause, Gesche, et al.
(author)
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A revolution without people? Closing the people-policy gap in aquaculture development
- 2015
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In: Aquaculture. - : Elsevier BV. - 0044-8486 .- 1873-5622. ; 447, s. 44-55
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Research review (peer-reviewed)abstract
- Failure of the blue revolutionis a global risk. The international problem is that there is a gap in knowledge exchange between the aquaculture industry, policy makers trying to support aquaculture development and people who depend on aquaculture for a job and/or food source. Thus, governments and international organizations promoting aquaculture as the solution to improving food security, nutrition and income are failing to optimise production of natural aquatic resources. We identify a people-policy gap, and suggest that this is an understudied constraint, which needs to be overcome before worldwide food security can be achieved from aquatic environments. We argue that this gap leads to uneven distribution of benefits, a disconnection between benefits and local needs, and detrimental effects on human health and food security, all of which can have negative repercussions on human communities and ecosystems. In order to address this need, we present an analytical framework to guide context specific, policy-relevant assessments of the social, economic and ecological dimensions of aquaculture on a case-by-case basis. The framework is designed to make best use of existing data and scientific tools for decision-making. In conclusion, we argue for: equal consideration of ecological, social and economic issues in aquaculture policy-making; pre-emptive identification of likely social impacts; integration of people-and context-specific social framing conditions into planning and policy review; addressing the social disconnection between global consumption and production; and, encouragement of creative combinations of theories and methods to assess and interpret the social dimensions of aquaculture in multiple contexts.
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| 2. |
- Bejarano, Sonia, et al.
(author)
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The shape of success in a turbulent world : wave exposure filtering of coral reef herbivory
- 2017
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In: Functional Ecology. - : Wiley. - 0269-8463 .- 1365-2435. ; 31:6, s. 1312-1324
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Research review (peer-reviewed)abstract
- While environmental filters are well-known factors influencing community assembly, the extent to which these modify species functions, and entire ecosystem processes, is poorly understood. Focusing on a high-diversity system, we ask whether environmental filtering has ecosystem-wide effects beyond community assembly. We characterise a coral reef herbivorous fish community for swimming performance based on ten functional traits derived from fish morphology. We then investigate whether wave exposure modifies the functional make-up of herbivory, and the absolute and relative feeding frequency of distinct feeding functional groups. Herbivorous fish species conformed to either laterally compressed or fusiform body plans, which differ in their morphological design to minimise drag. High wave exposure selectively limited the feeding function of the deepest body shapes with highest caudal thrust efficiency, and favoured fusiform bodies irrespective of pectoral fin shape. Traditionally recognised herbivore feeding functional groups (i.e. grazers-detritivores and scrapers-small excavators) differed in swimming performance, and in their capacity to feed consistently across levels of wave exposure. We therefore emphasise the distinctness of their ecological niche and functional complementarity. Species within the same feeding functional group also had contrasting responses to wave exposure. We thereby reveal a further ecological dimension of niche partitioning, and reiterate the risk of assuming functional redundancy among species with a common feeding mode. Contrasting responses of species within feeding functional roles (i.e. response diversity) allowed the preservation of critical trophic functions throughout the gradient (e.g. macroalgal browsing), and likely explained why overall levels of herbivory were robust to filtering. Whether ecosystem functioning will remain robust under the additive effects of environmental stress and human-induced disturbances remains to be tested.
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| 3. |
- Demichev, Vadim, et al.
(author)
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A time-resolved proteomic and prognostic map of COVID-19
- 2021
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In: Cell Systems. - : Elsevier BV. - 2405-4712 .- 2405-4720. ; 12:8, s. 780-794.e7
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Journal article (peer-reviewed)abstract
- COVID-19 is highly variable in its clinical presentation, ranging from asymptomatic infection to severe organ damage and death. We characterized the time-dependent progression of the disease in 139 COVID-19 inpatients by measuring 86 accredited diagnostic parameters, such as blood cell counts and enzyme activities, as well as untargeted plasma proteomes at 687 sampling points. We report an initial spike in a systemic inflammatory response, which is gradually alleviated and followed by a protein signature indicative of tissue repair, metabolic reconstitution, and immunomodulation. We identify prognostic marker signatures for devising risk-adapted treatment strategies and use machine learning to classify therapeutic needs. We show that the machine learning models based on the proteome are transferable to an independent cohort. Our study presents a map linking routinely used clinical diagnostic parameters to plasma proteomes and their dynamics in an infectious disease.
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| 4. |
- Eich, Andreas, et al.
(author)
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Positive association between epiphytes and competitiveness of the brown algal genus Lobophora against corals
- 2019
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In: PeerJ. - : PeerJ. - 2167-8359. ; 7
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Journal article (peer-reviewed)abstract
- Observations of coral-algal competition can provide valuable information about the state of coral reef ecosystems. Here, we report contact rates and apparent competition states for six shallow lagoonal reefs in Fiji. A total of 81.4% of examined coral perimeters were found to be in contact with algae, with turf algae (54.7%) and macroalgae of the genus Lobophora (16.8%) representing the most frequently observed contacts. Turf algae competitiveness was low, with 21.8% of coral-turf contacts being won by the algae (i.e. overgrowth or bleaching of coral tissue). In contrast, Lobophora competitiveness against corals was high, with 62.5% of contacts being won by the alga. The presence of epiphytic algae on Lobophora was associated with significantly greater algal competitiveness against corals, with 75.8% and 21.1% of interactions recorded as algal wins in the presence and absence of epiphytes, respectively. Sedimentation rate, herbivorous fish biomass, and coral colony size did not have a significant effect on Lobophora-coral interactions. This research indicates a novel and important role of epiphytes in driving the outcome of coral-algal contacts.
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| 5. |
- Ford, Amanda K., et al.
(author)
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Local Human Impacts Disrupt Relationships Between Benthic Reef Assemblages and Environmental Predictors
- 2020
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In: Frontiers in Marine Science. - : Frontiers Media SA. - 2296-7745. ; 7
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Journal article (peer-reviewed)abstract
- Human activities are changing ecosystems at an unprecedented rate, yet large-scale studies into how local human impacts alter natural systems and interact with other aspects of global change are still lacking. Here we provide empirical evidence that local human impacts fundamentally alter relationships between ecological communities and environmental drivers. Using tropical coral reefs as a study system, we investigated the influence of contrasting levels of local human impact using a spatially extensive dataset spanning 62 outer reefs around inhabited Pacific islands. We tested how local human impacts (low versus high determined using a threshold of 25 people km(-2) reef) affected benthic community (i) structure, and (ii) relationships with environmental predictors using pre-defined models and model selection tools. Data on reef depth, benthic assemblages, and herbivorous fish communities were collected from field surveys. Additional data on thermal stress, storm exposure, and market gravity (a function of human population size and reef accessibility) were extracted from public repositories. Findings revealed that reefs subject to high local human impact were characterised by relatively more turf algae (>10% higher mean absolute coverage) and lower live coral cover (9% less mean absolute coverage) than reefs subject to low local human impact, but had similar macroalgal cover and coral morphological composition. Models based on spatio-physical predictors were significantly more accurate in explaining the variation of benthic assemblages at sites with low (mean adjusted-R-2 = 0.35) rather than high local human impact, where relationships became much weaker (mean adjusted-R-2 = 0.10). Model selection procedures also identified a distinct shift in the relative importance of different herbivorous fish functional groups in explaining benthic communities depending on the local human impact level. These results demonstrate that local human impacts alter natural systems and indicate that projecting climate change impacts may be particularly challenging at reefs close to higher human populations, where dependency and pressure on ecosystem services are highest.
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| 6. |
- McAndrews, Ryan S., et al.
(author)
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Algae sediment dynamics are mediated by herbivorous fishes on a nearshore coral reef
- 2019
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In: Coral reefs (Print). - : Springer Science and Business Media LLC. - 0722-4028 .- 1432-0975. ; 38:3, s. 431-441
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Journal article (peer-reviewed)abstract
- Epilithic algae are a ubiquitous component of coral reefs. Components of the epilithic algal matrix (EAM) can have a significant influence on coral settlement and benthic feeding by fishes. We employed a herbivore exclusion experiment on a fringing reef in Viti Levu, Fiji, to investigate the functional role of herbivorous fishes in affecting the EAM between different habitat types and levels of community-based fishing restriction. We surveyed the herbivorous fish community and deployed experimental tiles on the reef flat and lagoonal slope and inside and outside of an area where fishing is restricted (tabu). Tiles were deployed for 3months, half within cages to exclude herbivorous fishes. We then identified algal type and quantified epilithic algal turf height, sediment dry weight, and detritus within the EAM on each tile. EAM that developed under herbivory was remarkably similar, regardless of the differences in habitat or fishing restriction. In contrast, EAM within cages was characterised by longer turf, heavier sediment load, and high variance in turf length and sediment load. Habitat type played a strong role in determining EAM characteristics where herbivores were excluded. Caged EAM on the reef flat was characterised by algal turf and fleshy macroalgae, whereas EAM in cages on the lagoonal slope was overwhelmingly dominated by filamentous and mat-forming cyanobacteria. The results presented here demonstrate the importance of herbivorous fishes in maintaining a benthic environment favourable to coral settlement and survival. Our results suggest that herbivore biomass per se is not a reliable predictor of foraging activity. Moreover, these results show that the absence of herbivore foraging can have different consequences depending on the habitat type, even within the same reef.
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