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How, not if, is the...
How, not if, is the question mycologists should be asking about DNA-based typification
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- Nilsson, R. Henrik, 1976 (author)
- Gothenburg University,Göteborgs universitet,Institutionen för biologi och miljövetenskap,Department of Biological and Environmental Sciences,Univ Gothenburg, Gothenburg Global Biodivers Ctr, Dept Biol & Environm Sci, Box 461, S-40530 Gothenburg, Sweden.
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- Ryberg, Martin (author)
- Uppsala universitet,Systematisk biologi,Uppsala University
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- Wurzbacher, Christian (author)
- Tech Univ Munich, Chair Urban Water Syst Engn, Coulombwall 3, D-85748 Garching, Germany.,Technische Universität München (TUM),Technical University of Munich (TUM)
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- Tedersoo, Leho (author)
- Univ Tartu, Mycol & Microbiol Ctr, Liivi 2, EE-50409 Tartu, Estonia.;King Saud Univ, Coll Sci, Riyadh, Saudi Arabia.,King Saud University,Tartu Ülikool,University of Tartu
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- Anslan, Sten (author)
- Univ Tartu, Mycol & Microbiol Ctr, Liivi 2, EE-50409 Tartu, Estonia.,Tartu Ülikool,University of Tartu
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- Polme, Sergei (author)
- Univ Tartu, Inst Ecol & Earth Sci, Liivi 2, EE-50409 Tartu, Estonia.,Tartu Ülikool,University of Tartu
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- Spirin, Viacheslav (author)
- Gothenburg University,Göteborgs universitet,Institutionen för biologi och miljövetenskap,Department of Biological and Environmental Sciences,Univ Gothenburg, Gothenburg Global Biodivers Ctr, Dept Biol & Environm Sci, Box 461, S-40530 Gothenburg, Sweden.;Univ Helsinki, Bot Unit Mycol, Finnish Museum Nat Hist, POB 7, Helsinki 00014, Finland.
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- Mikryukov, Vladimir (author)
- Univ Tartu, Inst Ecol & Earth Sci, Liivi 2, EE-50409 Tartu, Estonia.,Tartu Ülikool,University of Tartu
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- Svantesson, Sten (author)
- Gothenburg University,Uppsala universitet,Systematisk biologi,Univ Gothenburg, Gothenburg Global Biodivers Ctr, Dept Biol & Environm Sci, Box 461, S-40530 Gothenburg, Sweden.,Göteborgs universitet,University of Gothenburg,Uppsala University,Institutionen för biologi och miljövetenskap,Department of Biological and Environmental Sciences
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- Hartmann, Martin (author)
- Swiss Fed Inst Technol, Dept Environm Syst Sci, Univ Str 2, CH-8092 Zurich, Switzerland.,Eidgenössische Technische Hochschule Zürich (ETH),Swiss Federal Institute of Technology in Zürich (ETH)
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- Lennartsdotter, Charlotte, 1967 (author)
- Gothenburg University,Göteborgs universitet,Institutionen för biologi och miljövetenskap,Department of Biological and Environmental Sciences,Univ Gothenburg, Gothenburg Global Biodivers Ctr, Dept Biol & Environm Sci, Box 461, S-40530 Gothenburg, Sweden.
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- Belford, Pauline, 1976 (author)
- Chalmers Univ Technol, Interact Design & Software Engn, Lindholmsplatsen 1, S-41756 Gothenburg, Sweden.,Chalmers tekniska högskola,Chalmers University of Technology
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- Khomich, Maryia (author)
- Univ Bergen, Dept Clin Sci, Box 7804, N-5020 Bergen, Norway.,Universitetet i Bergen,University of Bergen
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- Retter, Alice (author)
- Univ Vienna, Dept Funct & Evolutionary Ecol, Djerassipl 1, A-1030 Vienna, Austria.,Universität Wien,University of Vienna
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- Corcoll, Natàlia, 1981 (author)
- Gothenburg University,Göteborgs universitet,Institutionen för biologi och miljövetenskap,Department of Biological and Environmental Sciences,Univ Gothenburg, Gothenburg Global Biodivers Ctr, Dept Biol & Environm Sci, Box 461, S-40530 Gothenburg, Sweden.
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- Gómez Martinez, Daniela, 1997 (author)
- Gothenburg University,Göteborgs universitet,Institutionen för biologi och miljövetenskap,Department of Biological and Environmental Sciences,Univ Gothenburg, Gothenburg Global Biodivers Ctr, Dept Biol & Environm Sci, Box 461, S-40530 Gothenburg, Sweden.
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- Jansson, Tobias (author)
- Gothenburg University,Göteborgs universitet,Institutionen för biologi och miljövetenskap,Department of Biological and Environmental Sciences,Univ Gothenburg, Gothenburg Global Biodivers Ctr, Dept Biol & Environm Sci, Box 461, S-40530 Gothenburg, Sweden.
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Ghobad-Nejhad, Masoomeh (author)
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- Vu, Duong (author)
- Westerdijk Fungal Biodivers Inst, Uppsalalaan 8, NL-3584 Utrecht, Netherlands.
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- Sanchez-Garcia, Marisol (author)
- Swedish University of Agricultural Sciences,Sveriges lantbruksuniversitet,Department of Forest Mycology and Plant Pathology,Sveriges lantbruksuniversitet (SLU),Swedish University of Agricultural Sciences (SLU),Iranian Res Org Sci & Technol, Dept Biotechnol, POB 3353-5111, Tehran 3353136846, Iran.;Swedish Univ Agr Sci, Dept Forest Mycol & Plant Pathol, Box 7026, S-75007 Uppsala, Sweden.
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- Kristiansson, Erik, 1978 (author)
- Chalmers Univ Technol, Dept Math Sci, Gothenburg, Sweden.,Chalmers tekniska högskola,Chalmers University of Technology,Göteborgs universitet,University of Gothenburg
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- Abarenkov, Kessy (author)
- Univ Tartu, Nat Hist Museum, Vanemuise 46, EE-51014 Tartu, Estonia.,Tartu Ülikool,University of Tartu
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(creator_code:org_t)
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- Pensoft Publishers, 2023
- 2023
- English.
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In: MycoKeys. - : Pensoft Publishers. - 1314-4057 .- 1314-4049. ; :96, s. 143-157
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Abstract
Subject headings
Close
- Fungal metabarcoding of substrates such as soil, wood, and water is uncovering an unprecedented number of fungal species that do not seem to produce tangible morphological structures and that defy our best attempts at cultivation, thus falling outside the scope of the International Code of Nomenclature for algae, fungi, and plants. The present study uses the new, ninth release of the species hypotheses of the UNITE database to show that species discovery through environmental sequencing vastly outpaces traditional, Sanger sequencing-based efforts in a strongly increasing trend over the last five years. Our findings chal-lenge the present stance of some in the mycological community - that the current situation is satisfactory and that no change is needed to "the code" - and suggest that we should be discussing not whether to allow DNA-based descriptions (typifications) of species and by extension higher ranks of fungi, but what the precise requirements for such DNA-based typifications should be. We submit a tentative list of such criteria for further discussion. The present authors hope for a revitalized and deepened discussion on DNA-based typification, because to us it seems harmful and counter-productive to intentionally deny the overwhelming majority of extant fungi a formal standing under the International Code of Nomenclature for algae, fungi, and plants.
Subject headings
- NATURVETENSKAP -- Biologi -- Biologisk systematik (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Biological Systematics (hsv//eng)
- NATURVETENSKAP -- Biologi -- Ekologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Ecology (hsv//eng)
- NATURVETENSKAP -- Biologi -- Mikrobiologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Microbiology (hsv//eng)
- NATURVETENSKAP -- Biologi -- Bioinformatik och systembiologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Bioinformatics and Systems Biology (hsv//eng)
- NATURVETENSKAP -- Biologi -- Botanik (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Botany (hsv//eng)
- NATURVETENSKAP -- Biologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences (hsv//eng)
- HUMANIORA -- Filosofi, etik och religion -- Filosofi (hsv//swe)
- HUMANITIES -- Philosophy, Ethics and Religion -- Philosophy (hsv//eng)
- NATURVETENSKAP -- Biologi -- Annan biologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Other Biological Topics (hsv//eng)
Keyword
- Dark taxa
- ICN
- nomenclature
- species description
- taxonomy
- type principle
Publication and Content Type
- ref (subject category)
- art (subject category)
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Nilsson, R. Henr ...
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Ryberg, Martin
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Wurzbacher, Chri ...
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Tedersoo, Leho
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Anslan, Sten
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Polme, Sergei
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Spirin, Viachesl ...
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Mikryukov, Vladi ...
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Svantesson, Sten
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Hartmann, Martin
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Lennartsdotter, ...
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Belford, Pauline ...
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Khomich, Maryia
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Retter, Alice
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Corcoll, Natàlia ...
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Gómez Martinez, ...
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Jansson, Tobias
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Ghobad-Nejhad, M ...
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Vu, Duong
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Sanchez-Garcia, ...
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Kristiansson, Er ...
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Abarenkov, Kessy
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