High-Quality Genome Assemblies of 4 Members of the Podospora anserina Species Complex

Ament-Velásquez, Sandra Lorena,Ph.D.1988-Stockholms universitet,Avdelningen för populationsgenetik,Stockholm Univ, Dept Zool, Div Populat Genet, S-10691 Stockholm, Sweden. (author)

The filamentous fungus Podospora anserina is a model organism used extensively in the study of molecular biology, senescence, prion biology, meiotic drive, mating-type chromosome evolution, and plant biomass degradation. It has recently been established that P. anserina is a member of a complex of 7 closely related species. In addition to P. anserina, high-quality genomic resources are available for 2 of these taxa. Here, we provide chromosome-level annotated assemblies of the 4 remaining species of the complex, as well as a comprehensive data set of annotated assemblies from a total of 28 Podospora genomes. We find that all 7 species have genomes of around 35 Mb arranged in 7 chromosomes that are mostly collinear and less than 2% divergent from each other at genic regions. We further attempt to resolve their phylogenetic relationships, finding significant levels of phylogenetic conflict as expected from a rapid and recent diversification.

Vogan, Aaron A.Uppsala universitet,Systematisk biologi(Swepub:uu)aarvo811 (author)
Wallerman, OlaUppsala universitet,Institutionen för medicinsk biokemi och mikrobiologi(Swepub:uu)olwal516 (author)
Hartmann, Fanny E.Univ Paris Saclay, Ecol Systemat Evolut, CNRS, AgroParisTech, F-91198 Gif Sur Yvette, France. (author)
Gautier, ValerieUniv Paris Cite, Lab Interdisciplinaire Energies Demain LIED, F-75013 Paris, France. (author)
Silar, PhilippeUniv Paris Cite, Lab Interdisciplinaire Energies Demain LIED, F-75013 Paris, France. (author)
Giraud, TatianaUniv Paris Saclay, Ecol Systemat Evolut, CNRS, AgroParisTech, F-91198 Gif Sur Yvette, France. (author)
Johannesson, Hanna,1970-Uppsala universitet,Stockholms universitet,Institutionen för ekologi, miljö och botanik,Systematisk biologi,Royal Swedish Acad Sci, S-11418 Stockholm, Sweden.;Stockholm Univ, Dept Ecol Environm & Plant Sci, S-10691 Stockholm, Sweden.(Swepub:uu)hajoh452 (author)
Stockholms universitetAvdelningen för populationsgenetik (creator_code:org_t)

By the author/editor: Ament-Velásquez, ...; Vogan, Aaron A.; Wallerman, Ola; Hartmann, Fanny ...; Gautier, Valerie; Silar, Philippe; show more...; Giraud, Tatiana; Johannesson, Han ...; show less...

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NATURAL SCIENCES: NATURAL SCIENCES; and Biological Scien ...; and Biochemistry and ...

NATURAL SCIENCES: NATURAL SCIENCES; and Biological Scien ...; and Evolutionary Bio ...

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