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Metaxa, overview
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- Bengtsson-Palme, Johan, 1985 (author)
- Gothenburg University,Göteborgs universitet,Institutionen för neurovetenskap och fysiologi, sektionen för fysiologi,Institute of Neuroscience and Physiology, Department of Physiology,University of Gothenburg
- Hartmann, Martin (author)
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- Eriksson, Martin, 1970 (author)
- Gothenburg University,Göteborgs universitet,Institutionen för biologi och miljövetenskap,Department of Biological and Environmental Sciences,University of Gothenburg
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- (creator_code:org_t)
- Berlin : Springer, 2013
- 2013
- English.
- In: Encyclopedia of Metagenomics. - Berlin : Springer.
- Book chapter (peer-reviewed)
Abstract
Subject headings
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- Metaxa is a software tool for extracting full-length and partial ribosomal small subunit (SSU; 16S/18S/12S) sequences from metagenomic datasets, and for classifying the extracted sequences to taxonomic domains and organelle of origin. Metaxa is freely available from http://microbiology.se/software/metaxa
Subject headings
- NATURVETENSKAP -- Biologi -- Ekologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Ecology (hsv//eng)
- NATURVETENSKAP -- Biologi -- Bioinformatik och systembiologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Bioinformatics and Systems Biology (hsv//eng)
- NATURVETENSKAP -- Biologi -- Mikrobiologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Microbiology (hsv//eng)
Keyword
- Metagenomics
- Microbial communities
- rRNA libraries
- Phylogenetic assignment
- Metagenomik
- Mikrobiella samhällen
- rRNA-bibliotek
- rRNA libraries
Publication and Content Type
- ref (subject category)
- kap (subject category)
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