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Pre-extinction Demo...
Pre-extinction Demographic Stability and Genomic Signatures of Adaptation in the Woolly Rhinoceros
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- Lord, Edana (author)
- Stockholms universitet,Naturhistoriska riksmuseet,Enheten för bioinformatik och genetik,Zoologiska institutionen,Centre for Palaeogenetics, Sweden; Swedish Museum of Natural History, Sweden,Ctr Palaeogenet, Svante Arrhenius Vag 20C, S-10691 Stockholm, Sweden.;Swedish Museum Nat Hist, Dept Bioinformat & Genet, Box 50007, S-10405 Stockholm, Sweden.;Stockholm Univ, Dept Zool, S-10691 Stockholm, Sweden.
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- Dussex, Nicolas (author)
- Stockholms universitet,Naturhistoriska riksmuseet,Enheten för bioinformatik och genetik,Zoologiska institutionen,Centre for Palaeogenetics, Sweden; Swedish Museum of Natural History, Sweden,Ctr Palaeogenet, Svante Arrhenius Vag 20C, S-10691 Stockholm, Sweden.;Swedish Museum Nat Hist, Dept Bioinformat & Genet, Box 50007, S-10405 Stockholm, Sweden.;Stockholm Univ, Dept Zool, S-10691 Stockholm, Sweden.
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- Kierczak, Marcin, 1981- (author)
- Uppsala universitet,Science for Life Laboratory, SciLifeLab,Molekylär evolution
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- Diez-del-Molino, David (author)
- Stockholms universitet,Naturhistoriska riksmuseet,Enheten för bioinformatik och genetik,Zoologiska institutionen,Centre for Palaeogenetics, Sweden,Ctr Palaeogenet, Svante Arrhenius Vag 20C, S-10691 Stockholm, Sweden.;Stockholm Univ, Dept Zool, S-10691 Stockholm, Sweden.
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- Ryder, Oliver A. (author)
- San Diego Zoo Inst Conservat Res, 15600 San Pasqual Valley Rd, Escondido, CA 92027 USA.
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- Stanton, David W. G. (author)
- Naturhistoriska riksmuseet,Enheten för bioinformatik och genetik,Ctr Palaeogenet, Svante Arrhenius Vag 20C, S-10691 Stockholm, Sweden.;Swedish Museum Nat Hist, Dept Bioinformat & Genet, Box 50007, S-10405 Stockholm, Sweden.
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- Gilbert, M. Thomas P. (author)
- Univ Copenhagen, GLOBE Inst, Oster Farimagsgade 5A, DK-1352 Copenhagen, Denmark.;Norwegian Univ Sci & Technol, Univ Museum, N-7491 Trondheim, Norway.,Acad Sci Sakha Yakutia, Yakutsk, Russia.
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- Sanchez-Barreiro, Fatima (author)
- Univ Copenhagen, GLOBE Inst, Oster Farimagsgade 5A, DK-1352 Copenhagen, Denmark.
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- Zhang, Guojie (author)
- Univ Copenhagen, Sect Ecol & Evolut, Dept Biol, DK-2100 Copenhagen, Denmark.;Chinese Acad Sci, Kunming Inst Zool, State Key Lab Genet Resources & Evolut, Kunming 650223, Yunnan, Peoples R China.;Chinese Acad Sci, Ctr Excellence Anim Evolut & Genet, Kunming 650223, Yunnan, Peoples R China.;BGI Shenzhen, Shenzhen 518083, Peoples R China.
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- Sinding, Mikkel-Holger S. (author)
- Univ Copenhagen, GLOBE Inst, Oster Farimagsgade 5A, DK-1352 Copenhagen, Denmark.;Trinity Coll Dublin, Smurfit Inst Genet, Dublin, Ireland.
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- Lorenzen, Eline D. (author)
- Univ Copenhagen, GLOBE Inst, Oster Farimagsgade 5A, DK-1352 Copenhagen, Denmark.
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- Willerslev, Eske (author)
- Univ Copenhagen, GLOBE Inst, Oster Farimagsgade 5A, DK-1352 Copenhagen, Denmark.
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Protopopov, Albert (author)
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- Shidlovskiy, Fedor (author)
- Natl Alliance Shidlovskiy Ice Age, Ice Age Museum, Moscow, Russia.
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- Fedorov, Sergey (author)
- North Eastern Fed Univ, Mammoth Museum, Yakutsk, Russia.
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- Bocherens, Herve (author)
- Senckenberg Ctr Human Evolut & Palaeoenvironm S H, Sigwartstr 10, D-72076 Tubingen, Germany.;Univ Tubingen, Dept Geosci, Biogeol, Holderlinstr 12, D-72074 Tubingen, Germany.
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- Nathan, Senthilvel K. S. S. (author)
- Sabah Wildlife Dept, Kota Kinabalu 88100, Sabah, Malaysia.
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- Goossens, Benoit (author)
- Sabah Wildlife Dept, Kota Kinabalu 88100, Sabah, Malaysia.;Cardiff Sch Biosci, Organisms & Environm Div, 33 Pk Pl, Cardiff CF10 3BA, Wales.;Cardiff Univ, Sustainable Places Res Inst, 33 Pk Pl, Cardiff CF10 3BA, Wales.;Danau Girang Field Ctr, Sabah Wildlife Dept, Kota Kinabalu 88100, Sabah, Malaysia.
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- van der Plicht, Johannes (author)
- Univ Groningen, Ctr Isotope Res, Groningen, Netherlands.
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- Chan, Yvonne L. (author)
- Stockholms universitet,Naturhistoriska riksmuseet,Enheten för bioinformatik och genetik,Zoologiska institutionen,Centre for Palaeogenetics, Sweden; Swedish Museum of Natural History, Sweden,Ctr Palaeogenet, Svante Arrhenius Vag 20C, S-10691 Stockholm, Sweden.;Swedish Museum Nat Hist, Dept Bioinformat & Genet, Box 50007, S-10405 Stockholm, Sweden.;Stockholm Univ, Dept Zool, S-10691 Stockholm, Sweden.
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- Prost, Stefan (author)
- Naturhistoriska riksmuseet,Enheten för bioinformatik och genetik,Senckenberg Museum, LOEWE Ctr Translat Biodivers Genom, Frankfurt, Germany.;Natl Zool Garden, South African Natl Biodivers Inst, Pretoria, South Africa.
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- Potapova, Olga (author)
- Acad Sci Sakha Yakutia, Yakutsk, Russia.;Pleistocene Pk Fdn, Philadelphia, PA 19006 USA.;Mammoth Site Hot Springs SD Inc, Hot Springs, SD 57747 USA.
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- Kirillova, Irina (author)
- Natl Alliance Shidlovskiy Ice Age, Ice Age Museum, Moscow, Russia.
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- Lister, Adrian M. (author)
- Nat Hist Museum, Dept Earth Sci, London SW7 5BD, England.
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- Heintzman, Peter D. (author)
- UiT Arctic Univ Norway, Arctic Univ Museum Norway, N-9037 Tromso, Norway.
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- Kapp, Joshua D. (author)
- Univ Calif Santa Cruz, Dept Ecol & Evolutionary Biol, Santa Cruz, CA 95064 USA.
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- Shapiro, Beth (author)
- Univ Calif Santa Cruz, Dept Ecol & Evolutionary Biol, Santa Cruz, CA 95064 USA.;Univ Calif Santa Cruz, Howard Hughes Med Inst, Santa Cruz, CA 96050 USA.
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- Vartanyan, Sergey (author)
- RAS, NA Shilo North East Interdisciplinary Sci Res Ins, Far East Branch, NEISRI,FEB, Magadan 685000, Russia.
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- Götherström, Anders (author)
- Stockholms universitet,Institutionen för arkeologi och antikens kultur,Centre for Palaeogenetics, Sweden,Ctr Palaeogenet, Svante Arrhenius Vag 20C, S-10691 Stockholm, Sweden.;Stockholm Univ, Dept Archaeol & Class Studies, Archaeol Res Lab, S-10691 Stockholm, Sweden.
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- Dalen, Love (author)
- Stockholms universitet,Naturhistoriska riksmuseet,Enheten för bioinformatik och genetik,Zoologiska institutionen,Centre for Palaeogenetics, Sweden; Swedish Museum of Natural History, Sweden,Ctr Palaeogenet, Svante Arrhenius Vag 20C, S-10691 Stockholm, Sweden.;Swedish Museum Nat Hist, Dept Bioinformat & Genet, Box 50007, S-10405 Stockholm, Sweden.;Stockholm Univ, Dept Zool, S-10691 Stockholm, Sweden.
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(creator_code:org_t)
- Elsevier BV, 2020
- 2020
- English.
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In: Current Biology. - : Elsevier BV. - 0960-9822 .- 1879-0445. ; 30:19
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Abstract
Subject headings
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- Ancient DNA has significantly improved our understanding of the evolution and population history of extinct megafauna. However, few studies have used complete ancient genomes to examine species responses to climate change prior to extinction. The woolly rhinoceros (Coelodonta antiquitatis) was a cold-adapted megaherbivore widely distributed across northern Eurasia during the Late Pleistocene and became extinct approximately 14 thousand years before present (ka BP). While humans and climate change have been proposed as potential causes of extinction [1-3], knowledge is limited on how the woolly rhinoceros was impacted by human arrival and climatic fluctuations [2]. Here, we use one complete nuclear genome and 14 mitogenomes to investigate the demographic history of woolly rhinoceros leading up to its extinction. Unlike other northern megafauna, the effective population size of woolly rhinoceros likely increased at 29.7 ka BP and subsequently remained stable until close to the species’ extinction. Analysis of the nuclear genome from a similar to 18.5-ka-old specimen did not indicate any increased inbreeding or reduced genetic diversity, suggesting that the population size remained steady for more than 13 ka following the arrival of humans [4]. The population contraction leading to extinction of the woolly rhinoceros may have thus been sudden and mostly driven by rapid warming in the Bolling-Allerod interstadial. Furthermore, we identify woolly rhinoceros-specific adaptations to arctic climate, similar to those of the woolly mammoth. This study highlights how species respond differently to climatic fluctuations and further illustrates the potential of palaeogenomics to study the evolutionary history of extinct species.
Subject headings
- NATURVETENSKAP -- Biologi -- Evolutionsbiologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Evolutionary Biology (hsv//eng)
- NATURVETENSKAP -- Biologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences (hsv//eng)
Keyword
- Diversity of life
- Livets mångfald
Publication and Content Type
- ref (subject category)
- art (subject category)
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- By the author/editor
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Lord, Edana
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Dussex, Nicolas
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Kierczak, Marcin ...
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Diez-del-Molino, ...
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Ryder, Oliver A.
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Stanton, David W ...
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show more...
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Gilbert, M. Thom ...
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Sanchez-Barreiro ...
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Zhang, Guojie
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Sinding, Mikkel- ...
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Lorenzen, Eline ...
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Willerslev, Eske
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Protopopov, Albe ...
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Shidlovskiy, Fed ...
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Fedorov, Sergey
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Bocherens, Herve
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Nathan, Senthilv ...
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Goossens, Benoit
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van der Plicht, ...
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Chan, Yvonne L.
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Prost, Stefan
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Potapova, Olga
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Kirillova, Irina
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Lister, Adrian M ...
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Heintzman, Peter ...
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Kapp, Joshua D.
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Shapiro, Beth
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Vartanyan, Serge ...
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Götherström, And ...
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Dalen, Love
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- About the subject
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
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and Evolutionary Bio ...
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
- Articles in the publication
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Current Biology
- By the university
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Swedish Museum of Natural History
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Stockholm University
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Uppsala University