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Search: WFRF:(Bark N)

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  • Bark, C, et al. (author)
  • SNAP-25 and gene-targeted mouse mutants
  • 2009
  • In: Annals of the New York Academy of Sciences. - : Wiley. - 1749-6632 .- 0077-8923. ; 1152, s. 145-153
  • Journal article (peer-reviewed)
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  • Cederwall, Bo, et al. (author)
  • Collective rotational-vibrational transition in the very neutron-deficient nuclei (171,172)-Pt
  • 1998
  • In: Physics Letters B. - AMSTERDAM, NETHERLANDS : ELSEVIER SCIENCE. - 0370-2693 .- 1873-2445. ; 443:1-4, s. 69-76
  • Journal article (peer-reviewed)abstract
    • Excited states have been identified for the first time in very neutron deficient Pt-171.172 nuclei using the recoil-or-decay tagging technique. The ground-state band in Pt-172 has been established up to I-pi = 8+. A similar level sequence, presumably built on the I-pi = 13/2(+) state, is observed for Pt-171. The data are compared with theoretical calculations based on the mean field approach and the random phase approximation and are put into the context of the systematics of platinum isotopes. (C) 1998 Elsevier Science B.V. All rights reserved.
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  • Hosia, W., et al. (author)
  • Folding into a ß-Hairpin Can Prevent Amyloid Fibril-Formation
  • 2004
  • In: Biochemistry. - : American Chemical Society (ACS). - 0006-2960 .- 1520-4995. ; 43:16, s. 4655-4661
  • Journal article (peer-reviewed)abstract
    • The tetrapeptide KFFE is one of the shortest amyloid fibril-forming peptides described. Herein, we have investigated how the structural environment of this motif affects polymerization. Using a turn motif (YNGK) or a less rigid sequence (AAAK) to fuse two KFFE tetrapeptides, we show by several biophysical methods that the amyloidogenic properties are strongly dependent on the structural environment. The dodecapeptide KFFEAAAKKFFE forms abundant thick fibril bundles. Freshly dissolved KFFEAAAKKFFE is monomeric and shows mainly disordered secondary structure, as evidenced by circular dichroism, NMR spectroscopy, hydrogen/deuterium exchange measurements, and molecular modeling studies. In sharp contrast, the dodecapeptide KFFEYNGKKFFE does not form fibrils but folds into a stable ß-hairpin. This structure can oligomerize into a stable 12-mer and multiples thereof, as shown by size exclusion chromatography, sedimentation analysis, and electrospray mass spectrometry. These data indicate that the structural context in which a potential fibril forming sequence is present can prevent fibril formation by favoring self-limiting oligomerization over polymerization.
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  • Lilja, L, et al. (author)
  • Cyclin-dependent kinase 5 promotes insulin exocytosis
  • 2001
  • In: Journal of Biological Chemistry. - 0021-9258 .- 1083-351X. ; 276:36, s. 34199-34205
  • Journal article (peer-reviewed)abstract
    • Cyclin-dependent kinase 5 (Cdk5) is widely expressed although kinase activity has been described preferentially in neuronal systems. Cdk5 has an impact on actin polymerization during neuronal migration and neurite outgrowth and deregulation of the kinase has been implicated in the promotion of neurodegeneration. Recently it was shown that Cdk5 modulates dopamine signaling in neurons by regulating DARPP-32 function. In addition, Cdk5 phosphorylates munc-18 and synapsin I, two essential components of the exocytotic machinery. We have shown by reverse transcriptase-polymerase chain reaction, immunocytochemistry, and Western blotting that Cdk5 is present in the insulin-secreting pancreatic beta-cell. Subcellular fractionation of isolated beta-cells revealed a glucose-induced translocation of membrane-bound Cdk5 protein to lower density fractions. Inhibition of Cdk5 with roscovitine reduced insulin secretion with approximately 35% compared with control after glucose stimulation and with approximately 65% after depolarization with glucose and KCl. Capacitance measurements performed on single beta-cells that expressed a dominant-negative Cdk5 mutant showed impaired exocytosis. The effect on exocytosis by Cdk5 appeared to be independent of changes in free cytoplasmic Ca(2+) concentration. Taken together these results show that Cdk5 is present in beta-cells and acts as a positive regulator of insulin exocytosis.
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  • Nina, Lidia, et al. (author)
  • Anoxic oceanic conditions during the late Permian mass extinction-evidence from the Chutani formation, Bolivia
  • 2020
  • In: Journal of South American Earth Sciences. - : Elsevier. - 0895-9811 .- 1873-0647. ; 103
  • Journal article (peer-reviewed)abstract
    • We analyze diagenesis of carbonate rocks from the Late Permian Chutani Formation of western Bolivia (San Pablo de Tiquina section) in the southern Lake Titicaca zone, which is a sedimentary succession of semiarid tidal flat comprised of mixed carbonate and siliciclastic units. The diagenetic study includes petrographic analysis (conventional petrography and cathodoluminescence) and geochemical analysis (carbon and oxygen isotopes and minor element chemistry). An integrated study of lithofacies and isotope stratigraphy of carbonates shows a succession of five types of depositional environments: tidal barrier, tidal flat, shoal coastal and shoreface. The Chutani Formation was subjected to different diagenetic processes including micritization, cementation, mechanical compaction, dissolution, neomorphism, dolomitization and dedolomitization that occurred during marine to shallow burial stages. Carbon isotope (δ13C) values range between −7 and 2.9‰ (VPDB) with variations linked to stratigraphic changes. The transgressive stage of the basin exhibits an upwards decreasing trend of δ13C values whereas regression is marked by an increase in such values. The oxygen isotope values (δ18O) vary from −16.6 to −1‰ VPDB with lighter values towards the top of the stratigraphy. The transgressive trend may reflect mixing of meteoric water and/or volcanic-hydrothermal fluids with seawater or progressive oxygenation with enhanced circulation conditions. Heavier values during regression may reflect more evaporitic and anoxic conditions towards the Permian-Triassic boundary. Significant variation in isotope values among neighbouring samples is observed, especially during trangression, which may be the result of different diagenetic processes.
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  • Nina, Lidia, et al. (author)
  • Diagenesis of the Pennsylvanian –Lower Permian Copacabana Formation, western Bolivian Altiplano
  • 2020
  • In: Journal of South American Earth Sciences. - : Elsevier. - 0895-9811 .- 1873-0647. ; 100
  • Journal article (peer-reviewed)abstract
    • This contribution presents the diagenetic evolution of limestone deposits in the Copacabana Formation that occurs in the northern Altiplano, in the Lake Titicaca area of western Bolivia. The best-exposed stratigraphic succession of the Copacabana Formation occurs in the Yampupata section, and its division into five facies successions is based on petrographic analysis, cathodoluminescence, x-ray fluorescence analysis (chemical composition) and stable isotope data (δ18O and δ13C). The results showed that the carbonate rocks experienced early marine diagenetic processes such as micritization during or after the deposition (eogenesis). The initial burial event (mesogenesis 1), characterized by stabilization of temperature-water carbonates by freshwater, and represented by bladed calcite-cement, equant calcite cement, dissolution, dolomitization, neomorphism, silicification and compaction (physical), occurred in shallow burial conditions. During the second burial episode (mesogenesis 2), in deeper burial environment the processes include: compaction (physical and chemical) and neomorphism. Diagenetic processes have affected reservoir quality in the Copacabana Formation during the mesodiagenesis, and reduced the conditions for development of high-quality conventional hydrocarbon reservoirs. Depleted O and C stable isotope signatures indicate that these carbonate rocks deposits underwent both meteoric and burial diagenesis including moderate water-rock interaction.
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  • Sohler, D., et al. (author)
  • Yrast states of the proton drip line nucleus 106 Sb
  • 1999
  • In: Physical Review C - Nuclear Physics. - 2469-9985 .- 2469-9993 .- 0556-2813 .- 1089-490X. ; 59:3, s. 1324-1327
  • Journal article (peer-reviewed)abstract
    • Yrast states of [Formula Presented] have been investigated in the [Formula Presented] reaction using in-beam [Formula Presented]-spectroscopic methods and in the [Formula Presented] reaction performing delayed [Formula Presented] and conversion electron studies. A new isomeric state was found at 103 keV with [Formula Presented] The number of states and transitions in the proposed level scheme have been doubled. The experimental results are discussed within the framework of the shell model. © 1999 The American Physical Society.
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