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Träfflista för sökning "WFRF:(Takamatsu Susumu) "

Search: WFRF:(Takamatsu Susumu)

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1.
  • Desprez-Loustau, Marie-Laure, et al. (author)
  • From leaf to continent : The multi-scale distribution of an invasive cryptic pathogen complex on oak
  • 2018
  • In: Fungal ecology. - : Elsevier BV. - 1754-5048 .- 1878-0083. ; 36, s. 39-50
  • Journal article (peer-reviewed)abstract
    • The spatial distribution and niche differentiation of three closely related species (Erysiphe alphitoides, Erysiphe quercicola and Erysiphe hypophylla) causing oak powdery mildew was studied at scales ranging from the European continent, where they are invasive, to a single leaf. While E. alphitoides was dominant at all scales, E. quercicola and E. hypophylla had restricted geographic, stand and leaf distributions. The large-scale distributions were likely explained by climatic factors and species environmental tolerances, with E. quercicola being more frequent in warmer climates and E. hypophylla in colder climates. The extensive sampling and molecular analyses revealed the cryptic invasion of E. quercicola in nine countries from which it had not previously been recorded. The presence of the three species was also strongly affected by host factors, such as oak species and developmental stage. Segregation patterns between Erysiphe species were observed at the leaf scale, between and within leaf surfaces, suggesting competitive effects.
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2.
  • Nilsson, R. Henrik, 1976, et al. (author)
  • Improving ITS sequence data for identification of plant pathogenic fungi
  • 2014
  • In: Fungal Diversity. - : Springer Science and Business Media LLC. - 1560-2745 .- 1878-9129. ; 67:1, s. 11-19
  • Journal article (peer-reviewed)abstract
    • Plant pathogenic fungi are a large and diverse assemblage of eukaryotes with substantial impacts on natural ecosystems and human endeavours. These taxa often have complex and poorly understood life cycles, lack observable, discriminatory morphological characters, and may not be amenable to in vitro culturing. As a result, species identification is frequently difficult. Molecular (DNA sequence) data have emerged as crucial information for the taxonomic identification of plant pathogenic fungi, with the nuclear ribosomal internal transcribed spacer (ITS) region being the most popular marker. However, international nucleotide sequence databases are accumulating numerous sequences of compromised or low-resolution taxonomic annotations and substandard technical quality, making their use in the molecular identification of plant pathogenic fungi problematic. Here we report on a concerted effort to identify high-quality reference sequences for various plant pathogenic fungi and to re-annotate incorrectly or insufficiently annotated public ITS sequences from these fungal lineages. A third objective was to enrich the sequences with geographical and ecological metadata. The results – a total of 31,954 changes – are incorporated in and made available through the UNITE database for molecular identification of fungi (http://unite.ut.ee), including standalone FASTA files of sequence data for local BLAST searches, use in the next-generation sequencing analysis platforms QIIME and mothur, and related applications. The present initiative is just a beginning to cover the wide spectrum of plant pathogenic fungi, and we invite all researchers with pertinent expertise to join the annotation effort.
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  • Result 1-2 of 2
Type of publication
journal article (2)
Type of content
peer-reviewed (2)
Author/Editor
Abarenkov, Kessy (1)
Antonelli, Alexandre ... (1)
Bahram, Mohammad (1)
Bengtsson-Palme, Joh ... (1)
Larsson, Ellen, 1961 (1)
Martinsson, Svante, ... (1)
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Unterseher, Martin (1)
Kõljalg, Urmas (1)
Nilsson, R. Henrik, ... (1)
Larsson, Karl-Henrik ... (1)
Sánchez-García, Mari ... (1)
Ryberg, Martin (1)
Pawlowska, Julia (1)
Lindahl, Björn (1)
Niskanen, Tuula (1)
Tedersoo, Leho (1)
Liimatainen, Kare (1)
Tack, Ayco J. M. (1)
Stenlid, Jan (1)
Berlin, Anna (1)
Boberg, Johanna (1)
Anderson, Cajsa Lisa (1)
Friberg, Hanna (1)
Hyde, Kevin D. (1)
Liu, Jian Kui (1)
Nylinder, Nylinder, ... (1)
Hartmann, Martin (1)
Wang, Zheng, 1980 (1)
Branco, Sara (1)
Sousa, Filipe de, 19 ... (1)
Jumpponen, Ari (1)
Kauserud, Håvard (1)
Jung, Thomas (1)
Nylinder, Stephan, 1 ... (1)
Frøslev, Tobias Guld ... (1)
Desprez-Loustau, Mar ... (1)
Massot, Marie (1)
Toigo, Maude (1)
Fort, Tania (1)
Kaya, Ayse Gulden Ad ... (1)
Braun, Uwe (1)
Capdevielle, Xavier (1)
Cech, Thomas (1)
Chandelier, Anne (1)
Christova, Petya (1)
Corcobado, Tamara (1)
Dogmus, Tugba (1)
Dutech, Cyril (1)
Fabreguettes, Olivie ... (1)
d'Arcier, Julie Faiv ... (1)
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University
Swedish University of Agricultural Sciences (2)
University of Gothenburg (1)
Uppsala University (1)
Stockholm University (1)
Chalmers University of Technology (1)
Swedish Museum of Natural History (1)
Language
English (2)
Research subject (UKÄ/SCB)
Natural sciences (2)
Agricultural Sciences (2)
Medical and Health Sciences (1)

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