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1.	Klionsky, Daniel J, et al. (author) Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition). 2016 In: Autophagy. - : Informa UK Limited. - 1554-8635 .- 1554-8627. ; 12:1, s. 1-222 Journal article (peer-reviewed)
2.	Salva-Serra, Francisco, 1989, et al. (author) Comparative genomics of Stutzerimonas balearica (Pseudomonas balearica): diversity, habitats, and biodegradation of aromatic compounds 2023 In: Frontiers in Microbiology. - 1664-302X. ; 14 Journal article (peer-reviewed)abstract Stutzerimonas balearica (Pseudomonas balearica) has been found principally in oil-polluted environments. The capability of S. balearica to thrive from the degradation of pollutant compounds makes it a species of interest for potential bioremediation applications. However, little has been reported about the diversity of S. balearica. In this study, genome sequences of S. balearica strains from different origins were analyzed, revealing that it is a diverse species with an open pan-genome that will continue revealing new genes and functionalities as the genomes of more strains are sequenced. The nucleotide signatures and intra- and inter-species variation of the 16S rRNA genes of S. balearica were reevaluated. A strategy of screening 16S rRNA gene sequences in public databases enabled the detection of 158 additional strains, of which only 23% were described as S. balearica. The species was detected from a wide range of environments, although mostly from aquatic and polluted environments, predominantly related to petroleum oil. Genomic and phenotypic analyses confirmed that S. balearica possesses varied inherent capabilities for aromatic compounds degradation. This study increases the knowledge of the biology and diversity of S. balearica and will serve as a basis for future work with the species.
3.	Salvà-Serra, Francisco, 1989, et al. (author) Complete Multipartite Genome Sequence of the Cupriavidus basilensis Type Strain, a 2,6-Dichlorophenol-Degrading Bacterium 2021 In: Microbiology Resource Announcements. - : American Society for Microbiology. - 2576-098X. ; 10:19 Journal article (peer-reviewed)abstract We report the complete 8.94-Mb genome sequence of the type strain of Cupriavidus basilensis (DSM 11853(T) = CCUG 49340(T)= RK1(T)), formed by two chromo-somes and six putative plasmids, which offers insights into its chloroaromatic-biode-grading capabilities.

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Type of publication: journal article (3)

Type of content: peer-reviewed (3)

Author/Editor: Moore, Edward R.B. 1 ... (2); Zhang, Yan (1); Korhonen, Laura (1); Lindholm, Dan (1); Vertessy, Beata G. (1); Wang, Mei (1); show more...; Wang, Xin (1); Liu, Yang (1); Kumar, Rakesh (1); Wang, Dong (1); Li, Ke (1); Liu, Ke (1); Zhang, Yang (1); Nàgy, Péter (1); Kominami, Eiki (1); van der Goot, F. Gis ... (1); Bonaldo, Paolo (1); Thum, Thomas (1); Adams, Christopher M (1); Minucci, Saverio (1); Vellenga, Edo (1); Lee, K (1); Swärd, Karl (1); Nilsson, Per (1); De Milito, Angelo (1); Zhang, Jian (1); Shukla, Deepak (1); Kågedal, Katarina (1); Chen, Guoqiang (1); Liu, Wei (1); Cheetham, Michael E. (1); Sigurdson, Christina ... (1); Clarke, Robert (1); Zhang, Fan (1); Gonzalez-Alegre, Ped ... (1); Jin, Lei (1); Chen, Qi (1); Taylor, Mark J. (1); Romani, Luigina (1); Wang, Ying (1); Kumar, Ashok (1); Simons, Matias (1); Ishaq, Mohammad (1); Yang, Qian (1); Algül, Hana (1); Brest, Patrick (1); Simon, Hans-Uwe (1); Mograbi, Baharia (1); Florey, Oliver (1); Ström, Anna-Lena (1); show less...

University: University of Gothenburg (2); Umeå University (1); Stockholm University (1); Linköping University (1); Lund University (1); RISE (1); show more...; Karolinska Institutet (1); Swedish University of Agricultural Sciences (1); show less...

Language: English (3)

Research subject (UKÄ/SCB): Medical and Health Sciences (3); Natural sciences (2)

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