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| 2. |
- Akhdhar, Abdullah, et al.
(författare)
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The use of high resolution graphite furnace molecular absorption spectrometry (HR -MAS) for total fluorine determination in extractable organofluorines (EOF)
- 2020
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Ingår i: Talanta. - : Elsevier BV. - 0039-9140 .- 1873-3573. ; 209
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Tidskriftsartikel (refereegranskat)abstract
- The determination of total fluorine content using high-resolution graphite furnace continuum source molecular absorption spectrometry (HR- MAS) has been employed in a variety of samples for over 10 years. However, most of the samples analysed by HR-MAS are rich in fluoride, with negligible levels of organic fluorinated species. With an increase in concern surrounding per- and polyfluoroalkyl substances (PFASs), new methods to measure total fluorine of organofluorine using different techniques have been developed. However, no studies focused on PFASs behaviour in HR-MAS have been performed. As these compounds encompass a wide range of different structures, boiling points, decomposition temperatures and matrix interactions, a loss of accuracy can occur when an aqueous external calibration is performed using only one compound. To overcome this issue, an investigation into permanent modifiers for the graphite furnace was performed. After optimisation similar sensitivity for different PFCA was achieved when 400 mu g of W was used as a permanent modifier together with an optimised temperature program. The relative deviation between the different PFCA standard slopes relative to the PFOA slope was lower than 15%. The instrumental limit of detection and quantification (LOD and LOQ, respectively) of total fluorine as total PFCA was 0.1 mg L-1 and 0.3 mg L-1, respectively, while the method LOD and LOQ (using solid phase extraction) was 0.3 mu g L-1 and 1.0 mu g L-1, respectively. The developed method gave satisfactory recoveries for the spiked PFCA into seawater, river water and effluent using PFOA calibration standards. The optimised method is useful for measuring extractable organofluorines (EOF) when only ionic PFASs such as PFCA are expected. When other organofluorines are expected, the results using HR GF-MAS should be taken with caution.
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| 3. |
- Alviano, Mario, et al.
(författare)
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The fourth answer set programming competition : Preliminary report
- 2013
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Ingår i: Logic Programming and Nonmonotonic Reasoning. - Berlin, Heidelberg : Springer. - 9783642405631 ; , s. 42-53
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Konferensbidrag (refereegranskat)abstract
- Answer Set Programming is a well-established paradigm of declarative programming in close relationship with other declarative formalisms such as SAT Modulo Theories, Constraint Handling Rules, PDDL and many others. Since its first informal editions, ASP systems are compared in the nowadays customary ASP Competition. The fourth ASP Competition, held in 2012/2013, is the sequel to previous editions and it was jointly organized by University of Calabria (Italy) and the Vienna University of Technology (Austria). Participants competed on a selected collection of benchmark problems, taken from a variety of research areas and real world applications. The Competition featured two tracks: the Model& Solve Track, held on an open problem encoding, on an open language basis, and open to any kind of system based on a declarative specification paradigm; and the System Track, held on the basis of fixed, public problem encodings, written in a standard ASP language.
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| 4. |
- Amare, Azmeraw, et al.
(författare)
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Association of Polygenic Score and the involvement of Cholinergic and Glutamatergic Pathways with Lithium Treatment Response in Patients with Bipolar Disorder.
- 2023
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Ingår i: Research square. - : Research Square Platform LLC.
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Tidskriftsartikel (refereegranskat)abstract
- Lithium is regarded as the first-line treatment for bipolar disorder (BD), a severe and disabling mental disorder that affects about 1% of the population worldwide. Nevertheless, lithium is not consistently effective, with only 30% of patients showing a favorable response to treatment. To provide personalized treatment options for bipolar patients, it is essential to identify prediction biomarkers such as polygenic scores. In this study, we developed a polygenic score for lithium treatment response (Li+PGS) in patients with BD. To gain further insights into lithium's possible molecular mechanism of action, we performed a genome-wide gene-based analysis. Using polygenic score modeling, via methods incorporating Bayesian regression and continuous shrinkage priors, Li+PGS was developed in the International Consortium of Lithium Genetics cohort (ConLi+Gen: N=2,367) and replicated in the combined PsyCourse (N=89) and BipoLife (N=102) studies. The associations of Li+PGS and lithium treatment response - defined in a continuous ALDA scale and a categorical outcome (good response vs. poor response) were tested using regression models, each adjusted for the covariates: age, sex, and the first four genetic principal components. Statistical significance was determined at P<����������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������������.
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| 5. |
- Amare, Azmeraw T, et al.
(författare)
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Association of polygenic score and the involvement of cholinergic and glutamatergic pathways with lithium treatment response in patients with bipolar disorder.
- 2023
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Ingår i: Molecular psychiatry. - 1476-5578. ; 28, s. 5251-5261
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Tidskriftsartikel (refereegranskat)abstract
- Lithium is regarded as the first-line treatment for bipolar disorder (BD), a severe and disabling mental healthdisorder that affects about 1% of the population worldwide. Nevertheless, lithium is not consistently effective, with only 30% of patients showing a favorable response to treatment. To provide personalized treatment options for bipolar patients, it is essential to identify prediction biomarkers such as polygenic scores. In this study, we developed a polygenic score for lithium treatment response (Li+PGS) in patients with BD. To gain further insights into lithium's possible molecular mechanism of action, we performed a genome-wide gene-based analysis. Using polygenic score modeling, via methods incorporating Bayesian regression and continuous shrinkage priors, Li+PGS was developed in the International Consortium of Lithium Genetics cohort (ConLi+Gen: N=2367) and replicated in the combined PsyCourse (N=89) and BipoLife (N=102) studies. The associations of Li+PGS and lithium treatment response - defined in a continuous ALDA scale and a categorical outcome (good response vs. poor response) were tested using regression models, each adjusted for the covariates: age, sex, and the first four genetic principal components. Statistical significance was determined at P<0.05. Li+PGS was positively associated with lithium treatment response in the ConLi+Gen cohort, in both the categorical (P=9.8×10-12, R2=1.9%) and continuous (P=6.4×10-9, R2=2.6%) outcomes. Compared to bipolar patients in the 1st decile of the risk distribution, individuals in the 10th decile had 3.47-fold (95%CI: 2.22-5.47) higher odds of responding favorably to lithium. The results were replicated in the independent cohorts for the categorical treatment outcome (P=3.9×10-4, R2=0.9%), but not for the continuous outcome (P=0.13). Gene-based analyses revealed 36 candidate genes that are enriched in biological pathways controlled by glutamate and acetylcholine. Li+PGS may be useful in the development of pharmacogenomic testing strategies by enabling a classification of bipolar patients according to their response to treatment.
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| 6. |
- Bjarnason, Elizabeth, et al.
(författare)
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Integrating Requirements Engineering with Software Development - A Research Abstract
- 2012
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Ingår i: ICB Research Reports. - 1860-2770. ; :46
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Konferensbidrag (refereegranskat)abstract
- Software development companies operating in market-driven domains need to deliver new and appealing software products at an increasing rate in order to stay competitive. This requires fast and efficient development of software for which the requirements are based on ever-changing market demands. Agile development claims to achieve increased development efficiency by performing the requirements engineering (RE) activities concurrently with design, planning and testing in an integrated fashion. However, coordination and communication is often reported as a challenge both for agile and for traditional RE practices. Increased insight into the factors affected by integrating RE may allow tailoring the degree of RE integration to suit specific project context, e.g. size, rate of requirements change, domain etc., and thereby support increased efficiency in software development. The aim of this research is to develop methods for assessing the level of RE integration and techniques for improving the integration of requirements. The research is performed in collaboration with industry and the developed methods and techniques will be empirically evaluated in an industrial setting.
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| 7. |
- Bomfleur, Benjamin, 1979-, et al.
(författare)
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From the Transantarctic Basin to the Ferrar Large Igneous Province: New palynostratigraphic age constraints for Triassic-Jurassic sedimentation and magmatism in East Antarctica
- 2014
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Ingår i: Review of Palaeobotany and Palynology. - : Elsevier. - 0034-6667 .- 1879-0615. ; 207, s. 18-37
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Tidskriftsartikel (refereegranskat)abstract
- We present new palynological data from the Transantarctic Mountains that clarify the timing of sedimentary and magmatic processes in the transition from continental deposition of the Beacon Supergroup to emplacement of the Ferrar Large Igneous Province. Samples were collected from twenty-three Triassic and Jurassic sections in the southern area of north Victoria Land (NVL), East Antarctica. Recovered palynomorph assemblages are correlated with the widely used, although informal palynostratigraphic framework established for eastern Australia by Price. The associated Late Triassic–earliest Jurassic zone, APT5, is modified here with a proposed new subdivision: Lower APT5 (“APT5L”; middle–late Norian), Middle APT5 (“APT5M”; Rhaetian), and Upper APT5 (“APT5U”;Hettangian–earliest Sinemurian). We further propose a modification unifying the relevant formal eastern Australian and New Zealand palynostratigraphic zones, with a new Polycingulatisporites crenulatus Association Zone (new zonal status) that includes the P. crenulatus Association Subzone (new subzone; equivalent toAPT5L) and the following Foveosporites moretonensis Association Subzone (new subzonal status; equivalent to APT5M). Our palynostratigraphic dating of the NVL assemblages demonstrates that the onset of sedimentation was diachronous in this part of the Transantarctic Basin, ranging from at least the Rhaetian to, in places, early Sinemurian. By lack of evidence for rocks containing APT5U assemblages and by analogy with the few coeval sections in Australia, we infer that the Hettangian interval in NVL is probably consumed by unconformity. Depositionof ashes from distal silicic volcanism commenced in the early Sinemurian and reached a peak phase beginning in middle Pliensbachian (ca 187Ma), coinciding with the first major magmatic interval of the silicic Chon Aike Province in Patagonia and West Antarctica. Two major episodes of phreatomagmatic activity, driven by shallow-level sill intrusion into sandstone aquifers, occurred during the middle Pliensbachian and during the late Pliensbachian–early Toarcian. The latter episode was closely followed by the first pillow extrusion and local lava effusion. Contrary to some previous studies, we further conclude that all available palynological evidence is compatible with a short-lived emplacement of the plateau-forming Kirkpatrick Basalt at around 180 Ma during the early Toarcian.
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| 8. |
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| 9. |
- Hamm, Alexandra, et al.
(författare)
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Intercomparison of Gridded Precipitation Datasets over a Sub-Region of the Central Himalaya and the Southwestern Tibetan Plateau
- 2020
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Ingår i: Water. - : MDPI AG. - 2073-4441. ; 12:11
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Tidskriftsartikel (refereegranskat)abstract
- Precipitation is a central quantity of hydrometeorological research and applications. Especially in complex terrain, such as in High Mountain Asia (HMA), surface precipitation observations are scarce. Gridded precipitation products are one way to overcome the limitations of ground truth observations. They can provide datasets continuous in both space and time. However, there are many products available, which use various methods for data generation and lead to different precipitation values. In our study we compare nine different gridded precipitation products from different origins (ERA5, ERA5-Land, ERA-interim, HAR v2 10 km, HAR v2 2 km, JRA-55, MERRA-2, GPCC and PRETIP) over a subregion of the Central Himalaya and the Southwest Tibetan Plateau, from May to September 2017. Total spatially averaged precipitation over the study period ranged from 411 mm (GPCC) to 781 mm (ERA-Interim) with a mean value of 623 mm and a standard deviation of 132 mm. We found that the gridded products and the few observations, with few exceptions, are consistent among each other regarding precipitation variability and rough amount within the study area. It became obvious that higher grid resolution can resolve extreme precipitation much better, leading to overall lower mean precipitation spatially, but higher extreme precipitation events. We also found that generally high terrain complexity leads to larger differences in the amount of precipitation between products. Due to the considerable differences between products in space and time, we suggest carefully selecting the product used as input for any research application based on the type of application and specific research question. While coarse products such as ERA-Interim or ERA5 that cover long periods but have coarse grid resolution have previously shown to be able to capture long-term trends and help with identifying climate change features, this study suggests that more regional applications, such as glacier mass-balance modeling, require higher spatial resolution, as is reproduced, for example, in HAR v2 10 km.
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| 10. |
- Kalman, Janos L, et al.
(författare)
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Investigating polygenic burden in age at disease onset in bipolar disorder: Findings from an international multicentric study.
- 2019
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Ingår i: Bipolar disorders. - : Wiley. - 1399-5618 .- 1398-5647. ; 21:1, s. 68-75
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Tidskriftsartikel (refereegranskat)abstract
- Bipolar disorder (BD) with early disease onset is associated with an unfavorable clinical outcome and constitutes a clinically and biologically homogenous subgroup within the heterogeneous BD spectrum. Previous studies have found an accumulation of early age at onset (AAO) in BD families and have therefore hypothesized that there is a larger genetic contribution to the early-onset cases than to late onset BD. To investigate the genetic background of this subphenotype, we evaluated whether an increased polygenic burden of BD- and schizophrenia (SCZ)-associated risk variants is associated with an earlier AAO in BD patients.A total of 1995 BD type 1 patients from the Consortium of Lithium Genetics (ConLiGen), PsyCourse and Bonn-Mannheim samples were genotyped and their BD and SCZ polygenic risk scores (PRSs) were calculated using the summary statistics of the Psychiatric Genomics Consortium as a training data set. AAO was either separated into onset groups of clinical interest (childhood and adolescence [≤18years] vs adulthood [>18years]) or considered as a continuous measure. The associations between BD- and SCZ-PRSs and AAO were evaluated with regression models.BD- and SCZ-PRSs were not significantly associated with age at disease onset. Results remained the same when analyses were stratified by site of recruitment.The current study is the largest conducted so far to investigate the association between the cumulative BD and SCZ polygenic risk and AAO in BD patients. The reported negative results suggest that such a polygenic influence, if there is any, is not large, and highlight the importance of conducting further, larger scale studies to obtain more information on the genetic architecture of this clinically relevant phenotype.
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