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  • Bylesjö, Max, et al. (author)
  • MASQOT-GUI : spot quality assessment for the two-channel microarray platform
  • 2006
  • In: Bioinformatics. - : Oxford University Press (OUP). - 1367-4803 .- 1367-4811. ; 22:20, s. 2554-2555
  • Journal article (peer-reviewed)abstract
    • MASQOT-GUI provides an open-source, platform-independent software pipeline for two-channel microarray spot quality control. This includes gridding, segmentation, quantification, quality assessment and data visualization. It hosts a set of independent applications, with interactions between the tools as well as import and export support for external software. The implementation of automated multivariate quality control assessment, which is a unique feature of MASQOT-GUI, is based on the previously documented and evaluated MASQOT methodology. Further abilities of the application are outlined and illustrated. AVAILABILITY: MASQOT-GUI is Java-based and licensed under the GNU LGPL. Source code and installation files are available for download at http://masqot-gui.sourceforge.net/
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Type of publication
journal article (1)
Type of content
peer-reviewed (1)
Author/Editor
Eriksson, Daniel (1)
Trygg, Johan (1)
Moritz, Thomas (1)
Jansson, Stefan, 195 ... (1)
Sjödin, Andreas (1)
Bylesjö, Max (1)
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Antti, Henrik (1)
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University
Umeå University (1)
Language
English (1)
Research subject (UKÄ/SCB)
Natural sciences (1)
Year
2006 (1)

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