| 1. |
- Bhat, Goutam, et al.
(author)
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NTIRE 2022 Burst Super-Resolution Challenge
- 2022
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In: 2022 IEEE/CVF CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION WORKSHOPS (CVPRW 2022). - : IEEE. - 9781665487399 - 9781665487405 ; , s. 1040-1060
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Conference paper (peer-reviewed)abstract
- Burst super-resolution has received increased attention in recent years due to its applications in mobile photography. By merging information from multiple shifted images of a scene, burst super-resolution aims to recover details which otherwise cannot be obtained using a simple input image. This paper reviews the NTIRE 2022 challenge on burst super-resolution. In the challenge, the participants were tasked with generating a clean RGB image with 4x higher resolution, given a RAW noisy burst as input. That is, the methods need to perform joint denoising, demosaicking, and super-resolution. The challenge consisted of 2 tracks. Track 1 employed synthetic data, where pixel-accurate high-resolution ground truths are available. Track 2 on the other hand used real-world bursts captured from a handheld camera, along with approximately aligned reference images captured using a DSLR. 14 teams participated in the final testing phase. The top performing methods establish a new state-of-the-art on the burst super-resolution task.
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| 2. |
- Suiter, Chase C., et al.
(author)
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Massively parallel variant characterization identifies NUDT15 alleles associated with thiopurine toxicity
- 2020
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In: Proceedings of the National Academy of Sciences of the United States of America. - : Proceedings of the National Academy of Sciences. - 0027-8424 .- 1091-6490. ; 117:10, s. 5394-5401
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Journal article (peer-reviewed)abstract
- As a prototype of genomics-guided precision medicine, individualized thiopurine dosing based on pharmacogenetics is a highly effective way to mitigate hematopoietic toxicity of this class of drugs. Recently, NUDT15 deficiency was identified as a genetic cause of thiopurine toxicity, and NUDT15-informed preemptive dose reduction was quickly adopted in clinical settings. To exhaustively identify pharmacogenetic variants in this gene, we developed massively parallel NUDT15 function assays to determine the variants' effect on protein abundance and thiopurine cytotoxicity. Of the 3,097 possible missense variants, we characterized the abundance of 2,922 variants and found 54 hotspot residues at which variants resulted in complete loss of protein stability. Analyzing 2,935 variants in the thiopurine cytotoxicity-based assay, we identified 17 additional residues where variants altered NUDT15 activity without affecting protein stability. We identified structural elements key to NUDT15 stability and/or catalytical activity with single amino acid resolution. Functional effects for NUDT15 variants accurately predicted toxicity risk alleles in patients treated with thiopurines with far superior sensitivity and specificity compared to bioinformatic prediction algorithms. In conclusion, our massively parallel variant function assays identified 1,152 deleterious NUDT15 variants, providing a comprehensive reference of variant function and vastly improving the ability to implement pharmacogenetics-guided thiopurine treatment individualization.
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| 3. |
- Guo, Pengzhi, et al.
(author)
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Twisted Alkylthiothien-2-yl Flanks and Extended Conjugation Length Synergistically Enhanced Photovoltaic Performance by Boosting Dielectric Constant and Carriers Kinetic Characteristics
- 2021
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In: Macromolecular Chemistry and Physics. - : Wiley. - 1022-1352 .- 1521-3935. ; 222:12
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Journal article (peer-reviewed)abstract
- Alternating conjugated polymers (CPs), derived from 2-ethylhexylthiothiophen-2-yl (TS) or 2-ethylhexylthiophen-2-yl (T) flanked dithieno[3,2-d:3,2-d ']benzo[1,2-b:4,5-b ']dithiophene (DTBDT) and diketopyrrolo-pyrrole (DPP) termed as PDTBDT-TS-DPP and PDTBDT-T-DPP, are prepared and characterized. It is found that the PDTBDT-TS-DPP not only exhibits slightly deepening the highest occupied molecular orbital energy levels, and similar absorption, etc., but also presents higher dielectric constant (epsilon(r)) of 6.7 at 1 kHz in contrast to 3.2 for PDTBDT-T-DPP, which are even higher than those of 4.3 and 3.0 for PBDT-TS-DPP/PBDT-T-DPP generated from TS and T flanked benzo[1,2-b:4,5-bMODIFIER LETTER PRIME]dithiophene and DPP. Beyond that, the power conversion efficiency of 8.17% for the inverted photovoltaic devices from DPP-based CPs, is achieved from PDTBDT-TS-DPP. The alkylthio side chains are used in the DTBDT of the larger twisting angles of TS flanks and longer conjugation length, synergistically contribute to the highest dipole moments, and then lead to the enhancement of epsilon(r), thus devoted the modification exciton dissociation and charge carriers kinetic characteristics. To the authors' knowledge, it is the first time to report that epsilon(r) of the CPs is connected with the twisting angle of flanks and conjugation length of the building blocks, besides the use of functional side chains and atoms.
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| 4. |
- Hering, Alessa, et al.
(author)
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Learn2Reg: comprehensive multi-task medical image registration challenge, dataset and evaluation in the era of deep learning
- 2023
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In: IEEE Transactions on Medical Imaging. - : Institute of Electrical and Electronics Engineers (IEEE). - 0278-0062 .- 1558-254X. ; 42:3, s. 697-712
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Journal article (peer-reviewed)abstract
- Image registration is a fundamental medical image analysis task, and a wide variety of approaches have been proposed. However, only a few studies have comprehensively compared medical image registration approaches on a wide range of clinically relevant tasks. This limits the development of registration methods, the adoption of research advances into practice, and a fair benchmark across competing approaches. The Learn2Reg challenge addresses these limitations by providing a multi-task medical image registration data set for comprehensive characterisation of deformable registration algorithms. A continuous evaluation will be possible at https:// learn2reg.grand-challenge.org. Learn2Reg covers a wide range of anatomies (brain, abdomen, and thorax), modalities (ultrasound, CT, MR), availability of annotations, as well as intra- and inter-patient registration evaluation. We established an easily accessible framework for training and validation of 3D registration methods, which enabled the compilation of results of over 65 individual method submissions from more than 20 unique teams. We used a complementary set of metrics, including robustness, accuracy, plausibility, and runtime, enabling unique insight into the current state-of-the-art of medical image registration. This paper describes datasets, tasks, evaluation methods and results of the challenge, as well as results of further analysis of transferability to new datasets, the importance of label supervision, and resulting bias. While no single approach worked best across all tasks, many methodological aspects could be identified that push the performance of medical image registration to new state-of-the-art performance. Furthermore, we demystified the common belief that conventional registration methods have to be much slower than deep-learning-based methods.
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| 5. |
- Li, Jiayang, et al.
(author)
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Electrochemical Zintl Cluster Bi22− induced chemically bonded bismuth / graphene oxide composite for sodium-ion batteries
- 2022
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In: Electrochimica Acta. - : Elsevier BV. - 0013-4686 .- 1873-3859. ; 413
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Journal article (peer-reviewed)abstract
- Bismuth, a promising attribute for sodium-ion batteries, which have been attracting significant attention owing to their advantages of high volumetric capacity and suitable operating potential. However, most traditional Bi-based materials are suffered from pulverization and fracture of the electrodes caused by dramatic volume variation, consequently diminishing the cycle stability. Herein, in this work, bismuth embedded within graphene oxide matrices have been obtained by utilizing a novel and efficient electrochemical method. Through the strong reducing properties of Zintl clusters Bi22−, GO is partially reduced to generate reduced graphene oxide with better electrical conductivity. Simultaneously, Bi is strongly loaded on the GO through Bi-O-C bonding, which can form Bi2O22+ with excellent ionic conductivity. Moreover, the volume expansion of Bi during sodiation can be effectively buffered in the GO matrices. As a result, this Bi/GO composite exhibits excellent electrochemical performances in sodium-ion batteries (SIBs), including a high specific capacity of 258 mAh g−1 at 10 A g−1 and an excellent cycle stability with high retained capacity of 315 mAh g−1 after 500 cycles at 2 A g−1. This work paves the way to prepare designated promising electrode materials for high-performance SIBs, and thoroughly understands mechanism of electrochemical methods for preparing materials.
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| 6. |
- Liang, Jiamin, et al.
(author)
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A phylogenetic framework of Palaearctic and Indomalayan Limacodidae (Lepidoptera, Zygaenoidea) based on sequence capture data
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In: Systematic Entomology. - 0307-6970.
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Journal article (peer-reviewed)abstract
- The slug moth family Limacodidae is a cosmopolitan group of economic importance, but its higher level systematics remains poorly understood. Here, we present a robust, higher level phylogenetic framework for Palaearctic and Indomalayan members of the family using sequence capture data of 148 nuclear protein-coding and 13 mitochondrial markers from 145 samples of 126 species in 67 genera representing all five morphologically delineated limacodid lineages. Our results strongly support the monophyly of Limacodidae in which six major clades are recognized. The relationships among these clades are revealed, with Phrixolepia-clade being the most basal group followed by Apoda-clade, Euphlyctinides-clade, Cania-clade and Phlossa-clade + Parasa-clade, respectively. We also add publicly available DNA barcode sequences from additional species worldwide to this phylogenetic framework to infer the most completely sampled phylogeny of Limacodidae to date. Our work provides a major step towards understanding the systematics and evolution of slug moths.
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| 7. |
- Ma, Dan, et al.
(author)
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Creep-erosion coupling water inrush model of weakly cemented fault rock mass
- 2023
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In: Meitan Xuebao/Journal of the China Coal Society. - : China Coal Society. - 0253-9993. ; 48:6, s. 2453-2464
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Journal article (peer-reviewed)abstract
- In order to investigate the temporal-spatial evolution properties of the water inrush disaster process of weakly cemented fault rock mass, a creep-erosion coupling water inrush model of weakly cemented fault rock mass is established. This model expands the equivalent continuum seepage theory, and a creep submodel and an erosion submodel are established respectively. The proposed creep submodel fully considers the mass conversion among materials, stress-strain and strain-porosity relationships. The proposed erosion submodel fully considers the mass conservation, particle migration and non-Darcy flow laws. According to the superposition principle of the mass conservation equations and three influence relationships (i.e., porosity-effective stress, porosity-creep material coefficient and creep strain-porosity-permeability relationships), the coupling between the submodels is realized, and the governing equations of the one-dimensional radial seepage direction coupling model are given. The solution conditions of the water inrush model are set, and the numerical computation method of the model in the temporal-spatial domain is established based on the COMSOL Multiphysics. By comparing the laboratory experimental results and the model calculation results of porosity evolution, the validity of the creep-erosion coupling model of weakly cemented surrounding rock is verified. On this basis, the temporal-spatial evolution law of the creep-erosion characteristics of weakly cemented surrounding rocks of the roadway is solved and analyzed. The calculated results show that in terms of the creep characteristics evolution, the effective stress decreases and the creep strain increases with time, and the samples exhibit the accelerated creep characteristics. The inhomogeneity of the spatial distribution of effective stress and creep strain increases with the creep-erosion coupling process. As for the evolution of the erosion characteristics, in the initial stage of the creep-erosion coupling process, the fine rock particles migrate out continuously under the effect of water flow, the volume fraction of fluidized particles, the permeability and flow velocity continuously increase, and new water-conducting channels are constantly formed in the weakly cemented rock mass. Subsequently, the erosion effect is weakened and finally stagnates due to the increasing creep effect. The closer to the inner wall of the roadway, the stronger the erosion effect. The spatial distribution of porosity and permeability after the stagnation of erosion shows obvious inhomogeneous characteristics, and the spatial distribution of water pressure presents a nonlinear-linear-nonlinear trend in the creep-erosion coupling process.
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| 8. |
- Wilkinson, Jack, et al.
(author)
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Protocol for the development of a tool (INSPECT-SR) to identify problematic randomised controlled trials in systematic reviews of health interventions
- 2024
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In: BMJ Open. - : BMJ Publishing Group Ltd. - 2044-6055. ; 14:3
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Journal article (peer-reviewed)abstract
- Introduction Randomised controlled trials (RCTs) inform healthcare decisions. It is now apparent that some published RCTs contain false data and some appear to have been entirely fabricated. Systematic reviews are performed to identify and synthesise all RCTs that have been conducted on a given topic. While it is usual to assess methodological features of the RCTs in the process of undertaking a systematic review, it is not usual to consider whether the RCTs contain false data. Studies containing false data therefore go unnoticed and contribute to systematic review conclusions. The INveStigating ProblEmatic Clinical Trials in Systematic Reviews (INSPECT-SR) project will develop a tool to assess the trustworthiness of RCTs in systematic reviews of healthcare-related interventions.Methods and analysis The INSPECT-SR tool will be developed using expert consensus in combination with empirical evidence, over five stages: (1) a survey of experts to assemble a comprehensive list of checks for detecting problematic RCTs, (2) an evaluation of the feasibility and impact of applying the checks to systematic reviews, (3) a Delphi survey to determine which of the checks are supported by expert consensus, culminating in, (4) a consensus meeting to select checks to be included in a draft tool and to determine its format and (5) prospective testing of the draft tool in the production of new health systematic reviews, to allow refinement based on user feedback. We anticipate that the INSPECT-SR tool will help researchers to identify problematic studies and will help patients by protecting them from the influence of false data on their healthcare.Ethics and dissemination The University of Manchester ethics decision tool was used, and this returned the result that ethical approval was not required for this project (30 September 2022), which incorporates secondary research and surveys of professionals about subjects relating to their expertise. Informed consent will be obtained from all survey participants. All results will be published as open-access articles. The final tool will be made freely available.
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| 9. |
- Zhang, Shuangshuang, et al.
(author)
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Narrow-gap, semiconducting, superhard amorphous carbon with high toughness, derived from C60 fullerene
- 2021
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In: Cell Reports Physical Science. - : Elsevier. - 2666-3864. ; 2:9
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Journal article (peer-reviewed)abstract
- New carbon forms that exhibit extraordinary physicochemical properties can be generated from nanostructured precursors under extreme pressure. Nevertheless, synthesis of such fascinating materials is often not well understood. That is the case of the C60 precursor, with irreproducible results that impede further progress in the materials design. Here, the semiconducting amorphous carbon, having band gaps of 0.1–0.3 eV and the advantages of isotropic superhardness and superior toughness over single-crystal diamond and inorganic glasses, is produced from fullerene at high pressure and moderate temperatures. A systematic investigation of the structure and bonding evolution is carried out with complementary characterization methods, which helps to build a model of the transformation that can be used in further high-pressure/high-temperature (high p,T) synthesis of novel nano-carbon systems for advanced applications. The amorphous carbon materials produced have the potential of accomplishing the demanding optoelectronic applications that diamond and graphene cannot achieve.
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| 10. |
- Feng, Kui, et al.
(author)
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Fused Bithiophene Imide Dimer-Based n-Type Polymers for High-Performance Organic Electrochemical Transistors
- 2021
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In: Angewandte Chemie International Edition. - : WILEY-V C H VERLAG GMBH. - 1433-7851 .- 1521-3773. ; 60:45, s. 24198-24205
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Journal article (peer-reviewed)abstract
- The development of n-type organic electrochemical transistors (OECTs) lags far behind their p-type counterparts. In order to address this dilemma, we report here two new fused bithiophene imide dimer (f-BTI2)-based n-type polymers with a branched methyl end-capped glycol side chain, which exhibit good solubility, low-lying LUMO energy levels, favorable polymer chain orientation, and efficient ion transport property, thus yielding a remarkable OECT electron mobility (mu(e)) of up to approximate to 10(-2) cm(2) V-1 s(-1) and volumetric capacitance (C*) as high as 443 F cm(-3), simultaneously. As a result, the f-BTI2TEG-FT-based OECTs deliver a record-high maximum geometry-normalized transconductance of 4.60 S cm(-1) and a maximum mu C* product of 15.2 F cm(-1) V-1 s(-1). The mu C* figure of merit is more than one order of magnitude higher than that of the state-of-the-art n-type OECTs. The emergence of f-BTI2TEG-FT brings a new paradigm for developing high-performance n-type polymers for low-power OECT applications.
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