| 1. |
- Barbu, M., et al.
(author)
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Sclerosing Aortic and Coronary Arteritis Due to IgG4-Related Disease
- 2017
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In: Annals of Thoracic Surgery. - : Elsevier BV. - 0003-4975. ; 103:6
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Journal article (peer-reviewed)abstract
- We present the case of a 55-year-old woman admitted for a coronary artery bypass operation because of three-vessel coronary artery disease based on angiographic findings and clinical symptoms. Unexpected intraoperative findings with diffuse tissue thickening of the ascending aorta and coronary arteries indicated an alternate pathogenesis rather than coronary artery atherosclerosis. Histopathologic findings and clinical evaluation could confirm IgG4-related disease (IgG4-RD). IgG4-RD is a newly recognized fibroinflammatory condition that can present in a variety of organs and is characterized by common histopathologic features. Low disease awareness among clinicians makes this condition underdiagnosed. © 2017 The Society of Thoracic Surgeons
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| 2. |
- Robledo-Abad, Carmenza, et al.
(author)
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Bioenergy production and sustainable development: science base for policy-making remains limited
- 2017
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In: Global Change Biology Bioenergy. - : Wiley. - 1757-1693 .- 1757-1707. ; 9:3, s. 541-556
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Journal article (peer-reviewed)abstract
- The possibility of using bioenergy as a climate change mitigation measure has sparked a discussion of whether and how bioenergy production contributes to sustainable development. We undertook a systematic review of the scientific literature to illuminate this relationship and found a limited scientific basis for policy-making. Our results indicate that knowledge on the sustainable development impacts of bioenergy production is concentrated in a few well-studied countries, focuses on environmental and economic impacts, and mostly relates to dedicated agricultural biomass plantations. The scope and methodological approaches in studies differ widely and only a small share of the studies sufficiently reports on context and/or baseline conditions, which makes it difficult to get a general understanding of the attribution of impacts. Nevertheless we identified regional patterns of positive or negative impacts for all categories – environmental, economic, institutional, social and technological. In general, economic and technological impacts were more frequently reported as positive, while social and environmental impacts were more frequently reported as negative (with the exception of impacts on direct substitution of GHG emission from fossil fuel). More focused and transparent research is needed to validate these patterns and develop a strong science underpinning for establishing policies and governance agreements that prevent/mitigate negative and promote positive impacts from bioenergy production.
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| 3. |
- Kawakatsu, Taiji, et al.
(author)
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Epigenomic Diversity in a Global Collection of Arabidopsis thaliana Accessions
- 2016
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In: Cell. - : Elsevier. - 0092-8674 .- 1097-4172. ; 166:2, s. 492-505
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Journal article (peer-reviewed)abstract
- The epigenome orchestrates genome accessibility, functionality, and three-dimensional structure. Because epigenetic variation can impact transcription and thus phenotypes, it may contribute to adaptation. Here, we report 1,107 high-quality single-base resolution methylomes and 1,203 transcriptomes from the 1001 Genomes collection of Arabidopsis thaliana. Although the genetic basis of methylation variation is highly complex, geographic origin is a major predictor of genome-wide DNA methylation levels and of altered gene expression caused by epialleles. Comparison to cistrome and epicistrome datasets identifies associations between transcription factor binding sites, methylation, nucleotide variation, and co-expression modules. Physical maps for nine of the most diverse genomes reveal how transposons and other structural variants shape the epigenome, with dramatic effects on immunity genes. The 1001 Epigenomes Project provides a comprehensive resource for understanding how variation in DNA methylation contributes to molecular and non-molecular phenotypes in natural populations of the most studied model plant.
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| 4. |
- Mahanta, C., et al.
(author)
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Hydrogeochemical controls on mobilization of arsenic in groundwater of a part of Brahmaputra river floodplain, India
- 2015
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In: Journal of Hydrology: Regional Studies. - : Elsevier BV. - 2214-5818.
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Journal article (peer-reviewed)abstract
- Study region: Arsenic enriched groundwater regime within low-industrialized Brahmaputra floodplains in Assam, NE India. Study focus: We examined the origin, distribution and processes of As release by investigating the salient groundwater chemistry and subsurface sedimentological characteristics. Besides collection of groundwater samples from domestic and public water supply wells, sediment samples from boreholes were investigated for textural and colour linkages. New hydrological insights for the region: Arsenic concentrations above the WHO guideline value of 10. μg/L were present in 33 wells and above the previous Indian national drinking standard of 50. μg/L were present in 15 wells. The green-olive colour sediments were more likely to yield As-enriched groundwater. The supersaturation of groundwater with respect to Fe(II) minerals, such as siderite and vivianite, explained the poor correlation between dissolved As and Fe. The result reinforced the phenomenon of reductive dissolution of Fe(III) oxyhydroxides releasing As to groundwater. This study throws light on the processes and mechanisms involved with As release in groundwater. The homogenous floodplain terrain makes the hydrological As imprint unambiguous and the hydrogeological signatures untarnished. Considering the absence of anthropogenic sources in the study area, the conclusions on the nature and causes for As release to groundwater looked dependable although the final contamination at specific subsurface sites would be influenced by advection-dispersion of groundwater flow accompanied by retardation, ion exchange, surface complexation and possible biodegradation.
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| 5. |
- Novikova, P. Y., et al.
(author)
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Sequencing of the genus Arabidopsis identifies a complex history of nonbifurcating speciation and abundant trans-specific polymorphism
- 2016
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In: Nature Genetics. - : Springer Science and Business Media LLC. - 1061-4036 .- 1546-1718. ; 48:9, s. 1077-1082
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Journal article (peer-reviewed)abstract
- The notion of species as reproductively isolated units related through a bifurcating tree implies that gene trees should generally agree with the species tree and that sister taxa should not share polymorphisms unless they diverged recently and should be equally closely related to outgroups. It is now possible to evaluate this model systematically. We sequenced multiple individuals from 27 described taxa representing the entire Arabidopsis genus. Cluster analysis identified seven groups, corresponding to described species that capture the structure of the genus. However, at the level of gene trees, only the separation of Arabidopsis thaliana from the remaining species was universally supported, and, overall, the amount of shared polymorphism demonstrated that reproductive isolation was considerably more recent than the estimated divergence times. We uncovered multiple cases of past gene flow that contradict a bifurcating species tree. Finally, we showed that the pattern of divergence differs between gene ontologies, suggesting a role for selection. © 2016 Nature America, Inc. All rights reserved.
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