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Integrated analysis...
Integrated analysis of transcript, protein and metabolite data to study lignin biosynthesis in hybrid aspen
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- Bylesjö, Max (author)
- Umeå universitet,Kemiska institutionen
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- Nilsson, Robert (author)
- Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Umeå universitet,Umeå Life Science Centre (ULSC),Institutionen för skoglig genetik och växtfysiologi,Department of Forest Genetics and Plant Physiology
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- Srivastava, Vaibhav (author)
- Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Institutionen för skoglig genetik och växtfysiologi,Department of Forest Genetics and Plant Physiology
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- Grönlund, Andreas, 1974- (author)
- Umeå universitet,Institutionen för fysiologisk botanik,Umeå Plant Science Centre (UPSC)
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- Johansson, Annika (author)
- Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Institutionen för skoglig genetik och växtfysiologi,Department of Forest Genetics and Plant Physiology
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- Jansson, Stefan, 1959- (author)
- Umeå universitet,Institutionen för fysiologisk botanik,Umeå Plant Science Centre (UPSC)
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- Karlsson, Jan, 1966- (author)
- Umeå universitet,Institutionen för fysiologisk botanik,Umeå Plant Science Centre (UPSC)
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- Moritz, Thomas (author)
- Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Umeå universitet,Umeå Plant Science Centre (UPSC),Institutionen för skoglig genetik och växtfysiologi,Department of Forest Genetics and Plant Physiology
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- Wingsle, Gunnar (author)
- Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Umeå universitet,Umeå Plant Science Centre (UPSC),Institutionen för skoglig genetik och växtfysiologi,Department of Forest Genetics and Plant Physiology
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- Trygg, Johan (author)
- Umeå universitet,Kemiska institutionen,Computational Life Science Cluster (CLiC)
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(creator_code:org_t)
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- 2008-12-03
- 2009
- English.
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In: Journal of Proteome Research. - : American Chemical Society (ACS). - 1535-3893 .- 1535-3907. ; 8:1, s. 199-210
- Related links:
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https://doi.org/10.1...
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Abstract
Subject headings
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- Tree biotechnology will soon reach a mature state where it will influence the overall supply of fiber, energy and wood products. We are now ready to make the transition from identifying candidate genes, controlling important biological processes, to discovering the detailed molecular function of these genes on a broader, more holistic, systems biology level. In this paper, a strategy is outlined for informative data generation and integrated modeling of systematic changes in transcript, protein and metabolite profiles measured from hybrid aspen samples. The aim is to study characteristics of common changes in relation to genotype-specific perturbations affecting the lignin biosynthesis and growth. We show that a considerable part of the systematic effects in the system can be tracked across all platforms and that the approach has a high potential value in functional characterization of candidate genes.
Subject headings
- NATURVETENSKAP -- Biologi -- Bioinformatik och systembiologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Bioinformatics and Systems Biology (hsv//eng)
- LANTBRUKSVETENSKAPER -- Lantbruksvetenskap, skogsbruk och fiske -- Skogsvetenskap (hsv//swe)
- AGRICULTURAL SCIENCES -- Agriculture, Forestry and Fisheries -- Forest Science (hsv//eng)
Keyword
- Combined profiling
- O2PLS
- Chemometrics
- Populus
- Lignin biosynthesis
Publication and Content Type
- ref (subject category)
- art (subject category)
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To the university's database
- By the author/editor
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Bylesjö, Max
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Nilsson, Robert
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Srivastava, Vaib ...
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Grönlund, Andrea ...
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Johansson, Annik ...
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Jansson, Stefan, ...
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show more...
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Karlsson, Jan, 1 ...
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Moritz, Thomas
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Wingsle, Gunnar
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Trygg, Johan
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- About the subject
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
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and Bioinformatics a ...
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- AGRICULTURAL SCIENCES
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AGRICULTURAL SCI ...
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and Agriculture Fore ...
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and Forest Science
- Articles in the publication
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Journal of Prote ...
- By the university
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Royal Institute of Technology
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Luleå University of Technology
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Umeå University
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Swedish University of Agricultural Sciences