11. |
- Szállás, A., et al.
(author)
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Characterization of the nitrogen split interstitial defect in wurtzite aluminum nitride using density functional theory
- 2014
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In: Journal of Applied Physics. - : American Institute of Physics (AIP). - 0021-8979 .- 1089-7550. ; 116:11, s. 113702-1-113702-5
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Journal article (peer-reviewed)abstract
- We carried out Heyd-Scuseria-Ernzerhof hybrid density functional theory plane wave supercell calculations in wurtzite aluminum nitride in order to characterize the geometry, formation energies, transition levels, and hyperfine tensors of the nitrogen split interstitial defect. The calculated hyperfine tensors may provide useful fingerprint of this defect for electron paramagnetic resonance measurement.
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12. |
- Szasz, K., et al.
(author)
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Theoretical and electron paramagnetic resonance studies of hyperfine interaction in nitrogen doped 4H and 6H SiC
- 2014
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In: Journal of Applied Physics. - : American Institute of Physics (AIP). - 0021-8979 .- 1089-7550. ; 115:7, s. 073705-
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Journal article (peer-reviewed)abstract
- Motivated by recent experimental findings on the hyperfine signal of nitrogen donor (N-C) in 4H and 6H SiC, we calculate the hyperfine tensors within the framework of density functional theory. We find that there is negligible hyperfine coupling with Si-29 isotopes when NC resides at h site both in 4H and 6H SiC. We observe measurable hyperfine coupling to a single Si-29 at k site in 4H SiC and k(1) site in 6H SiC. Our calculations unravel that such Si-29 hyperfine coupling does not occur at k(2) site in 6H SiC. Our findings are well corroborated by our new electron paramagnetic resonance studies in nitrogen doped 6H SiC.
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13. |
- Tien Son, Nguyen, et al.
(author)
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Negative-U System of Carbon Vacancy in 4H-SiC
- 2012
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In: Physical Review Letters. - : American Physical Society. - 0031-9007 .- 1079-7114. ; 109:18, s. 187603-
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Journal article (peer-reviewed)abstract
- Using electron paramagnetic resonance (EPR), energy levels of the carbon vacancy (V-C) in 4H-SiC and its negative-U properties have been determined. Combining EPR and deep-level transient spectroscopy we show that the two most common defects in as-grown 4H-SiC-the Z(1/2) lifetime-limiting defect and the EH7 deep defect-are related to the double acceptor (2 - vertical bar 0) and single donor (0 vertical bar +) levels of V-C, respectively.
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14. |
- Tran, Ngoc Hieu, et al.
(author)
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Genetic profiling of Vietnamese population from large-scale genomic analysis of non-invasive prenatal testing data
- 2020
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In: Scientific Reports. - : Springer Science and Business Media LLC. - 2045-2322. ; 10:1
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Journal article (peer-reviewed)abstract
- The under-representation of several ethnic groups in existing genetic databases and studies have undermined our understanding of the genetic variations and associated traits or diseases in many populations. Cost and technology limitations remain the challenges in performing large-scale genome sequencing projects in many developing countries, including Vietnam. As one of the most rapidly adopted genetic tests, non-invasive prenatal testing (NIPT) data offers an alternative untapped resource for genetic studies. Here we performed a large-scale genomic analysis of 2683 pregnant Vietnamese women using their NIPT data and identified a comprehensive set of 8,054,515 single-nucleotide polymorphisms, among which 8.2% were new to the Vietnamese population. Our study also revealed 24,487 disease-associated genetic variants and their allele frequency distribution, especially 5 pathogenic variants for prevalent genetic disorders in Vietnam. We also observed major discrepancies in the allele frequency distribution of disease-associated genetic variants between the Vietnamese and other populations, thus highlighting a need for genome-wide association studies dedicated to the Vietnamese population. The resulted database of Vietnamese genetic variants, their allele frequency distribution, and their associated diseases presents a valuable resource for future genetic studies.
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15. |
- Trinh, Thang, et al.
(author)
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Background risk of breast cancer and the association between physical activity and mammographic density
- 2015
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In: Breast Cancer Research. - : BIOMED CENTRAL LTD. - 1465-5411 .- 1465-542X. ; 17
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Journal article (peer-reviewed)abstract
- Introduction High physical activity has been shown to decrease the risk of breast cancer, potentially by a mechanism that also reduces mammographic density. We tested the hypothesis that the risk of developing breast cancer in the next 10 years according to the Tyrer-Cuzick prediction model influences the association between physical activity and mammographic density. Methods We conducted a population-based cross-sectional study of 38,913 Swedish women aged 4074 years. Physical activity was assessed using the validated web-questionnaire Active-Q and mammographic density was measured by the fully automated volumetric Volpara method. The 10-year risk of breast cancer was estimated using the Tyrer-Cuzick (TC) prediction model. Linear regression analyses were performed to assess the association between physical activity and volumetric mammographic density and the potential interaction with the TC breast cancer risk. Results Overall, high physical activity was associated with lower absolute dense volume. As compared to women with the lowest total activity level (<40 metabolic equivalent hours [MET-h] per day), women with the highest total activity level (>= 50 MET-h/day) had an estimated 3.4 cm(3) (95% confidence interval, 2.3-4.7) lower absolute dense volume. The inverse association was seen for any type of physical activity among women with <3.0% TC 10-year risk, but only for total and vigorous activities among women with 3.0-4.9% TC risk, and only for vigorous activity among women with >= 5.0% TC risk. The association between total activity and absolute dense volume was modified by the TC breast cancer risk (P-interaction = 0.05). As anticipated, high physical activity was also associated with lower non-dense volume. No consistent association was found between physical activity and percent dense volume. Conclusions Our results suggest that physical activity may decrease breast cancer risk through reducing mammographic density, and that the physical activity needed to reduce mammographic density may depend on background risk of breast cancer.
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16. |
- Trinh, Thang
(author)
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Determinants of breast cancer risk : focusing on mammographic density
- 2015
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Doctoral thesis (other academic/artistic)abstract
- Breast cancer is the most common cancer and also one of the leading causes of cancer death among women worldwide. Since most known factors associated with breast cancer risk are difficult to influence, the potential of lifestyle factors, which are modifiable, in breast cancer prevention has recently been emphasised. Studies have shown a reduced risk of breast cancer among women who are more physically active, and an increased risk among women with higher alcohol consumption or cigarette smoking. These lifestyle factors have been hypothesised to influence breast cancer risk through a mechanism that involves mammographic density, one of the strongest risk factors of the disease. Moreover, whether such associations might be modified by the women’s background risk of breast cancer is unclear. We therefore used data from the KARMA (KARolinska MAmmography) study to investigate the potential influence of background breast cancer risk on the association between physical activity (Study I, n = 38,913), alcohol consumption (Study II, n = 53,060), and cigarette smoking (Study III, n = 53,728) and mammographic density. These lifestyle factors were assessed using self-administrated web-based questionnaires. Mammographic density was estimated using the fully-automated volumetric Volpara method and expressed as absolute dense volume, non-dense volume, and per cent dense volume. The Tyrer-Cuzick (TC) prediction model was used to estimate the individual background risk of developing breast cancer in the next 10 years. In Study I, higher levels of physical activity were associated with a lower absolute dense breast volume and non-dense (adipose) breast volume, but a higher per cent dense breast volume among all women. After taking the TC 10-year risk of breast cancer into consideration, an association with lower absolute density was seen for all types of physical activity among women at low (< 3.0%) TC risk, for total and vigorous activities among women at moderate (3.0-4.9%) TC risk, and only for vigorous activity among women at high (≥ 5.0%) TC risk. In Study II, among all women we found an overall association between alcohol consumption and absolute and per cent dense breast volumes. Furthermore, alcohol consumption was only associated with a higher absolute dense volume among high-risk women. In Study III, current cigarette smoking was associated with lower absolute and per cent dense volumes, and this association was not found to be modified by TC 10-year background breast cancer risk. However, with respect to breast cancer risk, this finding should be viewed in light of the carcinogenic effects of cigarette smoking. In the last study, we used prospective cohort data of 58,441 Swedish women of whom 522 developed invasive breast cancer. Overall, women with higher alcohol consumption had an increased risk of breast cancer compared to those with no alcohol consumption. After taking the TC background 10-year risk of breast cancer into account, alcohol consumption was only associated with breast cancer risk among women at moderate background risk.
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17. |
- Trinh, Xuan Thang, et al.
(author)
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Electron paramagnetic resonance studies of carbon interstitial related defects in 4H-SiC
- 2015
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Other publication (other academic/artistic)abstract
- In n-type 4H-SiC grown by chemical vapor deposition and irradiated by low-energy (250 keV) electrons, an electron paramagnetic resonance center, labeled EI8a, was observed at room temperature. A short anneal at temperatures in the range of 300-500 °C in darkness changes EI8a to a new center, labeled EI8b, which can be converted back by illumination at room temperature. We show that EI8a and EI8b are the two different configurations of the same defect, labeled EI8, with C1h symmetry and an electron spin S=1/2. The EI8 center is stable up to ~650 °C and annealed out at ~800 °C. Based on the observed hyperfine structures due to the hyperfine interaction between the electron spin and the nuclear spins of four 29Si atoms and three 13C atoms, the EI8 center is suggested to be related to a carbon interstitial cluster.
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18. |
- Trinh, Xuan Thang, et al.
(author)
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Electron Paramagnetic Resonance Studies of Nb in 6H-SiC
- 2013
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In: Materials Science Forum (Volumes 740 - 742). - : Trans Tech Publications Inc.. ; , s. 385-388
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Conference paper (peer-reviewed)abstract
- Defects in unintentionally Nb-doped 6H-SiC grown by high-temperature chemical vapor deposition were studied by electron paramagnetic resonance (EPR). An EPR spectrum with a hyperfine (hf) structure consisting of ten equal-intensity lines was observed. The hf structure is identified to be due to the hf interaction between an electron spin S=1/2 and a nuclear spin of 93Nb. The hf interaction due to the interaction three nearest Si neighbors was also observed, suggesting the involvement of the C vacancy (VC) in the defect. Only one EPR spectrum was observed in 6H-SiC polytype. The obtained spin-Hamiltonian parameters are similar to that of the Nb-related EPR defect in 4H-SiC, suggesting that the EPR center in 6H-SiC is the NbSiVC complex in the neutral charge state, NbSiVC0. Photoexcitation EPR experiments suggest that the single negative charge state of the NbSiVC complex is located at ~1.3 eV below the conduction band minimum.
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19. |
- Trinh, Xuan Thang
(author)
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Electron Paramagnetic Resonance studies of negative-U centers in AlGaN and SiC
- 2014
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Licentiate thesis (other academic/artistic)abstract
- Silicon (Si) is the most commonly used n-type dopant in AlGaN, but the conductivity of Si-doped AlxGa1-xN was often reported to drop abruptly at high Al content (x>0.7) and the reason was often speculated to be due to either compensation by deep levels or self-compensation of the so-called DX (or negative-U) center. Understanding the electronic structure of Si and carrier compensation processes is the essential for improving the n-type doping of high-Al-content AlxGa1-xN. In our studies of Si-doped AlGaN layers grown by metal-organic chemical vapor deposition, Electron Paramagnetic Resonance (EPR) was used to study the electronic structure of Si in high-Al-content AlxGa1-xN.From the temperature dependence of the concentration of the Si donor on the neutral charge state Ed determined by EPR, we showed that Si already forms a stable DX center in AlxGa1-xN with x ~0.77. However, with the Fermi level locating only ~3 meV below Ed, Si still behaves as a shallow donor and high conductivity at room temperature could be achieved in Al0.77Ga0.23N:Si layers. In samples with the concentration of the residual oxygen (O) impurity larger than that of Si, we observed no carrier compensation by O in Al0.77Ga0.23N:Si layers, suggesting that at such Al content, O does not seem to hinder the n-type doping in the material. The result is presented in paper 1.In paper 2, we determined the dependence of the EDX level of Si on the Al content in AlxGa1-xN:Si layers (0.79≤x≤1) with the Si concentration of ~2×1018 cm-3 and the concentrations of residual O and C impurities of about an order of magnitude lower (~1÷2×1017 cm-3). We found the coexistence of two DX centers (stable and metastable ones) of Si in AlxGa1-xN for x≥0.84. For the stable DX center, abruptly deepening of EDX with increasing of the Al content for x≥0.83 was observed, explaining the drastic decrease of the conductivity as often reported in previous transport studies. For the metastable DX center, the EDX level remains close to Ed for x=0.84÷1 (~11 meV for AlN).The Z1/Z2 defect is the most common deep level revealed by Deep Level Transient Spectroscopy (DLTS) in 4H-SiC epitaxial layers grown by chemical vapor deposition (CVD). It has previously been shown by DLTS to be a negative-U system which is more stable with capturing two electrons. The center is also known to be the lifetime killer in asgrown CVD material and, therefore, attracts much attention. Despite nearly two decades of intensive studies, including theoretical calculations and different experimental techniques, the origin of the Z1/Z2 center remains unclear. EPR is known to be a powerful method for defect identification, but a direct correlation between EPR and DLTS is difficult due to different requirements on samples for each technique. Using high n-type 4H-SiC CVD free-standing layers irradiated with lowenergy (250 keV) electrons, which mainly displace carbon atoms creating C vacancies, C interstitials and their associated defects, it was possible to increase the irradiation dose, allowing the application of EPR and DLTS on the same samples. Combining EPR, DLTS and supercell calculations, we identified the negatively charged carbon vacancy at the quasi-cubic (k) site and observed clear negative-U behaviors of the negative carbon vacancies at both hexagonal (h) and k sites. Our results showed that the Z1/Z2 center is related to the (2-|0) level of VC and its higher-lying levels Z1 and Z2 are related to the (-|0) levels of VC at the h and k sites, respectively. The result is presented in paper 3.
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20. |
- Trinh, Xuan Thang
(author)
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Electron Paramagnetic Resonance Studies of Point Defects in AlGaN and SiC
- 2015
-
Doctoral thesis (other academic/artistic)abstract
- Point defects in semiconductor materials are known to have important influence on the performance of electronic devices. For defect control, knowledge on the model of defects and their properties is required. Information on defects, such as the symmetry and the localization of spins, is essential for identification of defects and understanding their electronic structure. Such information can be obtained from Electron Paramagnetic Resonance (EPR). In many cases, the energy levels of defects can be determined from photoexcitation EPR (photo-EPR) or temperature dependence of the EPR signal. The thesis contains six papers, focusing on the identification and electronic structure investigation of defects and impurities in AlxGa1-xN (x~0.7-1) and silicon carbide (SiC) using EPR in combination with other electrical characterizations and density functional theory calculations.The two first papers concern EPR studies of silicon (Si) in AlGaN alloys. Due to its direct and wide band gap which can be tailored from 3.4 eV for GaN to 6.2 eV for AlN, high-Al-content wurtzite AlxGa1-xN (x≥0.7) has been considered as a promising material for fabrication of compact, high-efficiency and non-toxic deep ultraviolet light-emitting diodes (LEDs) and laser diodes (LDs) for replacing low-efficiency and toxic mercury lamps in water/air purification and sterilization. Si is commonly used for n-type doping in AlGaN and AlN, but the conductivity of Si-doped AlxGa1-xN was often reported to drop abruptly at high Al content (x>0.7) and the reason was often speculated to be due to either carrier compensation by other deep levels or Si itself when it transforms from a shallow donor to a DX (or negative-U) center which acts as an acceptor. In paper 1, we showed that Si already forms a stable DX center in AlxGa1-xN with x ~0.77. However, with the Fermi level locating only ~3 meV below the neutral charge state, Ed, Si still behaves as a shallow donor. Negligible carrier compensation by oxygen (O) in Al0.77Ga0.23N:Si layers was observed, suggesting that at such Al content, O does not seem to hinder the n-type doping in the material. In paper 2, we found the coexistence of two Si DX centers, the stable DX1 and the metastable DX2, in AlxGa1-xN for x≥0.84. For the stable DX1 center, abrupt deepening of the energy level of the negative charge state DX–, EDX, which determines the ionization energy Ea of the Si donor, with increasing of the Al content for x≥0.83 was observed. The dependence of Ea on the Al content in AlxGa1-xN:Si layers (0.79≤x≤1) was determined. The results explain the drastic decrease of the conductivity as often reported for AlxGa1-xN:Si in previous transport studies. For the metastable DX2 center, we found that the EDX level remains close to Ed for x=0.84÷1.SiC is a wide band-gap semiconductor having high-thermal conductivity, high breakdown field, and large saturated electron drift velocity which are essential properties for high-voltage and high-power devices. In paper 3, the identification of niobium (Nb) in 4Hand 6H-SiC grown by high-temperature chemical vapor deposition (CVD) by EPR and theoretical calculations is presented. We showed that the incorporated Nb formed asymmetric split-vacancy defect (NbSiVC) in which Nb locates in a divacancy, closer to the Si vacancy, and prefers only the hexagonal-hexagonal configuration. In papers 4 and 5, we present the identification and the electronic structure of the negative-U Z1/Z2 center in 4HSiC. The Z1/Z2 defect is known to be the most common deep level revealed by Deep Level Transient Spectroscopy (DLTS) in 4H-SiC epitaxial layers grown by CVD. The center is also known to be the lifetime killer in as-grown CVD material and, therefore, attracts much attention. Using high-doped n-type free-standing 4H-SiC layers irradiated with low-energy (250 keV) electrons, which mainly displace carbon atoms creating C vacancies (VC), C interstitials and their associated defects, it was possible to increase the irradiation dose and, hence, the defect concentration, allowing the application of EPR and DLTS on the same samples. In paper 4, using EPR, photo-EPR, DLTS and capacitance-voltage measurements, we showed that the Z1/Z2 center is related to the (2-|0) level of VC and its higher-lying levels Z1 and Z2 are related to the (-|0) levels of VC at the hexagonal (h) and quasi-cubic (k) sites, respectively. In paper 5, combining EPR and supercell calculations, the negatively charged VC at the k-site was identified. We obtained the excellent agreement in the energy levels of Z1/Z2 determined by DLTS and energy levels of VC calculated by supercell calculations and observed clear negative-U behaviors of the negatively charged VC at both k and h-sites by EPR measurements, consolidating our assignment of the Z1/Z2 levels to the negatively charged states of VC. In paper 6, we studied a defect related to displaced C atoms in n-type 4H-SiC irradiated by low-energy electrons. In irradiated layers, we observed an EPR center at room temperature. After annealing at temperatures in the range of 300-500 °C, this center transforms to a second configuration which is observed in darkness and can be changed back to the first configuration under illumination. Based on the observed 29Si and 13C hyperfine structures, two observed configurations of the EPR center were suggested to be related to different configurations of a carbon interstitial cluster. The annealing, bistable behaviors and energy levels of this EPR center are discussed.
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