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A history of the Me...
A history of the MetaSUB consortium : Tracking urban microbes around the globe
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- Ryon, Krista A. (author)
- Weill Cornell Med, Dept Physiol & Biophys, New York, NY USA.,Weill Cornell Medical College
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- Tierney, Braden T. (author)
- Weill Cornell Med, Dept Physiol & Biophys, New York, NY USA.;Weill Cornell Med, New York, NY USA.,Weill Cornell Medical College
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- Frolova, Alina (author)
- NASU, Inst Mol Biol & Genet, Kiev, Ukraine.;Kyiv Acad Univ, Kiev, Ukraine.,Institute of Molecular Biology and Genetics
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- Kahles, Andre (author)
- Swiss Fed Inst Technol, Zurich, Switzerland.;Swiss Inst Bioinformat, Lausanne, Switzerland.,Swiss Institute for Bioinformatics (SIB),ETH Zürich
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- Desnues, Christelle (author)
- Mediterranean Inst Oceanog, 163 Ave Luminy Batiment Mediterranee, F-13288 Marseille 9, France.,Mediterranean Institute of Oceanography, Marseille
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- Ouzounis, Christos (author)
- Aristotle Univ Thessalon & CERTH, Thessaloniki, Greece.,Aristotle University of Thessaloniki
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- Gibas, Cynthis (author)
- Univ N Carolina, Charlotte, NC USA.,University of North Carolina at Charlotte
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- Bezdan, Daniela (author)
- Univ Tubingen, Inst Med & Appl Genom, Tubingen, Germany.;Univ Tibingen, Germany NGS Competence Tubingen NCCT, Tubingen, Germany.;Yuri GmbH, Meckenbeuren, Germany.,University of Tübingen
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- Deng, Youping (author)
- Univ Hawaii Manoa, John A Burns Sch Med, Dept Quantitat Hlth Sci, Honolulu, HI 96813 USA.
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- He, Ding (author)
- Univ Copenhagen, Copenhagen, Denmark.,University of Copenhagen
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- Dias-Neto, Emmanuel (author)
- AC Camargo Canc Ctr, Sao Paulo, Brazil.,A. C. Camargo Cancer Center
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- Elhaik, Eran (author)
- Lund University,Lunds universitet,Molekylär cellbiologi,Biologiska institutionen,Naturvetenskapliga fakulteten,Bioinformatik,Forskargrupper vid Lunds universitet,Molecular Cell Biology,Department of Biology,Faculty of Science,Bioinformatics,Lund University Research Groups,Weill Cornell Medical College
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- Afshin, Evan (author)
- Weill Cornell Med, Dept Physiol & Biophys, New York, NY 10065 USA.,Weill Cornell Medical College
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- Grills, George (author)
- Univ Miami, Miami, FL USA.,University of Miami
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- Iraola, Gregorio (author)
- Inst Pasteur Montevideo, Mataojo 2020, Montevideo 11400, Uruguay.,Pasteur Institute Of Montevideo
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- Suzuki, Haruo (author)
- Keio Univ, Tokyo, Japan.,Keio University
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- Werner, Johannes (author)
- Eberhard Karls Univ Tubingen, High Performance & Comp Grp fur Datenverarbeitung, Tubingen, Germany.,University of Tübingen
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- Udekwu, Klas (author)
- Uppsala University,Uppsala universitet,Gastroenterologi/hepatologi
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- Schriml, Lynn (author)
- Univ Maryland, Sch Med, Baltimore, MD USA.,University of Maryland School of Medicine
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- Bhattacharyya, Malay (author)
- Indian Stat Inst, Kolkata, India.,Indian Statistical Institute, Kolkata
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- Oliveira, Manuela (author)
- Univ Porto, Porto, Portugal.,University of Porto
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- Zambrano, Maria Mercedes (author)
- Corp Corpogen, Bogota, Colombia.
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- Hazrin-Chong, Nur Hazlin (author)
- Univ Kebangsaan Malaysia, Bangi, Malaysia.,Universiti Kebangsaan Malaysia
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- Osuolale, Olayinka (author)
- Elizade Univ, Ilara Mokin, Nigeria.,Elizade University
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- Labaj, Pawel P. (author)
- MCB Jagiellonian Univ, Krakow, Poland.,Jagiellonian University
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- Tiasse, Prisca (author)
- MCB Jagiellonian Univ, Krakow, Poland.,Jagiellonian University
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- Rapuri, Sampath (author)
- Community Lab, Los Alamos, NM 87544 USA.
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- Borras, Silvia (author)
- Barcelona Inst Hlth, Rossello, Rossello 132, Barcelona 708036, Spain.,Centre for Research in Environmental Epidemiology
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- Pozdniakova, Sofya (author)
- Barcelona Inst Hlth, Rossello, Rossello 132, Barcelona 708036, Spain.,Centre for Research in Environmental Epidemiology
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- Shi, Tieliu (author)
- Zhongshan Rd N 3663, Shanghai, Peoples R China.,East China Normal University
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- Sezerman, Ugur (author)
- Dept Biostat Univ, Istanbul, Turkey.,Acıbadem Mehmet Ali Aydınlar University
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- Rodo, Xavier (author)
- Barcelona Inst Hlth, Rossello, Rossello 132, Barcelona 708036, Spain.,Centre for Research in Environmental Epidemiology
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- Sezer, Zehra Hazal (author)
- Univ Tubingen, Tubingen, Germany.,University of Tübingen
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- Mason, Christopher E. (author)
- Weill Cornell Med, Dept Physiol & Biophys, New York, NY 10065 USA.;WorldQuant Initiat Quantitat Predict, New York, NY 10065 USA.
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Weill Cornell Med, Dept Physiol & Biophys, New York, NY USA Weill Cornell Medical College (creator_code:org_t)
- Cell Press, 2022
- 2022
- English.
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In: iScience. - : Cell Press. - 2589-0042. ; 25:11
- Related links:
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https://uu.diva-port... (primary) (Raw object)
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http://dx.doi.org/10... (free)
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https://urn.kb.se/re...
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Abstract
Subject headings
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- The MetaSUB Consortium, founded in 2015, is a global consortium with an interdisciplinary team of clinicians, scientists, bioinformaticians, engineers, and designers, with members from more than 100 countries across the globe. This network has continually collected samples from urban and rural sites including subways and transit systems, sewage systems, hospitals, and other environmental sampling. These collections have been ongoing since 2015 and have continued when possible, even throughout the COVID-19 pandemic. The consortium has optimized their workflow for the collection, isolation, and sequencing of DNA and RNA collected from these various sites and processing them for metagenomics analysis, including the identification of SARS-CoV-2 and its variants. Here, the Consortium describes its foundations, and its ongoing work to expand on this network and to focus its scope on the mapping, annotation, and prediction of emerging pathogens, mapping microbial evolution and antibiotic resistance, and the discovery of novel organisms and biosynthetic gene clusters.
Subject headings
- NATURVETENSKAP -- Biologi -- Bioinformatik och systembiologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Bioinformatics and Systems Biology (hsv//eng)
- NATURVETENSKAP -- Biologi -- Biokemi och molekylärbiologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Biochemistry and Molecular Biology (hsv//eng)
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- ref (subject category)
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- By the author/editor
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Ryon, Krista A.
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Tierney, Braden ...
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Frolova, Alina
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Kahles, Andre
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Desnues, Christe ...
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Ouzounis, Christ ...
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show more...
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Gibas, Cynthis
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Bezdan, Daniela
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Deng, Youping
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He, Ding
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Dias-Neto, Emman ...
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Elhaik, Eran
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Afshin, Evan
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Grills, George
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Iraola, Gregorio
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Suzuki, Haruo
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Werner, Johannes
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Udekwu, Klas
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Schriml, Lynn
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Bhattacharyya, M ...
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Oliveira, Manuel ...
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Zambrano, Maria ...
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Hazrin-Chong, Nu ...
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Osuolale, Olayin ...
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Labaj, Pawel P.
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Tiasse, Prisca
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Rapuri, Sampath
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Borras, Silvia
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Pozdniakova, Sof ...
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Shi, Tieliu
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Sezerman, Ugur
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Rodo, Xavier
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Sezer, Zehra Haz ...
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Mason, Christoph ...
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
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and Bioinformatics a ...
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
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and Biochemistry and ...
- Articles in the publication
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iScience
- By the university
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Uppsala University
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Lund University