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Using the wild bootstrap to quantify uncertainty in mean apparent propagator MRI

Gu, Xuan, 1988- (author)
Linköpings universitet,Avdelningen för medicinsk teknik,Tekniska fakulteten,Centrum för medicinsk bildvetenskap och visualisering, CMIV
Eklund, Anders, 1981- (author)
Linköpings universitet,Avdelningen för medicinsk teknik,Statistik och maskininlärning,Tekniska fakulteten,Centrum för medicinsk bildvetenskap och visualisering, CMIV
Özarslan, Evren, 1976- (author)
Linköpings universitet,Avdelningen för medicinsk teknik,Tekniska fakulteten,Centrum för medicinsk bildvetenskap och visualisering, CMIV
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Knutsson, Hans, 1950- (author)
Linköpings universitet,Avdelningen för medicinsk teknik,Tekniska fakulteten,Centrum för medicinsk bildvetenskap och visualisering, CMIV
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 (creator_code:org_t)
2019-06-12
2019
English.
In: Frontiers in Neuroinformatics. - : Frontiers Media S.A.. - 1662-5196. ; 13
  • Journal article (peer-reviewed)
Abstract Subject headings
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  • Purpose: Estimation of uncertainty of MAP-MRI metricsis an important topic, for several reasons. Bootstrap deriveduncertainty, such as the standard deviation, providesvaluable information, and can be incorporated in MAP-MRIstudies to provide more extensive insight.Methods: In this paper, the uncertainty of different MAPMRImetrics was quantified by estimating the empirical distributionsusing the wild bootstrap. We applied the wildbootstrap to both phantom data and human brain data, andobtain empirical distributions for theMAP-MRImetrics returnto-origin probability (RTOP), non-Gaussianity (NG) and propagatoranisotropy (PA).Results: We demonstrated the impact of diffusion acquisitionscheme (number of shells and number of measurementsper shell) on the uncertainty of MAP-MRI metrics.We demonstrated how the uncertainty of these metrics canbe used to improve group analyses, and to compare differentpreprocessing pipelines. We demonstrated that withuncertainty considered, the results for a group analysis canbe different.Conclusion: Bootstrap derived uncertain measures provideadditional information to the MAP-MRI derived metrics, andshould be incorporated in ongoing and future MAP-MRIstudies to provide more extensive insight.

Subject headings

TEKNIK OCH TEKNOLOGIER  -- Medicinteknik (hsv//swe)
ENGINEERING AND TECHNOLOGY  -- Medical Engineering (hsv//eng)

Keyword

Bootstrap
diffusion MRI
MAP-MRI
uncertainty
RtoP
NG
PA

Publication and Content Type

ref (subject category)
art (subject category)

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Gu, Xuan, 1988-
Eklund, Anders, ...
Özarslan, Evren, ...
Knutsson, Hans, ...
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ENGINEERING AND TECHNOLOGY
ENGINEERING AND ...
and Medical Engineer ...
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Frontiers in Neu ...
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Linköping University

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