Search: onr:"swepub:oai:DiVA.org:uu-144132" > Genome Sequence of ...
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000 | 11690naa a2203013 4500 | |
001 | oai:DiVA.org:uu-144132 | |
003 | SwePub | |
008 | 110127s2010 | |||||||||||000 ||eng| | |
024 | 7 | a https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-1441322 URI |
024 | 7 | a https://doi.org/10.1371/journal.pbio.10003132 DOI |
040 | a (SwePub)uu | |
041 | a engb eng | |
042 | 9 SwePub | |
072 | 7 | a ref2 swepub-contenttype |
072 | 7 | a art2 swepub-publicationtype |
100 | 1 | a Richards, Stephen4 aut |
245 | 1 0 | a Genome Sequence of the Pea Aphid Acyrthosiphon pisum |
264 | c 2010-02-23 | |
264 | 1 | b Public Library of Science (PLoS),c 2010 |
338 | a electronic2 rdacarrier | |
520 | a Aphids are important agricultural pests and also biological models for studies of insect-plant interactions, symbiosis, virus vectoring, and the developmental causes of extreme phenotypic plasticity. Here we present the 464 Mb draft genome assembly of the pea aphid Acyrthosiphon pisum. This first published whole genome sequence of a basal hemimetabolous insect provides an outgroup to the multiple published genomes of holometabolous insects. Pea aphids are host-plant specialists, they can reproduce both sexually and asexually, and they have coevolved with an obligate bacterial symbiont. Here we highlight findings from whole genome analysis that may be related to these unusual biological features. These findings include discovery of extensive gene duplication in more than 2000 gene families as well as loss of evolutionarily conserved genes. Gene family expansions relative to other published genomes include genes involved in chromatin modification, miRNA synthesis, and sugar transport. Gene losses include genes central to the IMD immune pathway, selenoprotein utilization, purine salvage, and the entire urea cycle. The pea aphid genome reveals that only a limited number of genes have been acquired from bacteria; thus the reduced gene count of Buchnera does not reflect gene transfer to the host genome. The inventory of metabolic genes in the pea aphid genome suggests that there is extensive metabolite exchange between the aphid and Buchnera, including sharing of amino acid biosynthesis between the aphid and Buchnera. The pea aphid genome provides a foundation for post-genomic studies of fundamental biological questions and applied agricultural problems. | |
650 | 7 | a NATURVETENSKAPx Biologi0 (SwePub)1062 hsv//swe |
650 | 7 | a NATURAL SCIENCESx Biological Sciences0 (SwePub)1062 hsv//eng |
653 | a Biology | |
653 | a Biologi | |
700 | 1 | a Gibbs, Richard A.4 aut |
700 | 1 | a Gerardo, Nicole M.4 aut |
700 | 1 | a Moran, Nancy4 aut |
700 | 1 | a Nakabachi, Atsushi4 aut |
700 | 1 | a Stern, David4 aut |
700 | 1 | a Tagu, Denis4 aut |
700 | 1 | a Wilson, Alex C. C.4 aut |
700 | 1 | a Muzny, Donna4 aut |
700 | 1 | a Kovar, Christie4 aut |
700 | 1 | a Cree, Andy4 aut |
700 | 1 | a Chacko, Joseph4 aut |
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700 | 1 | a Dinh, Huyen H.4 aut |
700 | 1 | a Gabisi, Ramatu Ayiesha4 aut |
700 | 1 | a Hines, Sandra4 aut |
700 | 1 | a Hume, Jennifer4 aut |
700 | 1 | a Jhangian, Shalini N.4 aut |
700 | 1 | a Joshi, Vandita4 aut |
700 | 1 | a Lewis, Lora R.4 aut |
700 | 1 | a Liu, Yih-shin4 aut |
700 | 1 | a Lopez, John4 aut |
700 | 1 | a Morgan, Margaret B.4 aut |
700 | 1 | a Nguyen, Ngoc Bich4 aut |
700 | 1 | a Okwuonu, Geoffrey O.4 aut |
700 | 1 | a Ruiz, San Juana4 aut |
700 | 1 | a Santibanez, Jireh4 aut |
700 | 1 | a Wright, Rita A.4 aut |
700 | 1 | a Fowler, Gerald R.4 aut |
700 | 1 | a Hitchens, Matthew E.4 aut |
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700 | 1 | a Moen, Charles4 aut |
700 | 1 | a Steffen, David4 aut |
700 | 1 | a Warren, James T.4 aut |
700 | 1 | a Zhang, Jingkun4 aut |
700 | 1 | a Nazareth, Lynne V.4 aut |
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700 | 1 | a Davis, Clay4 aut |
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700 | 1 | a Pu, Ling-Ling4 aut |
700 | 1 | a Bell, Stephanie N.4 aut |
700 | 1 | a Johnson, Angela Jolivet4 aut |
700 | 1 | a Vattathil, Selina4 aut |
700 | 1 | a Williams, Rex L., Jr.4 aut |
700 | 1 | a Shigenobu, Shuji4 aut |
700 | 1 | a Dang, Phat M.4 aut |
700 | 1 | a Morioka, Mizue4 aut |
700 | 1 | a Fukatsu, Takema4 aut |
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700 | 1 | a Miyagishima, Shin-ya4 aut |
700 | 1 | a Jiang, Huaiyang4 aut |
700 | 1 | a Worley, Kim C.4 aut |
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700 | 1 | a Chen, Hsiu-Chuan4 aut |
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700 | 1 | a Hlavina, Wratko4 aut |
700 | 1 | a Kapustin, Yuri4 aut |
700 | 1 | a Kiryutin, Boris4 aut |
700 | 1 | a Kitts, Paul4 aut |
700 | 1 | a Maglott, Donna4 aut |
700 | 1 | a Murphy, Terence4 aut |
700 | 1 | a Pruitt, Kim4 aut |
700 | 1 | a Sapojnikov, Victor4 aut |
700 | 1 | a Souvorov, Alexandre4 aut |
700 | 1 | a Thibaud-Nissen, Francoise4 aut |
700 | 1 | a Camara, Francisco4 aut |
700 | 1 | a Guigo, Roderic4 aut |
700 | 1 | a Stanke, Mario4 aut |
700 | 1 | a Solovyev, Victor4 aut |
700 | 1 | a Kosarev, Peter4 aut |
700 | 1 | a Gilbert, Don4 aut |
700 | 1 | a Gabaldon, Toni4 aut |
700 | 1 | a Huerta-Cepas, Jaime4 aut |
700 | 1 | a Marcet-Houben, Marina4 aut |
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700 | 1 | a Moya, Andres4 aut |
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700 | 1 | a Llorens, Carlos4 aut |
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700 | 1 | a Hedges, Dale4 aut |
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700 | 1 | a Cass, Bodil4 aut |
700 | 1 | a Degnan, Patrick4 aut |
700 | 1 | a Hurwitz, Bonnie4 aut |
700 | 1 | a Leonardo, Teresa4 aut |
700 | 1 | a Koga, Ryuichi4 aut |
700 | 1 | a Altincicek, Boran4 aut |
700 | 1 | a Anselme, Caroline4 aut |
700 | 1 | a Atamian, Hagop4 aut |
700 | 1 | a Barribeau, Seth M.4 aut |
700 | 1 | a de Vos, Martin4 aut |
700 | 1 | a Duncan, Elizabeth J.4 aut |
700 | 1 | a Evans, Jay4 aut |
700 | 1 | a Ghanim, Murad4 aut |
700 | 1 | a Heddi, Abdelaziz4 aut |
700 | 1 | a Kaloshian, Isgouhi4 aut |
700 | 1 | a Vincent-Monegat, Carole4 aut |
700 | 1 | a Parker, Ben J.4 aut |
700 | 1 | a Perez-Brocal, Vicente4 aut |
700 | 1 | a Rahbe, Yvan4 aut |
700 | 1 | a Spragg, Chelsea J.4 aut |
700 | 1 | a Tamames, Javier4 aut |
700 | 1 | a Tamarit, Danielu Uppsala universitet,Molekylär evolution4 aut0 (Swepub:uu)danta608 |
700 | 1 | a Tamborindeguy, Cecilia4 aut |
700 | 1 | a Vilcinskas, Andreas4 aut |
700 | 1 | a Bickel, Ryan D.4 aut |
700 | 1 | a Brisson, Jennifer A.4 aut |
700 | 1 | a Butts, Thomas4 aut |
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700 | 1 | a Christiaens, Olivier4 aut |
700 | 1 | a Davis, Gregory K.4 aut |
700 | 1 | a Duncan, Elizabeth4 aut |
700 | 1 | a Ferrier, David4 aut |
700 | 1 | a Iga, Masatoshi4 aut |
700 | 1 | a Janssen, Ralfu Uppsala universitet,Paleobiologi4 aut0 (Swepub:uu)ralja876 |
700 | 1 | a Lu, Hsiao-Ling4 aut |
700 | 1 | a McGregor, Alistair4 aut |
700 | 1 | a Miura, Toru4 aut |
700 | 1 | a Smagghe, Guy4 aut |
700 | 1 | a Smith, James4 aut |
700 | 1 | a van der Zee, Maurijn4 aut |
700 | 1 | a Velarde, Rodrigo4 aut |
700 | 1 | a Wilson, Megan4 aut |
700 | 1 | a Dearden, Peter4 aut |
700 | 1 | a Edwards, Owain R.4 aut |
700 | 1 | a Gordon, Karl4 aut |
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700 | 1 | a Srinivasan, Dayalan4 aut |
700 | 1 | a Walsh, Thomas K.4 aut |
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700 | 1 | a Jaubert-Possamai, Stephanie4 aut |
700 | 1 | a Fenton, Brian4 aut |
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700 | 1 | a Rizk, Guillaume4 aut |
700 | 1 | a Lavenier, Dominique4 aut |
700 | 1 | a Nicolas, Jacques4 aut |
700 | 1 | a Smadja, Carole4 aut |
700 | 1 | a Zhou, Jing-Jiang4 aut |
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700 | 1 | a Campbell, Peter4 aut |
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700 | 1 | a Reardon, Karen T.4 aut |
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700 | 1 | a Wilkinson, Thomas L.4 aut |
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700 | 1 | a Abdel-latief, Mohatmed4 aut |
700 | 1 | a Robichon, Alain4 aut |
700 | 1 | a Veenstra, Jan A.4 aut |
700 | 1 | a Hauser, Frank4 aut |
700 | 1 | a Cazzamali, Giuseppe4 aut |
700 | 1 | a Schneider, Martina4 aut |
700 | 1 | a Williamson, Michael4 aut |
700 | 1 | a Stafflinger, Elisabeth4 aut |
700 | 1 | a Hansen, Karina K.4 aut |
700 | 1 | a Grimmelikhuijzen, Cornelis J. P.4 aut |
700 | 1 | a Price, Daniel R. G.4 aut |
700 | 1 | a Caillaud, Marina4 aut |
700 | 1 | a van Fleet, Eric4 aut |
700 | 1 | a Ren, Qinghu4 aut |
700 | 1 | a Gatehouse, John A.4 aut |
700 | 1 | a Brault, Veronique4 aut |
700 | 1 | a Monsion, Baptiste4 aut |
700 | 1 | a Diaz, Jason4 aut |
700 | 1 | a Hunnicutt, Laura4 aut |
700 | 1 | a Ju, Ho-Jong4 aut |
700 | 1 | a Pechuan, Ximo4 aut |
700 | 1 | a Aguilar, Jose4 aut |
700 | 1 | a Cortes, Teresa4 aut |
700 | 1 | a Ortiz-Rivas, Benjamin4 aut |
700 | 1 | a Martinez-Torres, David4 aut |
700 | 1 | a Dombrovsky, Aviv4 aut |
700 | 1 | a Dale, Richard P.4 aut |
700 | 1 | a Davies, T. G. Emyr4 aut |
700 | 1 | a Williamson, Martin S.4 aut |
700 | 1 | a Jones, Andrew4 aut |
700 | 1 | a Sattelle, David4 aut |
700 | 1 | a Williamson, Sally4 aut |
700 | 1 | a Wolstenholme, Adrian4 aut |
700 | 1 | a Cottret, Ludovic4 aut |
700 | 1 | a Sagot, Marie France4 aut |
700 | 1 | a Heckel, David G.4 aut |
700 | 1 | a Hunter, Wayne4 aut |
710 | 2 | a Uppsala universitetb Molekylär evolution4 org |
773 | 0 | t PLoS biologyd : Public Library of Science (PLoS)g 8:2, s. e1000313-q 8:2<e1000313-x 1544-9173x 1545-7885 |
856 | 4 | u https://doi.org/10.1371/journal.pbio.1000313y Fulltext |
856 | 4 | u https://uu.diva-portal.org/smash/get/diva2:392632/FULLTEXT01.pdfx primaryx Raw objecty fulltext:print |
856 | 4 | u https://journals.plos.org/plosbiology/article/file?id=10.1371/journal.pbio.1000313&type=printable |
856 | 4 8 | u https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-144132 |
856 | 4 8 | u https://doi.org/10.1371/journal.pbio.1000313 |
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