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PfamAlyzer : domain-centric homology search

Hollich, Volker (author)
Sonnhammer, Erik L. L. (author)
Stockholms universitet,Institutionen för biokemi och biofysik
 (creator_code:org_t)
2007-10-31
2007
English.
In: Bioinformatics. - : Oxford University Press (OUP). - 1367-4803 .- 1367-4811 .- 1460-2059. ; 23:24, s. 3382-3383
  • Journal article (peer-reviewed)
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  • PfamAlyzer is a Java applet that enables exploration of Pfam domain architectures using a user-friendly graphical interface. It can search the UniProt protein database for a domain pattern. Domain patterns similar to the query are presented graphically by PfamAlyzer either in a ranked list or pinned to the tree of life. Such domain-centric homology search can assist identification of distant homologs with shared domain architecture.

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