Search: onr:"swepub:oai:DiVA.org:uu-422764" > Contributions of de...
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001 | oai:DiVA.org:uu-422764 | |
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008 | 201015s2021 | |||||||||||000 ||eng| | |
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024 | 7 | a https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-4227642 URI |
024 | 7 | a https://doi.org/10.1038/s41431-020-0698-52 DOI |
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041 | a engb eng | |
042 | 9 SwePub | |
072 | 7 | a ref2 swepub-contenttype |
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100 | 1 | a Carlsson Almlöf, Jonasu Uppsala University,Uppsala universitet,Molekylär medicin,Science for Life Laboratory, SciLifeLab,Uppsala Univ, Sweden4 aut0 (Swepub:uu)jonca820 |
245 | 1 0 | a Contributions of de novo variants to systemic lupus erythematosus |
264 | c 2020-07-28 | |
264 | 1 | b Springer Nature,c 2021 |
338 | a electronic2 rdacarrier | |
500 | a Funding Agencies|Knut and Alice Wallenberg FoundationKnut & Alice Wallenberg Foundation; Swedish Research Council for Medicine and Health [2018-02399, 2017-02000]; Swedish Rheumatism Association; King Gustaf Vs 80-year Foundation; Swedish Society of Medicine; Ingegerd Johansson donation | |
520 | a By performing whole-genome sequencing in a Swedish cohort of 71 parent-offspring trios, in which the child in each family is affected by systemic lupus erythematosus (SLE, OMIM 152700), we investigated the contribution of de novo variants to risk of SLE. We found de novo single nucleotide variants (SNVs) to be significantly enriched in gene promoters in SLE patients compared with healthy controls at a level corresponding to 26 de novo promoter SNVs more in each patient than expected. We identified 12 de novo SNVs in promoter regions of genes that have been previously implicated in SLE, or that have functions that could be of relevance to SLE. Furthermore, we detected three missense de novo SNVs, five de novo insertion-deletions, and three de novo structural variants with potential to affect the expression of genes that are relevant for SLE. Based on enrichment analysis, disease-affecting de novo SNVs are expected to occur in one-third of SLE patients. This study shows that de novo variants in promoters commonly contribute to the genetic risk of SLE. The fact that de novo SNVs in SLE were enriched to promoter regions highlights the importance of using whole-genome sequencing for identification of de novo variants. | |
650 | 7 | a MEDICIN OCH HÄLSOVETENSKAPx Klinisk medicinx Reumatologi och inflammation0 (SwePub)302102 hsv//swe |
650 | 7 | a MEDICAL AND HEALTH SCIENCESx Clinical Medicinex Rheumatology and Autoimmunity0 (SwePub)302102 hsv//eng |
650 | 7 | a MEDICIN OCH HÄLSOVETENSKAPx Medicinska och farmaceutiska grundvetenskaperx Medicinsk genetik0 (SwePub)301072 hsv//swe |
650 | 7 | a MEDICAL AND HEALTH SCIENCESx Basic Medicinex Medical Genetics0 (SwePub)301072 hsv//eng |
653 | a Medical Science | |
653 | a Medicinsk vetenskap | |
700 | 1 | a Nystedt, Sarau Uppsala University,Uppsala universitet,Molekylär medicin,Science for Life Laboratory, SciLifeLab,Uppsala Univ, Sweden4 aut0 (Swepub:uu)sarny218 |
700 | 1 | a Mechtidou, Aikateriniu Uppsala University,Uppsala Univ, Sweden4 aut |
700 | 1 | a Leonard, Dag,d 1975-u Uppsala University,Uppsala universitet,Reumatologi,Science for Life Laboratory, SciLifeLab,Uppsala Univ, Sweden4 aut0 (Swepub:uu)dagle338 |
700 | 1 | a Eloranta, Maija-Leenau Uppsala University,Uppsala universitet,Reumatologi,Science for Life Laboratory, SciLifeLab,Uppsala Univ, Sweden4 aut0 (Swepub:uu)maelo020 |
700 | 1 | a Grosso, Giorgiau Karolinska Institutet4 aut |
700 | 1 | a Sjöwall, Christopheru Linköpings universitet,Linköping University,Avdelningen för inflammation och infektion,Medicinska fakulteten,Region Östergötland, Reumatologiska kliniken i Östergötland4 aut0 (Swepub:liu)chrsj93 |
700 | 1 | a Bengtsson, Anders A.u Lund University,Lunds universitet,Reumatologi och molekylär skelettbiologi,Sektion III,Institutionen för kliniska vetenskaper, Lund,Medicinska fakulteten,Lund SLE Research Group,Forskargrupper vid Lunds universitet,Rheumatology,Section III,Department of Clinical Sciences, Lund,Faculty of Medicine,Lund University Research Groups,Lund Univ, Sweden4 aut0 (Swepub:lu)reum-abe |
700 | 1 | a Jönsen, Andreasu Lund University,Lunds universitet,Reumatologi och molekylär skelettbiologi,Sektion III,Institutionen för kliniska vetenskaper, Lund,Medicinska fakulteten,Lund SLE Research Group,Forskargrupper vid Lunds universitet,Rheumatology,Section III,Department of Clinical Sciences, Lund,Faculty of Medicine,Lund University Research Groups,Lund Univ, Sweden4 aut0 (Swepub:lu)reum-ajo |
700 | 1 | a Gunnarsson, Ivau Karolinska Institutet4 aut |
700 | 1 | a Svenungsson, Elisabetu Karolinska Institutet4 aut |
700 | 1 | a Rönnblom, Larsu Uppsala University,Uppsala universitet,Reumatologi,Science for Life Laboratory, SciLifeLab,Uppsala Univ, Sweden4 aut0 (Swepub:uu)larsronn |
700 | 1 | a Sandling, Johanna K.u Uppsala University,Uppsala universitet,Reumatologi,Molekylär medicin,Science for Life Laboratory, SciLifeLab,Uppsala Univ, Sweden4 aut0 (Swepub:uu)josan062 |
700 | 1 | a Syvänen, Ann-Christine,d 1950-u Uppsala University,Uppsala universitet,Molekylär medicin,Science for Life Laboratory, SciLifeLab,Uppsala Univ, Sweden4 aut0 (Swepub:uu)anncsyva |
710 | 2 | a Uppsala universitetb Molekylär medicin4 org |
773 | 0 | t European Journal of Human Geneticsd : Springer Natureg 29:1, s. 184-193q 29:1<184-193x 1018-4813x 1476-5438 |
856 | 4 | u https://doi.org/10.1038/s41431-020-0698-5y Fulltext |
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856 | 4 | u https://www.nature.com/articles/s41431-020-0698-5.pdf |
856 | 4 | u http://dx.doi.org/10.1038/s41431-020-0698-5x freey FULLTEXT |
856 | 4 | u https://liu.diva-portal.org/smash/get/diva2:1462167/FULLTEXT01.pdfx primaryx Raw objecty fulltext:print |
856 | 4 8 | u https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-422764 |
856 | 4 8 | u https://doi.org/10.1038/s41431-020-0698-5 |
856 | 4 8 | u https://lup.lub.lu.se/record/f9130b1b-bd0c-444d-a1da-785fb71fe0cb |
856 | 4 8 | u https://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-168540 |
856 | 4 8 | u http://kipublications.ki.se/Default.aspx?queryparsed=id:144364295 |
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