| 1. |
- Wang, Zhaoming, et al.
(author)
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Imputation and subset-based association analysis across different cancer types identifies multiple independent risk loci in the TERT-CLPTM1L region on chromosome 5p15.33
- 2014
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In: Human Molecular Genetics. - : Oxford University Press (OUP). - 0964-6906 .- 1460-2083. ; 23:24, s. 6616-6633
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Journal article (peer-reviewed)abstract
- Genome-wide association studies (GWAS) have mapped risk alleles for at least 10 distinct cancers to a small region of 63 000 bp on chromosome 5p15.33. This region harbors the TERT and CLPTM1L genes; the former encodes the catalytic subunit of telomerase reverse transcriptase and the latter may play a role in apoptosis. To investigate further the genetic architecture of common susceptibility alleles in this region, we conducted an agnostic subset-based meta-analysis (association analysis based on subsets) across six distinct cancers in 34 248 cases and 45 036 controls. Based on sequential conditional analysis, we identified as many as six independent risk loci marked by common single-nucleotide polymorphisms: five in the TERT gene (Region 1: rs7726159, P = 2.10 × 10(-39); Region 3: rs2853677, P = 3.30 × 10(-36) and PConditional = 2.36 × 10(-8); Region 4: rs2736098, P = 3.87 × 10(-12) and PConditional = 5.19 × 10(-6), Region 5: rs13172201, P = 0.041 and PConditional = 2.04 × 10(-6); and Region 6: rs10069690, P = 7.49 × 10(-15) and PConditional = 5.35 × 10(-7)) and one in the neighboring CLPTM1L gene (Region 2: rs451360; P = 1.90 × 10(-18) and PConditional = 7.06 × 10(-16)). Between three and five cancers mapped to each independent locus with both risk-enhancing and protective effects. Allele-specific effects on DNA methylation were seen for a subset of risk loci, indicating that methylation and subsequent effects on gene expression may contribute to the biology of risk variants on 5p15.33. Our results provide strong support for extensive pleiotropy across this region of 5p15.33, to an extent not previously observed in other cancer susceptibility loci.
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| 2. |
- Andersson, August, et al.
(author)
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(14)C-Based source assessment of soot aerosols in Stockholm and the Swedish EMEP-Aspvreten regional background site
- 2011
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In: Atmospheric Environment. - : Elsevier BV. - 1352-2310 .- 1873-2844. ; 45:1, s. 215-222
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Journal article (peer-reviewed)abstract
- Combustion-derived soot or black carbon (BC) in the atmosphere has a strong influence on both climate and human health. In order to propose effective mitigation strategies for BC emissions it is of importance to investigate geographical distributions and seasonal variations of BC emission sources. Here, a radiocarbon methodology is used to distinguish between fossil fuel and biomass burning sources of soot carbon (SC). SC is isolated for subsequent off-line (14)C quantification with the chemothermal oxidation method at 375 degrees C (CTO-375 method), which reflects a recalcitrant portion of the BC continuum known to minimize inadvertent inclusion of any non-pyrogenic organic matter. Monitored wind directions largely excluded impact from the Stockholm metropolitan region at the EMEP-Aspvreten rural station 70 km to the south-west. Nevertheless, the Stockholm city and the rural stations yielded similar relative source contributions with fraction biomass (f(biomass)) for fall and winter periods in the range of one-third to half. Large temporal variations in (14)C-based source apportionment was noted for both the 6 week fall and the 4 month winter observations. The f(biomass) appeared to be related to the SC concentration suggesting that periods of elevated BC levels may be caused by increased wood fuel combustion. These results for the largest metropolitan area in Scandinavia combine with other recent (14)C-based studies of combustion-derived aerosol fractions to suggest that biofuel combustion is contributing a large portion of the BC load to the northern European atmosphere.
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| 3. |
- Andersson Granberg, Tobias, et al.
(author)
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Tåla : Trygghetsskapande åtgärder för landsbygden
- 2010
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Reports (other academic/artistic)abstract
- I april 2010 gav regeringen i uppdrag till Myndigheten för samhällsskydd och beredskap (MSB) att i ett projekt öka säkerheten på landsbygden genom nya former för räddning och respons. Inom ramen för ovanstående uppdrag, vilket benämns ”Samhällsviktig samverkan i landsbygd” har CARER – Centrum för respons- och räddningssystem – vid Linköpings universitet fått i uppdrag av MSB att inventera vilka behov och resurser för säkerhet och trygghet som existerar på lands- och glesbygd, samt undersöka vilka andra projekt och initiativ som föregått detta, nationellt och internationellt. CARERs projekt, som görs inom ramen för regeringsuppdraget, benämns Trygghetshöjande åtgärder för landsbygden (TÅLA).TÅLA har genomförts som fyra sammanhängande delstudier där de två första delstudierna använder kvalitativ metodik, främst intervjuer, och syftar till att skapa en förståelse för den upplevda tryggheten på lands- och glesbygden, samt utröna vad den består i och hur den kan stärkas. Delstudie 3 syftar till att kvantitativt uttrycka behov och resurser för säkerhet och trygghet på landsoch glesbygd genom ett urval av indikatorer. Delstudie 4 syftar till att ge en överblick över tidigare forskning och utveckling på området.Några generella slutsatser som kan dras från TÅLA-projektets olika delstudier är att det finns en god medvetenhet hos boende i land- och glesbygd för att det kan ta tid innan hjälp kan fås ifrån de traditionella räddningssystemen (som till exempel polis eller räddningstjänst), ett faktum som också kan bekräftas numerärt. Vissa indikatorer tyder dessutom på att boende på lands- och glesbygden är mer drabbade av olyckor än boende i tätort, vilket ger ett ökat behov av de aktuella resurserna. Detta har lett till att nya typer av lösningar har utvecklats, oftast av de boende, för att bistå vid olyckor, många baserade på självhjälp och frivillighet.Tydligt är också att trygghet omfattar mer än bara blåljusverksamheter och stöd från det allmänna. Här inkluderas också behov som el, vatten och möjligheten att handla mat. En stor del av den upplevda tryggheten hos befolkningen kommer från det sociala nätverk som finns i respektive by. Möjligheter till kommunikation är centralt och det är när individen är ensam utan möjlighet till kontakt med omvärlden som den största otryggheten infinner sig.Det framkom under projektet flera exempel på samverkan och de som medverkar framhåller vikten av att känna varandra innan insatsen, för att bästa möjliga resultat ska uppnås. Såväl de båda kvalitativa studierna som kunskapsöversikten pekar på att en trolig väg till framgång för en ökad säkerhet och trygghet på landsbygden bygger på att de lokala resurserna och strukturerna nyttjas i samverkan med de traditionella räddningsresurserna. Detta innebär att det bör vara möjligt att stärka dels de boendes möjligheter att hjälpa sig själva och att hjälpa varandra, men också att nyttja organisationer som idag inte tillhör blåljusmyndigheterna för att i samverkan med räddningstjänsten, sjukvården och polisen kunna bistå vid olyckor, akuta sjukdomsförlopp och andra relevanta händelser. Viktigt att beakta i detta sammanhang är då att använda de befintliga strukturer som existerar bland såväl boende som olika organisationer, för att på bästa sätt kunna dra nytta av den lokala kunskap, de resurser och det engagemang som existerar.
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| 4. |
- Ivarsson, David, et al.
(author)
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Guided internet-delivered cognitive behavior therapy for post-traumatic stress disorder : a randomized controlled trial
- 2014
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In: Internet Interventions. - : Elsevier. - 2214-7829. ; 1:1, s. 33-40
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Journal article (peer-reviewed)abstract
- The aim of this randomized controlled trial was to investigate the effects of guided internet-based cognitive behavior therapy (ICBT) for posttraumatic stress disorder (PTSD). Sixty-two participants with chronic PTSD, as assessed by the Clinician-administered PTSD Scale, were recruited via nationwide advertising and randomized to either treatment (n = 31) or delayed treatment attention control (n = 31). The ICBT treatment consisted of 8 weekly text-based modules containing psychoeducation, breathing retraining, imaginal and in vivo exposure, cognitive restructuring, and relapse prevention. Therapist support and feedback on homework assignment were given weekly via an online contact handling system. Assessments were made at baseline, post-treatment, and at 1-year follow-up. Main outcome measures were the Impact of Events Scale — Revised (IES-R) and the Posttraumatic Stress Diagnostic Scale (PDS). Results showed significant reductions of PTSD symptoms (between group effect on the IES-R Cohen's d = 1.25, and d = 1.24 for the PDS) compared to the control group. There were also effects on depression symptoms, anxiety symptoms, and quality of life. The results at one-year follow-up showed that treatment gains were maintained. In sum, these results suggest that ICBT with therapist support can reduce PTSD symptoms significantly.
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| 5. |
- Kirillova, Elena N., et al.
(author)
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C-13- and C-14-based study of sources and atmospheric processing of water-soluble organic carbon (WSOC) in South Asian aerosols
- 2013
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In: Journal of Geophysical Research - Atmospheres. - : American Geophysical Union (AGU). - 2169-897X .- 2169-8996. ; 118:2, s. 614-626
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Journal article (peer-reviewed)abstract
- Water-soluble organic carbon (WSOC) is typically a large component of carbonaceous aerosols with a high propensity for inducing cloud formation. The sources of WSOC, which may be both of primary and secondary origins, are in general poorly constrained. This study assesses the concentrations and dual-carbon isotope (14C and 13C) signatures of South Asian WSOC during a 15-month continuous campaign in 2008-2009. Total suspended particulate matter samples were collected at Sinhagad (SINH) India and at the Maldives Climate Observatory at Hanimaadhoo (MCOH). Monsoon-driven meteorology yields significant WSOC concentration differences between the dry winter season (0.94±0.43 μg m-3 MCOH and 3.6±2.3 μg m-3 SINH) and the summer monsoon season (0.10±0.04 μg m-3 MCOH and 0.35±0.21 μg m-3 SINH). Radiocarbon-based source apportionment of WSOC shows the dominance of biogenic/biomass combustion sources but also a substantial anthropogenic fossil-fuel contribution (17±4% MCOH and 23±4% SINH). Aerosols reaching MCOH after long-range over-ocean transport were enriched by 3-4‰ in δ13C-WSOC relative to SINH. This is consistent with particle-phase aging processes influencing the δ13C-WSOC signal in the South Asian regional receptor atmosphere.
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| 6. |
- Kirillova, Elena N., et al.
(author)
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Natural Abundance C-13 and C-14 Analysis of Water-Soluble Organic Carbon in Atmospheric Aerosols
- 2010
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In: Analytical Chemistry. - : American Chemical Society (ACS). - 0003-2700 .- 1520-6882. ; 82:19, s. 7973-7978
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Journal article (peer-reviewed)abstract
- Water-soluble organic carbon (WSOC) constitutes a large fraction of climate-forcing organic aerosols in the atmosphere, yet the sources of WSOC are poorly constrained. A method was developed to measure the stable carbon isotope (delta C-13) and radiocarbon (delta C-14) composition of WSOC for apportionment between fossil fuel and different biogenic sources. Synthetic WSOC test substances and ambient aerosols were employed to investigate the effect of both modern and fossil carbon contamination and any method-induced isotope fractionation. The method includes extraction of aerosols collected on quartz filters followed by purification and preparation for off-line delta C-13 and Delta C-14 determination. The preparative freeze-drying step for isotope analysis yielded recoveries of only similar to 70% for ambient aerosols and WSOC probes. However, the delta C-13 of the WSOC isolates were in agreement with the delta C-13 of the unprocessed starting material, even for the volatile oxalic acid probe (6.59 +/- 0.37 parts per thousand vs 6.33 +/- 0.31 parts per thousand; 2 sd). A C-14-fossil phthalic acid WSOC probe returned a fraction modern biomass of <0.008 whereas a C-14-modern sucrose sucrose standard yielded a fraction modern of >0.999, indicating the Delta C-14-WSOC method to be free of both fossil and contemporary carbon contamination. Application of the (delta C-13/Delta C-14-WSOC method to source apportion climate-affecting aerosols was illustrated be constraining that WSOC in ambient Stockholm aerosols were 88% of contemporary biogenic C3 plant origin.
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| 7. |
- Pilemalm, Sofie, 1973-, et al.
(author)
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Emergency response in rural areas : How new ways of organizing and supporting first responders can apply to crisis management
- 2012
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In: Proceedings of the 9th International ISCRAM Conference. - 9780864913326
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Conference paper (other academic/artistic)abstract
- In this study, security and safety in rural parts of Sweden is investigated. New ways of organizing for efficient response can be found in the extended collaboration between societal sectors and in utilizing the local social capital. New categories of first responders and their requirements are identified and we propose non-technical and technical solutions as support. The results’ application to large-scale crises is discussed.
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| 8. |
- Pilemalm, Sofie, et al.
(author)
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Emergency Response in Rural Areas
- 2013
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In: International Journal of Information Systems for Crisis Response and Management. - : IGI Global. - 1937-9390 .- 1937-9420. ; 5:2, s. 19-31
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Journal article (peer-reviewed)abstract
- In this study, security and safety in rural parts of Sweden are investigated. New ways of organizing for efficient response can be found in the extended collaboration between societal sectors and in the utilization of local social capital. New categories of first responders and their requirements are identified and technical and non-technical solutions as support are proposed. The solutions include e.g. mobile applications and a technical infrastructure making it possible for volunteers to obtain information about events requiring emergency response. Emergency management in rural areas shows several similarities to large-scale crises, e.g. in terms of insufficient infrastructure available and the need to use local resources in the immediate aftermath of the event. Therefore, the results of the study can be transferable to large-scale crises.
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| 9. |
- Ritte, Rebecca, et al.
(author)
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Height, age at menarche and risk of hormone receptor-positive and -negative breast cancer : A cohort study
- 2013
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In: International Journal of Cancer. - : Wiley-Blackwell. - 0020-7136 .- 1097-0215. ; 132:11, s. 2619-2629
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Journal article (peer-reviewed)abstract
- Associations of breast cancer overall with indicators of exposures during puberty are reasonably well characterized; however, uncertainty remains regarding the associations of height, leg length, sitting height and menarcheal age with hormone receptor-defined malignancies. Within the European Prospective Investigation into Cancer and Nutrition cohort, Cox proportional hazards models were used to describe the relationships of adult height, leg length and sitting height and age at menarche with risk of estrogen and progesterone receptor negative (ER-PR-) (n = 990) and ER+PR+ (n = 3,524) breast tumors. Height as a single risk factor was compared to a model combining leg length and sitting height. The possible interactions of height, leg length and sitting height with menarche were also analyzed. Risk of both ER-PR- and ER+PR+ malignancies was positively associated with standing height, leg length and sitting height and inversely associated with increasing age at menarche. For ER+PR+ disease, sitting height (hazard ratios: 1.14[95% confidence interval: 1.081.20]) had a stronger risk association than leg length (1.05[1.001.11]). In comparison, for ER-PR- disease, no distinct differences were observed between leg length and sitting height. Women who were tall and had an early menarche (13 years) showed an almost twofold increase in risk of ER+PR+ tumors but no such increase in risk was observed for ER-PR- disease. Indicators of exposures during rapid growth periods were associated with risks of both HR-defined breast cancers. Exposures during childhood promoting faster development may establish risk associations for both HR-positive and negative malignancies. The stronger associations of the components of height with ER+PR+ tumors among older women suggest possible hormonal links that could be specific for postmenopausal women.
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| 10. |
- Ritte, Rebecca, et al.
(author)
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Reproductive factors and risk of hormone receptor positive and negative breast cancer : a cohort study
- 2013
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In: BMC Cancer. - : BioMed Central. - 1471-2407 .- 1471-2407. ; 13, s. Article Number: 584-
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Journal article (peer-reviewed)abstract
- Background: The association of reproductive factors with hormone receptor (HR)-negative breast tumors remains uncertain. Methods: Within the EPIC cohort, Cox proportional hazards models were used to describe the relationships of reproductive factors (menarcheal age, time between menarche and first pregnancy, parity, number of children, age at first and last pregnancies, time since last full-term childbirth, breastfeeding, age at menopause, ever having an abortion and use of oral contraceptives [OC]) with risk of ER-PR-(n = 998) and ER+PR+ (n = 3,567) breast tumors. Results: A later first full-term childbirth was associated with increased risk of ER+PR+ tumors but not with risk of ER-PR-tumors (= 35 vs. = 19 years HR: 1.47 [95% CI 1.15-1.88] p(trend) < 0.001 for ER+PR+ tumors; = 35 vs. = 19 years HR: 0.93 [95% CI 0.53-1.65] p(trend) = 0.96 for ER-PR-tumors; P-het = 0.03). The risk associations of menarcheal age, and time period between menarche and first full-term childbirth with ER-PR-tumors were in the similar direction with risk of ER+PR+ tumors (p(het) = 0.50), although weaker in magnitude and statistically only borderline significant. Other parity related factors such as ever a full-term birth, number of births, age-and time since last birth were associated only with ER+PR+ malignancies, however no statistical heterogeneity between breast cancer subtypes was observed. Breastfeeding and OC use were generally not associated with breast cancer subtype risk. Conclusion: Our study provides possible evidence that age at menarche, and time between menarche and first full-term childbirth may be associated with the etiology of both HR-negative and HR-positive malignancies, although the associations with HR-negative breast cancer were only borderline significant.
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