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When Texture Matters : Texture-Focused Cnns Outperform General Data Augmentation and Pretraining in Oral Cancer Detection

Wetzer, Elisabeth (author)
Uppsala universitet,Avdelningen för visuell information och interaktion,Bildanalys och människa-datorinteraktion,Centre for image analysis
Gay, Jo (author)
Uppsala universitet,Institutionen för informationsteknologi,Centre for image analysis
Harlin, Hugo (author)
Umeå universitet,Institutionen för ekologi, miljö och geovetenskap,Umeå Univ, Dept Ecol & Environm Sci, Umeå, Sweden
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Lindblad, Joakim (author)
Uppsala universitet,Avdelningen för visuell information och interaktion,Bildanalys och människa-datorinteraktion,Centre for image analysis
Sladoje, Natasa (author)
Uppsala universitet,Avdelningen för visuell information och interaktion,Bildanalys och människa-datorinteraktion,Centre for image analysis
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 (creator_code:org_t)
IEEE, 2020
2020
English.
In: 2020 IEEE 17th International Symposium on Biomedical Imaging (ISBI 2020). - : IEEE. - 9781538693308 - 9781538693315 ; , s. 517-521
  • Conference paper (peer-reviewed)
Abstract Subject headings
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  • Early detection is essential to reduce cancer mortality. Oral cancer could be subject to screening programs (similar as for cervical cancer) by collecting Pap smear samples at any dentist visit. However, manual analysis of the resulting massive amount of data is prohibitively costly. Convolutional neural networks (CNNs) have shown promising results in discriminating between cancerous and non-cancerous cells, which enables efficient automated processing of cancer screening data. We investigate different CNN architectures which explicitly aim to utilize texture information, for cytological cancer classification, motivated by studies showing that chromatin texture is among the most important discriminative features for that purpose. Results show that CNN classifiers inspired by Local Binary Patterns (LBPs) achieve better performance than general purpose CNNs. This holds also when different levels of general data augmentation, as well as pre-training, are considered.

Subject headings

TEKNIK OCH TEKNOLOGIER  -- Medicinteknik -- Medicinsk bildbehandling (hsv//swe)
ENGINEERING AND TECHNOLOGY  -- Medical Engineering -- Medical Image Processing (hsv//eng)

Keyword

Texture Analysis
Cancer Detection
CNN
Brightfield Microscopy
Local Binary Patterns

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