| 1. |
- Beecham, Ashley H, et al.
(author)
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Analysis of immune-related loci identifies 48 new susceptibility variants for multiple sclerosis.
- 2013
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In: Nature genetics. - : Springer Science and Business Media LLC. - 1546-1718 .- 1061-4036. ; 45:11, s. 1353-60
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Journal article (peer-reviewed)abstract
- Using the ImmunoChip custom genotyping array, we analyzed 14,498 subjects with multiple sclerosis and 24,091 healthy controls for 161,311 autosomal variants and identified 135 potentially associated regions (P < 1.0 × 10(-4)). In a replication phase, we combined these data with previous genome-wide association study (GWAS) data from an independent 14,802 subjects with multiple sclerosis and 26,703 healthy controls. In these 80,094 individuals of European ancestry, we identified 48 new susceptibility variants (P < 5.0 × 10(-8)), 3 of which we found after conditioning on previously identified variants. Thus, there are now 110 established multiple sclerosis risk variants at 103 discrete loci outside of the major histocompatibility complex. With high-resolution Bayesian fine mapping, we identified five regions where one variant accounted for more than 50% of the posterior probability of association. This study enhances the catalog of multiple sclerosis risk variants and illustrates the value of fine mapping in the resolution of GWAS signals.
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| 2. |
- Girardin, Bertrand, et al.
(author)
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Characterization of thermo-physical properties of EVA/ATH : Application to gasification experiments and pyrolysis modeling
- 2015
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In: Materials. - : MDPI AG. - 1996-1944. ; 8:11, s. 7837-7863
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Journal article (peer-reviewed)abstract
- The pyrolysis of solid polymeric materials is a complex process that involves both chemical and physical phenomena such as phase transitions, chemical reactions, heat transfer, and mass transport of gaseous components. For modeling purposes, it is important to characterize and to quantify the properties driving those phenomena, especially in the case of flame-retarded materials. In this study, protocols have been developed to characterize the thermal conductivity and the heat capacity of an ethylene-vinyl acetate copolymer (EVA) flame retarded with aluminum tri-hydroxide (ATH). These properties were measured for the various species identified across the decomposition of the material. Namely, the thermal conductivity was found to decrease as a function of temperature before decomposition whereas the ceramic residue obtained after the decomposition at the steady state exhibits a thermal conductivity as low as 0.2 W/m/K. The heat capacity of the material was also investigated using both isothermal modulated Differential Scanning Calorimetry (DSC) and the standard method (ASTM E1269). It was shown that the final residue exhibits a similar behavior to alumina, which is consistent with the decomposition pathway of EVA/ATH. Besides, the two experimental approaches give similar results over the whole range of temperatures. Moreover, the optical properties before decomposition and the heat capacity of the decomposition gases were also analyzed. Those properties were then used as input data for a pyrolysis model in order to predict gasification experiments. Mass losses of gasification experiments were well predicted, thus validating the characterization of the thermo-physical properties of the material. © 2015 by the authors; licensee MDPI, Basel, Switzerland.
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| 3. |
- Girardin, Bertrand, et al.
(author)
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Measurement of kinetics and thermodynamics of the thermal degradation for flame retarded materials : Application to EVA/ATH/NC
- 2017
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In: Journal of Analytical and Applied Pyrolysis. - : Elsevier BV. - 0165-2370 .- 1873-250X. ; 124, s. 130-148
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Journal article (peer-reviewed)abstract
- The modelling of the behavior of a material exposed to fire is very complex and needs the coupling of fluid dynamics, combustion, heat and mass transfer, kinetics and so forth. A growing amount of studies and numerical models are reported in this field since the last decade. The aim of these models is to predict the fire behavior of wood, charring or non-charring polymers and even intumescent materials. However, these studies are seldom applied to formulated materials and especially flame retarded materials. In this study, an ethylene-vinyl acetate copolymer was formulated with a flame retardant (aluminum tri-hydroxide) and a synergist (nanoclays). A systematic approach for the characterization of the thermo-physical properties of the material as well as of its optical properties and the heat capacity of the decomposition gases is proposed and applied in this study. It is shown that it is possible to evaluate the input data required for pyrolysis modelling, even for multi decomposition steps materials. It is also shown that the diffusion of the gases inside the material had to be considered on the opposite of the classical assumption found in other studies. Indeed, using low mass diffusivity was the sole way to predict in the same time the temperature distribution and the mass loss rate of the material in a gasification experiments.
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| 4. |
- Gómez-Fernández, Paloma, et al.
(author)
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The Rare IL22RA2 Signal Peptide Coding Variant rs28385692 Decreases Secretion of IL-22BP Isoform-1, -2 and -3 and Is Associated with Risk for Multiple Sclerosis
- 2020
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In: Cells. - : MDPI AG. - 2073-4409. ; 9:1
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Journal article (peer-reviewed)abstract
- The IL22RA2 locus is associated with risk for multiple sclerosis (MS) but causative variants are yet to be determined. In a single nucleotide polymorphism (SNP) screen of this locus in a Basque population, rs28385692, a rare coding variant substituting Leu for Pro at position 16 emerged significantly (p = 0.02). This variant is located in the signal peptide (SP) shared by the three secreted protein isoforms produced by IL22RA2 (IL-22 binding protein-1(IL-22BPi1), IL-22BPi2 and IL-22BPi3). Genotyping was extended to a Europe-wide case-control dataset and yielded high significance in the full dataset (p = 3.17 × 10-4). Importantly, logistic regression analyses conditioning on the main known MS-associated SNP at this locus, rs17066096, revealed that this association was independent from the primary association signal in the full case-control dataset. In silico analysis predicted both disruption of the alpha helix of the H-region of the SP and decreased hydrophobicity of this region, ultimately affecting the SP cleavage site. We tested the effect of the p.Leu16Pro variant on the secretion of IL-22BPi1, IL-22BPi2 and IL-22BPi3 and observed that the Pro16 risk allele significantly lowers secretion levels of each of the isoforms to around 50%-60% in comparison to the Leu16 reference allele. Thus, our study suggests that genetically coded decreased levels of IL-22BP isoforms are associated with augmented risk for MS.
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| 5. |
- Lill, Christina M., et al.
(author)
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Closing the case of APOE in multiple sclerosis : no association with disease risk in over 29 000 subjects
- 2012
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In: Journal of Medical Genetics. - : BMJ. - 0022-2593 .- 1468-6244. ; 49:9, s. 558-562
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Journal article (peer-reviewed)abstract
- Background Single nucleotide polymorphisms (SNPs) rs429358 (ε4) and rs7412 (ε2), both invoking changes in the amino-acid sequence of the apolipoprotein E (APOE) gene, have previously been tested for association with multiple sclerosis (MS) risk. However, none of these studies was sufficiently powered to detect modest effect sizes at acceptable type-I error rates. As both SNPs are only imperfectly captured on commonly used microarray genotyping platforms, their evaluation in the context of genome-wide association studies has been hindered until recently.Methods We genotyped 12 740 subjects hitherto not studied for their APOE status, imputed raw genotype data from 8739 subjects from five independent genome-wide association studies datasets using the most recent high-resolution reference panels, and extracted genotype data for 8265 subjects from previous candidate gene assessments.Results Despite sufficient power to detect associations at genome-wide significance thresholds across a range of ORs, our analyses did not support a role of rs429358 or rs7412 on MS susceptibility. This included meta-analyses of the combined data across 13 913 MS cases and 15 831 controls (OR=0.95, p=0.259, and OR 1.07, p=0.0569, for rs429358 and rs7412, respectively).Conclusion Given the large sample size of our analyses, it is unlikely that the two APOE missense SNPs studied here exert any relevant effects on MS susceptibility.
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| 6. |
- Sawcer, Stephen, et al.
(author)
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Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis
- 2011
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In: Nature. - : Springer Science and Business Media LLC. - 0028-0836 .- 1476-4687. ; 476:7359, s. 214-219
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Journal article (peer-reviewed)abstract
- Multiple sclerosis is a common disease of the central nervous system in which the interplay between inflammatory and neurodegenerative processes typically results in intermittent neurological disturbance followed by progressive accumulation of disability. Epidemiological studies have shown that genetic factors are primarily responsible for the substantially increased frequency of the disease seen in the relatives of affected individuals, and systematic attempts to identify linkage in multiplex families have confirmed that variation within the major histocompatibility complex (MHC) exerts the greatest individual effect on risk. Modestly powered genome-wide association studies (GWAS) have enabled more than 20 additional risk loci to be identified and have shown that multiple variants exerting modest individual effects have a key role in disease susceptibility. Most of the genetic architecture underlying susceptibility to the disease remains to be defined and is anticipated to require the analysis of sample sizes that are beyond the numbers currently available to individual research groups. In a collaborative GWAS involving 9,772 cases of European descent collected by 23 research groups working in 15 different countries, we have replicated almost all of the previously suggested associations and identified at least a further 29 novel susceptibility loci. Within the MHC we have refined the identity of the HLA-DRB1 risk alleles and confirmed that variation in the HLA-A gene underlies the independent protective effect attributable to the class I region. Immunologically relevant genes are significantly overrepresented among those mapping close to the identified loci and particularly implicate T-helper-cell differentiation in the pathogenesis of multiple sclerosis.
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| 7. |
- Witkowski, Artur, et al.
(author)
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Development of an Anaerobic Pyrolysis Model for Fire Retardant Cable Sheathing Materials
- 2015
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In: Polymer degradation and stability. - : Elsevier BV. - 0141-3910 .- 1873-2321. ; 113, s. 208-217
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Journal article (peer-reviewed)abstract
- Wire and cable coverings are potentially a major cause of fire in buildings and other installations. As they need to breach fire walls and are frequently located in vertical ducting, they have significant potential to increase the fire hazard. It is therefore important to understand the ignition and burning characteristics of cables by developing a model capable of predicting their burning behaviour for a range of scenarios. The fire performance of electrical cables is usually dominated by the fire performance of the sheathing materials. The complexity of the problem increases when cable sheathing incorporates fire retardants. One-dimensional pyrolysis models have been constructed for cable sheathing materials, based on milligram-scale and bench-scale test data by comparing the performance of three different software tools (ThermaKin, Comsol Multiphysics and FDS, version 6.0.1). Thermogravimetric analysis and differential scanning calorimetry were conducted on powdered cable coatings to determine the thermal degradation mechanism, the enthalpy of decomposition reactions, and the heat capacities of all apparent species. The emissivity and the in-depth absorption coefficient were determined using reflectance and transmittance measurements, with dispersive and non-dispersive spectrometers and integrating spheres. Bench-scale tests were conducted with a mass loss calorimeter flushed with nitrogen on samples in a horizontal orientation, for comparison with the pyrolysis model of non-flaming decomposition at an external heat flux of 50 kW m-2. The parameters determined through analysis of the milligram-scale data were used to construct a pyrolysis model that predicted the total mass loss from calorimeter tests in anaerobic conditions. A condensed phase pyrolysis model that accurately predicts in-depth temperature profiles of a solid fuel, and the mass flux of volatiles evolved during degradation of the fuel, is an essential component of a comprehensive fire model, which when coupled to a computational fluid dynamics code can be used to predict the burning processes in a fire scenario. Pyrolysis models vary considerably in complexity based on the assumptions incorporated into the development of the model.
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