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  • Sabantsev, Anton, et al. (author)
  • Spatiotemporally controlled generation of NTPs for single-molecule studies
  • 2022
  • In: Nature Chemical Biology. - : Springer Nature. - 1552-4450 .- 1552-4469. ; 18:10, s. 1144-
  • Journal article (peer-reviewed)abstract
    • Many essential processes in the cell depend on proteins that use nucleoside triphosphates (NTPs). Methods that directly monitor the often-complex dynamics of these proteins at the single-molecule level have helped to uncover their mechanisms of action. However, the measurement throughput is typically limited for NTP-utilizing reactions, and the quantitative dissection of complex dynamics over multiple sequential turnovers remains challenging. Here we present a method for controlling NTP-driven reactions in single-molecule experiments via the local generation of NTPs (LAGOON) that markedly increases the measurement throughput and enables single-turnover observations. We demonstrate the effectiveness of LAGOON in single-molecule fluorescence and force spectroscopy assays by monitoring DNA unwinding, nucleosome sliding and RNA polymerase elongation. LAGOON can be readily integrated with many single-molecule techniques, and we anticipate that it will facilitate studies of a wide range of crucial NTP-driven processes.
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Type of publication
journal article (1)
Type of content
peer-reviewed (1)
Author/Editor
Deindl, Sebastian (1)
Mao, Guanzhong, 1985 ... (1)
Panfilov, Mikhail (1)
Sabantsev, Anton (1)
Ho, Oanh (1)
Aguirre, Javier Rive ... (1)
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Arseniev, Anatolii (1)
Khodorkovskiy, Mikha ... (1)
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University
Uppsala University (1)
Language
English (1)
Research subject (UKÄ/SCB)
Natural sciences (1)
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