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- Andersson, Anders, et al.
(author)
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A transcriptional timetable of autumn senescence
- 2004
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In: Genome Biology. - : Springer Science and Business Media LLC. - 1465-6906 .- 1474-760X. ; 5:4, s. R24-
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Journal article (peer-reviewed)abstract
- Background We have developed genomic tools to allow the genus Populus (aspens and cottonwoods) to be exploited as a full-featured model for investigating fundamental aspects of tree biology. We have undertaken large-scale expressed sequence tag (EST) sequencing programs and created Populus microarrays with significant gene coverage. One of the important aspects of plant biology that cannot be studied in annual plants is the gene activity involved in the induction of autumn leaf senescence. Results On the basis of 36,354 Populus ESTs, obtained from seven cDNA libraries, we have created a DNA microarray consisting of 13,490 clones, spotted in duplicate. Of these clones, 12,376 (92%) were confirmed by resequencing and all sequences were annotated and functionally classified. Here we have used the microarray to study transcript abundance in leaves of a free-growing aspen tree (Populus tremula) in northern Sweden during natural autumn senescence. Of the 13,490 spotted clones, 3,792 represented genes with significant expression in all leaf samples from the seven studied dates. Conclusions We observed a major shift in gene expression, coinciding with massive chlorophyll degradation, that reflected a shift from photosynthetic competence to energy generation by mitochondrial respiration, oxidation of fatty acids and nutrient mobilization. Autumn senescence had much in common with senescence in annual plants; for example many proteases were induced. We also found evidence for increased transcriptional activity before the appearance of visible signs of senescence, presumably preparing the leaf for degradation of its components.
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| 2. |
- Axelson, Sigbert & Gustafsson, Ove
(author)
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Well organized openness in Rome. Notes on some archives in Rome and Torre Pellice
- 1998
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In: The Wisdom of Rome. Report from a Field Study to Rome 1998. - : The Swedish Institute of Missionary Research, Uppsala. ; , s. 183-190
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Journal article (other academic/artistic)abstract
- För missionsforskare har de olika arkiven i Rom sedan generationer varit ovärderliga, stundom svårtillgängliga. Påven Johannes Paulus II har under sitt pontifikat verkat för en öppnare attityd till vetenskaplig historisk forskning, bl a som ett led i Rom
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| 5. |
- Axner, Ove, et al.
(author)
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A discussion about the significance of absorbance and sample optical thickness in conventional absorption spectrometry and wavelength-modulated laser absorption spectrometry
- 2003
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In: Spectrochimica Acta Part B - Atomic Spectroscopy. - : Elsevier. - 0584-8547 .- 1873-3565. ; 58:11, s. 1997-2014
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Journal article (peer-reviewed)abstract
- One of the most frequently used concepts in atomic absorption spectrometry (AAS) is that of Absorbance, an easily measurable quantity that is linear with the concentration of the analyte over a large range of concentrations whenever Beer's law is valid. Laser-based modulation techniques, however, in particular wavelength modulated diode laser absorption spectrometry (WMAS), do not measure exactly the same physical quantities as conventional AAS techniques do, since they do not rely upon separate measurements of the intensities in the presence and in the absence of the sample, but rather (a certain fraction of) the difference between the signals 'on' and 'off' resonance. Hence, Absorbance is not as natural for the modulated laser-based absorption techniques as it is for the conventional AAS techniques. The entity called sample optical thickness (SOT) appears to be a natural entity as well as a natural unit (denoted SOT units) for the quantification of signals in WMAS. The present paper discusses the concept of measurable quantities and their units in WMAS in some detail and compares them (theoretical and practical considerations) with those of conventional AAS. In particular, it makes a distinction between the 'observed' sample optical thickness and the 'true' sample optical thickness and shows how these two entities are related to the Absorbance entity. Finally, this work also introduces a dimensionless sensitivity of the WMAS technique, and shows this quantity to be equal to the nth Fourier coefficient of the wavelength modulated, peak-normalized line shape function.
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| 7. |
- Axner, Ove, et al.
(author)
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Absorption spectrometry by narrowband light in optically saturated and optically pumped collision and doppler broadened gaseous media under arbitrary optical thickness conditions
- 2006
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In: Applied Spectroscopy. - New York : Society for applied spectroscopy. - 0003-7028 .- 1943-3530. ; 60:11, s. 1217-1240
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Journal article (peer-reviewed)abstract
- This work examines absorption spectrometry by narrowband light in gaseous media with arbitrary optical thickness when the light induces optical saturation or optical pumping. Two quantities are defined: the observed absorbance, Aobs, and the true absorbance, Atrue. The former is the absorbance that is measured under the existing conditions, whereas the latter represents the absorbance one would measure if the light acted solely as a probe of the populations of the various levels, and it is therefore directly proportional to the concentration or density of absorbers. A general integral equation for the propagation of light in media of arbitrary optical thickness in which the light influences the populations of the levels involved is derived. This expression is transcendental in the observed absorbance and cannot be solved analytically. It is shown that an analytical expression can be derived by investigating the inverse relationship, i.e., Atrue = f(Aobs). Inasmuch as collision and Doppler broadened media react differently to optical saturation, they are considered separately. It is shown that a nonlinear response results if the medium is optically saturated (or pumped) and not optically thin. Expressions for the error introduced if the technique of standard additions is uncritically applied to such a system are derived.
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| 8. |
- Axner, Ove, et al.
(author)
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Authors’ reply
- 2004
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In: Spectrochimica Acta, Part B. ; 59:3, s. 390-392
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Journal article (peer-reviewed)
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