Search: onr:"swepub:oai:gup.ub.gu.se/282836" >
Towards a standardi...
-
Rojas-Macias, Miguel A.,1979University of Gothenburg,Gothenburg University,Göteborgs universitet,Institutionen för biomedicin, avdelningen för medicinsk kemi och cellbiologi,Institute of Biomedicine, Department of Medical Biochemistry and Cell Biology
(author)
Towards a standardized bioinformatics infrastructure for N- and O-glycomics
- Article/chapterEnglish2019
Publisher, publication year, extent ...
-
2019-07-22
-
Springer Science and Business Media LLC,2019
Numbers
-
LIBRIS-ID:oai:gup.ub.gu.se/282836
-
https://gup.ub.gu.se/publication/282836URI
-
https://doi.org/10.1038/s41467-019-11131-xDOI
-
https://lup.lub.lu.se/record/93e00fe5-1261-46bc-b7d5-bf1c29fc3a27URI
Supplementary language notes
Part of subdatabase
Classification
-
Subject category:ref swepub-contenttype
-
Subject category:art swepub-publicationtype
Notes
-
The mass spectrometry (MS)-based analysis of free polysaccharides and glycans released from proteins, lipids and proteoglycans increasingly relies on databases and software. Here, we review progress in the bioinformatics analysis of protein-released N- and O-linked glycans (N-and O-glycomics) and propose an e-infrastructure to overcome current deficits in data and experimental transparency. This workflow enables the standardized submission of MS-based glycomics information into the public repository UniCarb-DR. It implements the MIRAGE (Minimum Requirement for A Glycomics Experiment) reporting guidelines, storage of unprocessed MS data in the GlycoPOST repository and glycan structure registration using the GlyTouCan registry, thereby supporting the development and extension of a glycan structure knowledgebase.
Subject headings and genre
Added entries (persons, corporate bodies, meetings, titles ...)
-
Mariethoz, J.University of Geneva
(author)
-
Andersson, PeterUniversity of Gothenburg,Gothenburg University,Göteborgs universitet,Institutionen för biomedicin, avdelningen för medicinsk kemi och cellbiologi,Institute of Biomedicine, Department of Medical Biochemistry and Cell Biology
(author)
-
Jin, ChunshengUniversity of Gothenburg,Gothenburg University,Göteborgs universitet,Institutionen för biomedicin, avdelningen för medicinsk kemi och cellbiologi,Institute of Biomedicine, Department of Medical Biochemistry and Cell Biology(Swepub:gu)xjinch
(author)
-
Venkatakrishnan, Vignesh,1987University of Gothenburg,Gothenburg University,Göteborgs universitet,Institutionen för biomedicin, avdelningen för medicinsk kemi och cellbiologi,Institute of Biomedicine, Department of Medical Biochemistry and Cell Biology(Swepub:gu)xvenvi
(author)
-
Aoki, N. P.SparqLite LLC.
(author)
-
Shinmachi, D.SparqLite LLC.
(author)
-
Ashwood, C.Medical College of Wisconsin
(author)
-
Madunic, K.Leiden University
(author)
-
Zhang, T.Leiden University
(author)
-
Miller, R. L.University of Copenhagen
(author)
-
Horlacher, O.Swiss Institute for Bioinformatics (SIB)
(author)
-
Struwe, W. B.University of Oxford
(author)
-
Watanabe, Y.Niigata University
(author)
-
Okuda, S.Niigata University
(author)
-
Levander, FredrikLund University,Lunds universitet,Institutionen för immunteknologi,Institutioner vid LTH,Lunds Tekniska Högskola,Department of Immunotechnology,Departments at LTH,Faculty of Engineering, LTH,National Bioinformatics Infrastructure Sweden (NBIS), SciLifeLab(Swepub:lu)tmb-fle
(author)
-
Kolarich, D.ARC Centre of Excellence for Nanoscale BioPhotonics
(author)
-
Rudd, P. M.A*Star, Bioprocessing Technology Institute (BTI)
(author)
-
Wuhrer, M.Leiden University
(author)
-
Kettner, C.Beilstein Institute for the Advancement of Chemical Sciences
(author)
-
Packer, N. H.ARC Centre of Excellence for Nanoscale BioPhotonics
(author)
-
Aoki-Kinoshita, K. F.Soka University
(author)
-
Lisacek, F.University of Geneva
(author)
-
Karlsson, N. G.University of Gothenburg
(author)
-
Göteborgs universitetInstitutionen för biomedicin, avdelningen för medicinsk kemi och cellbiologi
(creator_code:org_t)
Related titles
-
In:Nature Communications: Springer Science and Business Media LLC102041-1723
Internet link
Find in a library
To the university's database
- By the author/editor
-
Rojas-Macias, Mi ...
-
Mariethoz, J.
-
Andersson, Peter
-
Jin, Chunsheng
-
Venkatakrishnan, ...
-
Aoki, N. P.
-
show more...
-
Shinmachi, D.
-
Ashwood, C.
-
Madunic, K.
-
Zhang, T.
-
Miller, R. L.
-
Horlacher, O.
-
Struwe, W. B.
-
Watanabe, Y.
-
Okuda, S.
-
Levander, Fredri ...
-
Kolarich, D.
-
Rudd, P. M.
-
Wuhrer, M.
-
Kettner, C.
-
Packer, N. H.
-
Aoki-Kinoshita, ...
-
Lisacek, F.
-
Karlsson, N. G.
-
show less...
- About the subject
-
- NATURAL SCIENCES
-
NATURAL SCIENCES
-
and Biological Scien ...
-
and Biochemistry and ...
-
- MEDICAL AND HEALTH SCIENCES
-
MEDICAL AND HEAL ...
-
and Medical Biotechn ...
-
and Biomedical Labor ...
- Articles in the publication
-
Nature Communica ...
- By the university
-
University of Gothenburg
-
Lund University