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Objective comparison of particle tracking methods

Chenouard, Nicolas (author)
Smal, Ihor (author)
de Chaumont, Fabrice (author)
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Maska, Martin (author)
Sbalzarini, Ivo F. (author)
Gong, Yuanhao (author)
Cardinale, Janick (author)
Carthel, Craig (author)
Coraluppi, Stefano (author)
Winter, Mark (author)
Cohen, Andrew R. (author)
Godinez, William J. (author)
Rohr, Karl (author)
Kalaidzidis, Yannis (author)
Liang, Liang (author)
Duncan, James (author)
Shen, Hongying (author)
Xu, Yingke (author)
Magnusson, Klas E. G. (author)
KTH,Signalbehandling,ACCESS Linnaeus Centre
Jaldén, Joakim (author)
KTH,Signalbehandling,ACCESS Linnaeus Centre
Blau, Helen M. (author)
Paul-Gilloteaux, Perrine (author)
Roudot, Philippe (author)
Kervrann, Charles (author)
Waharte, Francois (author)
Tinevez, Jean-Yves (author)
Shorte, Spencer L. (author)
Willemse, Joost (author)
Celler, Katherine (author)
van Wezel, Gilles P. (author)
Dan, Han-Wei (author)
Tsai, Yuh-Show (author)
Ortiz de Solorzano, Carlos (author)
Olivo-Marin, Jean-Christophe (author)
Meijering, Erik (author)
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 (creator_code:org_t)
2014-01-19
2014
English.
In: Nature Methods. - : Springer Science and Business Media LLC. - 1548-7091 .- 1548-7105. ; 11:3, s. 281-U247
  • Journal article (peer-reviewed)
Abstract Subject headings
Close  
  • Particle tracking is of key importance for quantitative analysis of intracellular dynamic processes from time-lapse microscopy image data. Because manually detecting and following large numbers of individual particles is not feasible, automated computational methods have been developed for these tasks by many groups. Aiming to perform an objective comparison of methods, we gathered the community and organized an open competition in which participating teams applied their own methods independently to a commonly defined data set including diverse scenarios. Performance was assessed using commonly defined measures. Although no single method performed best across all scenarios, the results revealed clear differences between the various approaches, leading to notable practical conclusions for users and developers.

Subject headings

NATURVETENSKAP  -- Biologi -- Biokemi och molekylärbiologi (hsv//swe)
NATURAL SCIENCES  -- Biological Sciences -- Biochemistry and Molecular Biology (hsv//eng)

Keyword

Atomic-Force Microscopy
Automated Tracking
Fluorescence Microscopy
Dynamic Properties
Video Microscopy
Living Cells
Images
Segmentation
Algorithms
Transport

Publication and Content Type

ref (subject category)
art (subject category)

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