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Introducing guideli...
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Nilsson, R. Henrik,1976Gothenburg University,Göteborgs universitet,Institutionen för biologi och miljövetenskap,Department of Biological and Environmental Sciences,University of Gothenburg, Department of Biological and Environmental Sciences, Gothenburg Global Biodiversity Centre, Box 461, 405 30 Göteborg, Sweden, Box 461
(author)
Introducing guidelines for publishing DNA-derived occurrence data through biodiversity data platforms
- Article/chapterEnglish2022
Publisher, publication year, extent ...
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2022-08-02
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Pensoft Publishers,2022
Numbers
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LIBRIS-ID:oai:gup.ub.gu.se/319605
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https://gup.ub.gu.se/publication/319605URI
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https://doi.org/10.3897/mbmg.6.84960DOI
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https://urn.kb.se/resolve?urn=urn:nbn:se:kth:diva-331160URI
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https://urn.kb.se/resolve?urn=urn:nbn:se:lnu:diva-123739URI
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Subject category:ref swepub-contenttype
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Subject category:art swepub-publicationtype
Notes
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QC 20230707
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DNA sequencing efforts of environmental and other biological samples disclose unprecedented and largely untapped opportunities for advances in the taxonomy, ecology, and geographical distributions of our living world. To realise this potential, DNA-derived occurrence data (notably sequences with dates and coordinates) – much like traditional specimens and observations – need to be discoverable and interpretable through biodiversity data platforms. The Global Biodiversity Information Facility (GBIF) recently headed a community effort to assemble a set of guidelines for publishing DNA-derived data. These guidelines target the principles and approaches of exposing DNA-derived occurrence data in the context of broader biodiversity data. They cover a choice of terms using a controlled vocabulary, common pitfalls, and good practices, without going into platform-specific details. Our hope is that they will benefit anyone interested in better exposure of DNA-derived occurrence data through general biodiversity data platforms, including national biodiversity portals. This paper provides a brief rationale and an overview of the guidelines, an up-to-date version of which is maintained at https://doi.org/10.35035/doc-vf1a-nr22. User feedback and interaction are encouraged as new techniques and best practices emerge.
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Andersson, Anders F.KTH,Science for Life Laboratory, SciLifeLab,Genteknologi,Norwegian institute for nature research (NINA), P.O. Box 5685 Torgarden, NO-7485 Trondheim, Norway, P.O. Box 5685 Torgarden,KTH Royal instute of technology, Sweden(Swepub:kth)u1hi776x
(author)
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Bissett, AndrewCSIRO O&A, GPO box 1533, Hobart, Tasmania, 7000, Australia, GPO box 1533
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Finstad, Anders G.Department of Natural History, Centre for Biodiversity Dynamics, Norwegian University of Science and Technology, Trondheim, Norway
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Fossøy, Frode
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Grosjean, MarieGlobal Biodiversity Information Facility (GBIF), Secretariat, Universitetsparken 15, 2100 København Ø, Denmark, Universitetsparken 15, København Ø
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Hope, MichaelAtlas of Living Australia, CSIRO National Collections & Marine Infrastructure, GPO Box 1700, Canberra ACT 2601, Australia, GPO Box 1700
(author)
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Jeppesen, Thomas S.Global Biodiversity Information Facility (GBIF), Secretariat, Universitetsparken 15, 2100 København Ø, Denmark, Universitetsparken 15, København Ø,UNESCO Intergovernmental Oceanographic Commission (IOC), Ocean Biodiversity Information System (OBIS), IOC Project Office for IODE, Oostende, Belgium
(author)
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Kõljalg, UrmasNatural History Museum and Botanical Garden, University of Tartu, 46 Vanemuise Street, 51003 Tartu, Estonia, 46 Vanemuise Street
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Lundin, Daniel,1965-Linnéuniversitetet,Institutionen för biologi och miljö (BOM)(Swepub:lnu)daluab
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Prager, MariaScience for Life Laboratory, Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden; Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Solna, Sweden
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Suominen, SaaraNatural History Museum of Denmark, University of Copenhagen, Øster Voldgade 5-7, 1350 Copenhagen, Denmark, Øster Voldgade 5-7
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Svenningsen, Cecilie S.
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Schigel, DmitryGlobal Biodiversity Information Facility (GBIF), Secretariat, Universitetsparken 15, 2100 København Ø, Denmark, Universitetsparken 15, København Ø
(author)
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Göteborgs universitetInstitutionen för biologi och miljövetenskap
(creator_code:org_t)
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In:Metabarcoding and Metagenomics: Pensoft Publishers6, s. 239-2442534-9708
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