| 1. |
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| 2. |
- Alström, Per, Professor, et al.
(author)
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Systematics of the avian family Alaudidae using multilocus and genomic data
- 2023
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In: Avian Research. - : Elsevier BV. - 2053-7166. ; 14
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Journal article (peer-reviewed)abstract
- The family Alaudidae, larks, comprises 93–100 species (depending on taxonomy) that are widely distributed across Africa and Eurasia, with single species extending their ranges to North and northernmost South America and Australia. A decade-old molecular phylogeny, comprising ∼80% of the species, revealed multiple cases of parallel evolution and large variation in rates of morphological evolution, which had misled taxonomists into creating many non-monophyletic genera. Here, we reconstruct the phylogeny of the larks, using a dataset covering one mitochondrial and 16 nuclear loci and comprising all except one of the currently recognised species as well as several recently proposed new species (in total 133 taxa; not all loci available for all species). We provide additional support using genome-wide markers to infer a genus-level phylogeny based on near-complete generic sampling (in total 51 samples of 44 taxa across 40 species). Our results confirm the previous findings of rampant morphological convergence and divergence, and reveal new cases of paraphyletic genera. We propose a new subfamily classification, and also that the genus Mirafra is divided into four genera to produce a more balanced generic classification of the Alaudidae. Our study supports recently proposed species splits as well as some recent lumps, while also questioning some of the latter. This comprehensive phylogeny will form an important basis for future studies, such as comparative studies of lark natural history, ecology, evolution and conservation.
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| 3. |
- Wallensten, Anders, et al.
(author)
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Surveillance of influenza A virus in migratory waterfowl in northern Europe
- 2007
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In: Emerging Infectious Diseases. - 1080-6040 .- 1080-6059. - 1080-6040 ; 13:3, s. 404-411
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Journal article (peer-reviewed)abstract
- We conducted large-scale, systematic sampling of influenza type A virus in migratory waterfowl (mostly mallards [Anas platyrhynchos]) at Ottenby Bird Observatory, southeast Sweden. As with previous studies, we found a higher prevalence in fall than spring, and among juveniles compared with adults. However, in contrast to other studies, we found that prevalence in spring was sometimes high (mean 4.0%, highest 9.5%). This finding raises the possibility that ducks are capable of perpetuating influenza A virus of different subtypes and subtype combinations throughout the year and from 1 year to the next. Isolation of the H5 and H7 subtypes was common, which suggests risk for transmission to sensitive domestic animals such as poultry. We argue that wild bird screening can function as a sentinel system, and we give an example of how it could have been used to forecast a remote and deadly outbreak of influenza A in poultry.
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| 4. |
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| 5. |
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| 6. |
- Feng, Shaohong, et al.
(author)
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Dense sampling of bird diversity increases power of comparative genomics
- 2020
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In: Nature. - : Springer Science and Business Media LLC. - 0028-0836 .- 1476-4687. ; 587:7833
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Journal article (peer-reviewed)abstract
- Whole-genome sequencing projects are increasingly populating the tree of life and characterizing biodiversity(1-4). Sparse taxon sampling has previously been proposed to confound phylogenetic inference(5), and captures only a fraction of the genomic diversity. Here we report a substantial step towards the dense representation of avian phylogenetic and molecular diversity, by analysing 363 genomes from 92.4% of bird families-including 267 newly sequenced genomes produced for phase II of the Bird 10,000 Genomes (B10K) Project. We use this comparative genome dataset in combination with a pipeline that leverages a reference-free whole-genome alignment to identify orthologous regions in greater numbers than has previously been possible and to recognize genomic novelties in particular bird lineages. The densely sampled alignment provides a single-base-pair map of selection, has more than doubled the fraction of bases that are confidently predicted to be under conservation and reveals extensive patterns of weak selection in predominantly non-coding DNA. Our results demonstrate that increasing the diversity of genomes used in comparative studies can reveal more shared and lineage-specific variation, and improve the investigation of genomic characteristics. We anticipate that this genomic resource will offer new perspectives on evolutionary processes in cross-species comparative analyses and assist in efforts to conserve species. A dataset of the genomes of 363 species from the Bird 10,000 Genomes Project shows increased power to detect shared and lineage-specific variation, demonstrating the importance of phylogenetically diverse taxon sampling in whole-genome sequencing.
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| 7. |
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| 8. |
- Hansson, Bengt, et al.
(author)
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Contrasting results from GWAS and QTL mapping on wing length in great reed warblers
- 2018
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In: Molecular Ecology Resources. - : Wiley. - 1755-098X .- 1755-0998. ; 18:4, s. 867-876
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Journal article (peer-reviewed)abstract
- A major goal in evolutionary biology is to understand the genetic basis of adaptive traits. In migratory birds, wing morphology is such a trait. Our previous work on the great reed warbler (Acrocephalus arundinaceus) shows that wing length is highly heritable and under sexually antagonistic selection. Moreover, a quantitative trait locus (QTL) mapping analysis detected a pronounced QTL for wing length on chromosome 2, suggesting that wing morphology is partly controlled by genes with large effects. Here, we re-evaluate the genetic basis of wing length in great reed warblers using a genomewide association study (GWAS) approach based on restriction site-associated DNA sequencing (RADseq) data. We use GWAS models that account for relatedness between individuals and include covariates (sex, age and tarsus length). The resulting association landscape was flat with no peaks on chromosome 2 or elsewhere, which is in line with expectations for polygenic traits. Analysis of the distribution of p-values did not reveal biases, and the inflation factor was low. Effect sizes were however not uniformly distributed on some chromosomes, and the Z chromosome had weaker associations than autosomes. The level of linkage disequilibrium (LD) in the population decayed to background levels within c. 1 kbp. There could be several reasons to why our QTL study and GWAS gave contrasting results including differences in how associations are modelled (cosegregation in pedigree vs. LD associations), how covariates are accounted for in the models, type of marker used (multi- vs. biallelic), difference in power or a combination of these. Our study highlights that the genetic architecture even of highly heritable traits is difficult to characterize in wild populations.
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| 9. |
- Hellgren, Olof, et al.
(author)
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Circannual variation in blood parasitism in a sub-Saharan migrant passerine bird, the garden warbler
- 2013
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In: Journal of Evolutionary Biology. - : Wiley. - 1010-061X .- 1420-9101. ; 26:5, s. 1047-1059
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Journal article (peer-reviewed)abstract
- Knowing the natural dynamics of pathogens in migratory birds is important, for example, to understand the factors that influence the transport of pathogens to and their transmission in new geographical areas, whereas the transmission of other pathogens might be restricted to a specific area. We studied haemosporidian blood parasites of the genera Plasmodium, Haemoproteus and Leucocytozoon in a migratory bird, the garden warbler Sylvia borin. Birds were sampled in spring, summer and early autumn at breeding grounds in Sweden, on migration at Capri, Italy and on arrival and departure from wintering staging areas in West Africa: mapping recoveries of garden warblers ringed in Fennoscandia and Capri showed that these sites are most probably on the migratory flyway of garden warblers breeding at Kvismaren. Overall, haemosporidian prevalence was 39%, involving 24 different parasite lineages. Prevalence varied significantly over the migratory cycle, with relatively high prevalence of blood parasites in the population on breeding grounds and at the onset of autumn migration, followed by marked declines in prevalence during migration both on spring and autumn passage. Importantly, we found that when examining circannual variation in the different lineages, significantly different prevalence profiles emerged both between and within genera. Our results suggest that differences in prevalence profiles are the result of either different parasite transmission strategies or coevolution between the host and the various parasite lineages. When separating parasites into common vs. rare lineages, we found that two peaks in the prevalence of rare parasites occur; on arrival at Swedish breeding grounds, and after the wintering period in Africa. Our results stress the importance of appropriate taxonomic resolution when examining host-parasite interactions, as variation in prevalence both between and within parasite genera can show markedly different patterns.
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| 10. |
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| 11. |
- Helseth, Anders, et al.
(author)
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Migration patterns, population trends and morphometrics of the Ruddy Turnstone Arenaria interpres passing Ottenby in south-eastern Sweden
- 2005
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In: Ornis Svecica. - 1102-6812. ; 15:2, s. 63-72
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Journal article (peer-reviewed)abstract
- We analysed 57 years’ uninterrupted trapping data of autumn migrating Ruddy Turnstones Arenaria interpres at Ottenby, south-eastern Sweden (1593 full-grown birds in 1947–2003; of them 574 birds with standardised trapping in 1976–2003). Numbers trapped decreased significantly for both adult and juvenile birds in the total dataset (–0.34 and –0.57 ringed birds per year), and for juveniles in the 1976–2003 dataset (–0.51 per year). Median date for adults was 27 July and for juveniles 6 August. Adult females passed on average three days earlier than adult males (females 27 July, males 30 July). The mean body masses (juveniles 108.0 g, adults 108.4 g) correspond to a fuel load of 21–22% in relation to lean body mass (89 g). Length of stay of retrapped birds was only 3.6 days. Thus, they continued the migration with small to moderate fat loads, comparable to reported fat loads elsewhere. Forty-four recoveries illustrate a narrow migration route along the western coasts of Europe, south to the wintering areas in tropical West Africa.
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| 12. |
- Helseth, Anders, et al.
(author)
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Southward migration and fuel deposition of Red Knots Calidris canutus
- 2005
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In: Ardea. - 0373-2266. ; 93:2, s. 213-224
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Journal article (other academic/artistic)abstract
- We compared the differences between spring and autumn in migration speed, fuelling rates and fuel loads of migrating Red Knots Calidris canutus. As a basis we used ringing data from Ottenby Bird Observatory, southeastern Sweden, collected 1948–2003, with morphometrical data from 1990–2003. Numbers ringed varied between 0 and 301 per year (average 56). Morphometrics, recoveries and recaptures of ringed birds indicated that most birds belonged to the Afro-Siberian subspecies C. c. canutus, possibly mixed with some Nearctic Red Knots C. c. islandica. Median trapping dates were 5 August (adults) and 31 August (juveniles). Mean body masses were low and almost equal for adults (111.8 g) and juveniles (111.4 g). The mean estimated fuel loads were 13–14% of lean body mass (LBM). In juveniles fuel loads increased with date. Among the few birds stopping over for longer than one day (2% of adults, 14% of juveniles), adult birds stayed on average 2.5 days and juveniles 3.4 days, with an overall average fuel deposition rate of 2.8% of LBM d–1. The autumn migration speed was estimated from ringing recoveries at 86 km d–1, which equals the speed of spring migration calculated from published information. The observed fuelling rate was as high as that of Red Knots at major spring stopover sites. We conclude that migration in autumn is as fast as in spring, although the generally small fuel loads indicate that migration is carried out in much smaller steps.
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| 13. |
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| 14. |
- Jonzén, Niclas, et al.
(author)
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Rapid advance of spring arrival dates in long-distance migratory birds
- 2006
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In: Science. - : American Association for the Advancement of Science (AAAS). - 1095-9203 .- 0036-8075. ; 312:5782, s. 1959-1961
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Journal article (peer-reviewed)abstract
- Several bird species have advanced the timing of their spring migration in response to recent climate change. European short-distance migrants, wintering in temperate areas, have been assumed to be more affected by change in the European climate than long-distance migrants wintering in the tropics. However, we show that tong-distance migrants have advanced their spring arrival in Scandinavia more than short-distance migrants. By analyzing a long-term data set from southern Italy, we show that long-distance migrants also pass through the Mediterranean region earlier. We argue that this may reflect a climate-driven evolutionary change in the timing of spring migration.
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| 15. |
- Jonzén, Niclas, et al.
(author)
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Response to comment on "Rapid advance of spring arrival dates in long-distance migratory birds"
- 2007
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In: Science. - : American Association for the Advancement of Science (AAAS). - 1095-9203 .- 0036-8075. ; 315:5812, s. 598-598
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Journal article (other academic/artistic)abstract
- Both's comment questions our suggestion that the advanced spring arrival time of long-distance migratory birds in Scandinavia and the Mediterranean may reflect a climate-driven evolutionary change. We present additional arguments to support our hypothesis but underscore the importance of additional studies involving direct tests of evolutionary change.
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| 16. |
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| 17. |
- Jonzén, Niclas, et al.
(author)
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The timing of spring migration in trans-Saharan migrants: a comparison between Ottenby, Sweden and Capri, Italy
- 2006
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In: Ornis Svecica. - 1102-6812. ; 16:1-2, s. 27-33
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Journal article (peer-reviewed)abstract
- Some migratory birds have advanced their spring arrival to Northern Europe, possibly by increasing the speed of migration through Europe in response to increased temperature en route. In this paper we compare the phenology of spring arrival of seven trans-Saharan migrants along their migration route and test for patterns indicating that migration speed varied over the season using long-term data collected on the Italian island of Capri and at Ottenby Bird Observatory, Sweden. There was a linear relationship between median arrival dates on Capri and at Ottenby. The slope was not significantly different from one. On average, the seven species arrived 15 days later at Ottenby compared to Capri. There was a (non-significant) negative relationship between the species-specific arrival dates at Capri and the differences in median arrival dates between Capri and Ottenby, possibly indicating a tendency towards faster migration through Europe later in the season. To what extent different species are able to speed up their migration to benefit from the advancement of spring events is unknown.
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| 18. |
- Lehikoinen, Aleksi, et al.
(author)
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Phenology of the avian spring migratory passage in Europe and North America : Asymmetric advancement in time and increase in duration
- 2019
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In: Ecological Indicators. - : Elsevier BV. - 1470-160X .- 1872-7034. ; 101, s. 985-991
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Journal article (peer-reviewed)abstract
- Climate change has been shown to shift the seasonal timing (i.e. phenology) and distribution of species. The phenological effects of climate change on living organisms have often been tested using first occurrence dates, which may be uninformative and biased. More rarely investigated is how different phases of a phenological sequence (e.g. beginning, central tendency and end) or its duration have changed over time. This type of analysis requires continuous observation throughout the phenological event over multiple years, and such data sets are rare. In this study we examined the impact of temperature on long-term change of passage timing and duration of the spring migration period in birds, and which species' traits explain species-specific variation. Data used covered 195 species from 21 European and Canadian bird observatories from which systematic daily sampling protocols were available. Migration dates were negatively associated with early spring temperature and timings had in general advanced in 57 years. Short-distance migrants advanced the beginning of their migration more than long-distance migrants when corrected for phylogenic relatedness, but such a difference was not found in other phases of migration. The advancement of migration has generally been greater for the beginning and median phases of migration relative to the end, leading to extended spring migration seasons. Duration of the migration season increased with increasing temperature. Phenological changes have also been less noticeable in Canada even when corrected for rate of change in temperature. To visualize long-term changes in phenology, we constructed the first multi-species spring migration phenology indicator to describe general changes in median migration dates in the northern hemisphere. The indicator showed an average advancement of one week during five decades across the continents (period 1959-2015). The indicator is easy to update with new data and we therefore encourage future research to investigate whether the trend towards longer periods of occurrence or emergence in spring is also evident in other migratory populations. Such phenological changes may influence detectability in monitoring schemes, and may have broader implications on population and community dynamics.
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| 19. |
- Mellinger, Samantha, et al.
(author)
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Improved haplotype resolution of highly duplicated MHC genes in a long-read genome assembly using MiSeq amplicons
- 2023
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In: PeerJ. - : PeerJ Inc. - 2167-8359. ; 11
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Journal article (peer-reviewed)abstract
- Long-read sequencing offers a great improvement in the assembly of complex genomic regions, such as the major histocompatibility complex (MHC) region, which can contain both tandemly duplicated MHC genes (paralogs) and high repeat content. The MHC genes have expanded in passerine birds, resulting in numerous MHC paralogs, with relatively high sequence similarity, making the assembly of the MHC region challenging even with long-read sequencing. In addition, MHC genes show rather high sequence divergence between alleles, making diploid-aware assemblers incorrectly classify haplotypes from the same locus as sequences originating from different genomic regions. Consequently, the number of MHC paralogs can easily be over-or underestimated in long-read assemblies. We therefore set out to verify the MHC diversity in an original and a haplotype-purged long-read assembly of one great reed warbler Acrocephalus arundinaceus individual (the focal individual) by using Illumina MiSeq amplicon sequencing. Single exons, representing MHC class I (MHC-I) and class IIB (MHC-IIB) alleles, were sequenced in the focal individual and mapped to the annotated MHC alleles in the original long-read genome assembly. Eighty-four percent of the annotated MHC-I alleles in the original long-read genome assembly were detected using 55% of the amplicon alleles and likewise, 78% of the annotated MHC-IIB alleles were detected using 61% of the amplicon alleles, indicating an incomplete annotation of MHC genes. In the haploid genome assembly, each MHC-IIB gene should be represented by one allele. The parental origin of the MHC-IIB amplicon alleles in the focal individual was determined by sequencing MHC-IIB in its parents. Two of five larger scaffolds, containing 6-19 MHC-IIB paralogs, had a maternal and paternal origin, respectively, as well as a high nucleotide similarity, which suggests that these scaffolds had been incorrectly assigned as belonging to different loci in the genome rather than as alternate haplotypes of the same locus. Therefore, the number of MHC-IIB paralogs was overestimated in the haploid genome assembly. Based on our findings we propose amplicon sequencing as a suitable complement to long-read sequencing for independent validation of the number of paralogs in general and for haplotype inference in multigene families in particular.
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| 20. |
- Melo, Martim, et al.
(author)
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The endangered São Tomé Grosbeak Neospiza concolor is the world's largest canary
- 2017
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In: Ibis. - : John Wiley & Sons. - 0019-1019 .- 1474-919X. ; 159:3, s. 673-679
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Journal article (peer-reviewed)abstract
- The Sao Tome Grosbeak Neospiza concolor, endemic to the island of Sao Tome (Gulf of Guinea), is one of the least known birds in the world. Formerly considered to be an aberrant weaver (Ploceidae), it is currently placed in a monotypic genus within the true finches (Fringillidae). Phylogenetic inference based on mitochondrial and nuclear sequences confidently identifies N. concolor as an Old World finch (Fringillidae: Carduelinae) within the Crithagra seedeater/canary clade. The Sao Tome Grosbeak is therefore the world's largest canary, 50% heavier than the next largest species, and it co-occurs with a population of its sister species, the Principe Seedeater Crithagra rufobrunnea.
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| 21. |
- Pala, Irene, et al.
(author)
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Evidence of a neo-sex chromosome in birds.
- 2012
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In: Heredity. - : Springer Science and Business Media LLC. - 1365-2540 .- 0018-067X. ; 108, s. 264-272
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Journal article (peer-reviewed)abstract
- Neo-sex chromosomes often originate from sex chromosome-autosome fusions and constitute an important basis for the study of gene degeneration and expression in a sex chromosomal context. Neo-sex chromosomes are known from many animal and plant lineages, but have not been reported in birds, a group in which genome organization seems particularly stable. Following indications of sex linkage and unexpected sex-biased gene expression in warblers (Sylvioidea; Passeriformes), we have conducted an extensive marker analysis targeting 31 orthologues of loci on zebra finch chromosome 4a in five species, representative of independent branches of Passerida. We identified a region of sex linkage covering approximately the first half (10 Mb) of chromosome 4a, and associated to both Z and W chromosomes, in three Sylvioidea passerine species. Linkage analysis in an extended pedigree of one species additionally confirmed the association between this part of chromosome 4a and the Z chromosome. Markers located between 10 and 21 Mb of chromosome 4a showed no signs of sex linkage, suggesting that only half of the chromosome was involved in this transition. No sex linkage was observed in non-Sylvioidea passerines, indicating that the neo-sex chromosome arose at the base of the Sylvioidea branch of the avian phylogeny, at 47.4-37.6 millions years ago (MYA), substantially later than the ancestral sex chromosomes (150 MYA). We hypothesize that the gene content of chromosome 4a might be relevant in its transition to a sex chromosome, based on the presence of genes (for example, the androgen receptor) that could offer a selective advantage when associated to Z-linked sex determination loci.Heredity advance online publication, 7 September 2011; doi:10.1038/hdy.2011.70.
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| 22. |
- Roved, Jacob, et al.
(author)
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MHCtools - an R package for MHC high-throughput sequencing data : Genotyping, haplotype and supertype inference, and downstream genetic analyses in non-model organisms
- 2022
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In: Molecular Ecology Resources. - : John Wiley & Sons. - 1755-098X .- 1755-0998. ; 22:7, s. 2775-2792
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Journal article (peer-reviewed)abstract
- The major histocompatibility complex (MHC) plays a central role in the vertebrate adaptive immune system and has been of long-term interest in evolutionary biology. While several protocols have been developed for MHC genotyping, there is a lack of transparent and standardized tools for downstream analysis of MHC data. Here, we present the r package mhctools and demonstrate the use of its functions to (i) assist accurate MHC genotyping from high-throughput amplicon-sequencing data, (ii) infer functional MHC supertypes using bootstrapped clustering analysis, (iii) identify segregating MHC haplotypes from family data, and (iv) analyse functional and genetic distances between MHC sequences. We employed mhctools to analyse MHC class I (MHC-I) amplicon data of 559 great reed warblers (Acrocephalus arundinaceus). We identified 390 MHC-I alleles which clustered into 14 functional supertypes. A phylogenetic analysis and analyses of positive selection suggested that the MHC-I alleles belong to several distinct functional groups. We furthermore identified 107 segregating haplotypes among 116 families, and found substantial variation in diversity with 4-21 MHC-I alleles and 3-13 MHC-I supertypes per haplotype. Finally, we show that the great reed warbler haplotypes harboured combinations of MHC-I supertypes with greater functional divergence than observed in simulated populations of possible haplotypes, a result that is in accordance with the divergent allele advantage hypothesis. Our study demonstrates the power of mhctools to support genotyping and analysis of MHC in non-model species, which we hope will encourage broad implementation among researchers in MHC genetics and evolution.
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| 23. |
- Sjögren, Jonathan, et al.
(author)
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EndoS2 is a unique and conserved enzyme of serotype M49 group A Streptococcus that hydrolyses N-linked glycans on IgG and α1-acid glycoprotein
- 2013
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In: Biochemical Journal. - 0264-6021. ; 455:1, s. 107-118
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Journal article (peer-reviewed)abstract
- Many bacteria have evolved ways to interact with glycosylation functions of the immune system of their hosts. Streptococcus pyogenes [GAS (group A Streptococcus)] secretes the enzyme EndoS that cleaves glycans on human IgG and impairs the effector functions of the antibody. The ndoS gene, encoding EndoS, has, until now, been thought to be conserved throughout the serotypes. However, in the present study, we identify EndoS2, an endoglycosidase in serotype M49 GAS strains. We characterized EndoS2 and the corresponding ndoS2 gene using sequencing, bioinformatics, phylogenetic analysis, recombinant expression and LC–MS analysis of glycosidic activity. This revealed that EndoS2 is present exclusively, and highly conserved, in serotype M49 of GAS and is only 37% identical with EndoS. EndoS2 showed endo-β-N-acetylglucosaminidase activity on all N-linked glycans of IgG and on biantennary and sialylated glycans of AGP (α1-acid glycoprotein). The enzyme was found to act only on native IgG and AGP and to be specific for free biantennary glycans with or without terminal sialylation. GAS M49 expression of EndoS2 was monitored in relation to carbohydrates present in the culture medium and was linked to the presence of sucrose. We conclude that EndoS2 is a unique endoglycosidase in serotype M49 and differs from EndoS of other GAS strains by targeting both IgG and AGP. EndoS2 expands the repertoire of GAS effectors that modify key glycosylated molecules of host defence.
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| 24. |
- Stervander, Martin, et al.
(author)
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An updated chronology of passerine birds
- 2020
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In: <em>The Largest Avian Radiation</em>. - Barcelona : Lynx Edicions. ; , s. 387-396
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Book chapter (other academic/artistic)
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| 25. |
- Stervander, Martin, et al.
(author)
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Disentangling the complex evolutionary history of the Western Palearctic blue tits (Cyanistes spp.) - phylogenomic analyses suggest radiation by multiple colonisation events and subsequent isolation.
- 2015
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In: Molecular Ecology. - : Wiley. - 0962-1083. ; 24:10, s. 2477-2494
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Journal article (peer-reviewed)abstract
- Isolated islands and their often unique biota continue to play key roles for understanding the importance of drift, genetic variation, and adaptation in the process of population differentiation and speciation. One island system that has inspired and intrigued evolutionary biologists is the blue tit complex (Cyanistes spp.) in Europe and Africa, in particular the complex evolutionary history of the multiple genetically distinct taxa of the Canary Islands. Understanding Afrocanarian colonisation events is of particular importance because of recent unconventional suggestions that these island populations acted as source of the widespread population in mainland Africa. We investigated the relationship between mainland and island blue tits using a combination of Sanger sequencing at a population level (20 loci; 12,500 nucleotides) and next generation sequencing of single population representatives (>3,200,000 nucleotides), analysed in coalescence and phylogenetic frameworks. We found (i) that Afrocanarian blue tits are monophyletic and represent four major clades, (ii) that the blue tit complex has a continental origin, and that the Canary Islands were colonised three times, (iii) that all island populations have low genetic variation, indicating low long-term effective population sizes, and (iv) that populations on La Palma and in Libya represent relicts of an ancestral North African population. Further, demographic reconstructions revealed (v) that the Canary Islands, conforming to traditional views, hold sink populations, which have not served as source for back colonisation of the African mainland. Our study demonstrates the importance of complete taxon sampling and an extensive multi-marker study design to obtain robust phylogeographical inferences. This article is protected by copyright. All rights reserved.
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