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Predicting unintended effects of drugs based on off-target tissue effects

Kim, D. (author)
Lee, J. (author)
Lee, Sunjae (author)
KTH,Science for Life Laboratory, SciLifeLab,Department of Bio and Brain Engineering, Korea Advanced Institute of Science and Technology, South Korea
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Park, J. (author)
Lee, D. (author)
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 (creator_code:org_t)
Elsevier, 2016
2016
English.
In: Biochemical and Biophysical Research Communications - BBRC. - : Elsevier. - 0006-291X .- 1090-2104. ; 469:3, s. 399-404
  • Journal article (peer-reviewed)
Abstract Subject headings
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  • Unintended effects of drugs can be caused by various mechanisms. Conventional analysis of unintended effects has focused on the target proteins of drugs. However, an interaction with off-target tissues of a drug might be one of the unintended effect-related mechanisms. We propose two processes to predict a drug’s unintended effects by off-target tissue effects: 1) identification of a drug’s off-target tissue and; 2) tissue protein - symptom relation identification (tissue protein - symptom matrix). Using this method, we predicted that 1,177 (10.7%) side-effects were related to off-target tissue effects in 11,041 known side-effects. Off-target tissues and unintended effects of successful repositioning drugs were also predicted. The effectiveness of relations of the proposed tissue protein - symptom matrix were evaluated by using the literature mining method. We predicted unintended effects of drugs as well as those effect-related off-target tissues. By using our prediction, we are able to reduce drug side-effects on off-target tissues and provide a chance to identify new indications of drugs of interest.

Subject headings

MEDICIN OCH HÄLSOVETENSKAP  -- Medicinska och farmaceutiska grundvetenskaper -- Farmaceutiska vetenskaper (hsv//swe)
MEDICAL AND HEALTH SCIENCES  -- Basic Medicine -- Pharmaceutical Sciences (hsv//eng)

Keyword

Unintended effect
Off-target tissue effect
Tissue protein-symptom matrix
Side-effect prediction
Drug repositioning

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By the author/editor
Kim, D.
Lee, J.
Lee, Sunjae
Park, J.
Lee, D.
About the subject
MEDICAL AND HEALTH SCIENCES
MEDICAL AND HEAL ...
and Basic Medicine
and Pharmaceutical S ...
Articles in the publication
Biochemical and ...
By the university
Royal Institute of Technology

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