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Genomic analysis of...
Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance
- Article/chapterEnglish2022
Publisher, publication year, extent ...
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2022-12-01
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Springer Science and Business Media LLC,2022
Numbers
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LIBRIS-ID:oai:gup.ub.gu.se/324450
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https://gup.ub.gu.se/publication/324450URI
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https://doi.org/10.1038/s41467-022-34312-7DOI
Supplementary language notes
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Subject category:ref swepub-contenttype
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Subject category:art swepub-publicationtype
Notes
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Antimicrobial resistance (AMR) is a major threat to global health. Understanding the emergence, evolution, and transmission of individual antibiotic resistance genes (ARGs) is essential to develop sustainable strategies combatting this threat. Here, we use metagenomic sequencing to analyse ARGs in 757 sewage samples from 243 cities in 101 countries, collected from 2016 to 2019. We find regional patterns in resistomes, and these differ between subsets corresponding to drug classes and are partly driven by taxonomic variation. The genetic environments of 49 common ARGs are highly diverse, with most common ARGs carried by multiple distinct genomic contexts globally and sometimes on plasmids. Analysis of flanking sequence revealed ARG-specific patterns of dispersal limitation and global transmission. Our data furthermore suggest certain geographies are more prone to transmission events and should receive additional attention.
Subject headings and genre
Added entries (persons, corporate bodies, meetings, titles ...)
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Brinch, C.
(author)
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Møller, F. D.
(author)
-
Petersen, T. N.
(author)
-
Hendriksen, R. S.
(author)
-
Seyfarth, A. M.
(author)
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Kjeldgaard, J. S.
(author)
-
Svendsen, C. A.
(author)
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van Bunnik, B.
(author)
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Berglund, FannyGothenburg University,Göteborgs universitet,CARe - Centrum för antibiotikaresistensforskning,Centre for antibiotic resistance research, CARe(Swepub:gu)xberfa
(author)
-
Bego, A.
(author)
-
Power, P.
(author)
-
Rees, C.
(author)
-
Lambrinidis, D.
(author)
-
Neilson, E. H. J.
(author)
-
Gibb, K.
(author)
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Coventry, K.
(author)
-
Collignon, P.
(author)
-
Cassar, S.
(author)
-
Allerberger, F.
(author)
-
Begum, A.
(author)
-
Hossain, Z. Z.
(author)
-
Worrell, C.
(author)
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Vandenberg, O.
(author)
-
Pieters, I.
(author)
-
Victorien, D. T.
(author)
-
Gutierrez, A. D. S.
(author)
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Soria, F.
(author)
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Grujić, V. R.
(author)
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Mazalica, N.
(author)
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Rahube, T. O.
(author)
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Tagliati, C. A.
(author)
-
Rodrigues, D.
(author)
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Oliveira, G.
(author)
-
de Souza, L. C. R.
(author)
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Ivanov, I.
(author)
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Juste, B. I.
(author)
-
Oumar, T.
(author)
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Sopheak, T.
(author)
-
Vuthy, Y.
(author)
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Ngandijo, A.
(author)
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Nzouankeu, A.
(author)
-
Olivier, Z. A. A. J.
(author)
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Yost, C. K.
(author)
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Kumar, P.
(author)
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Brar, S. K.
(author)
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Tabo, D. A.
(author)
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Adell, A. D.
(author)
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Paredes-Osses, E.
(author)
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Martinez, M. C.
(author)
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Cuadros-Orellana, S.
(author)
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Ke, C.
(author)
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Zheng, H.
(author)
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Baisheng, L.
(author)
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Lau, L. T.
(author)
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Chung, T.
(author)
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Jiao, X.
(author)
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Yu, Y.
(author)
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JiaYong, Z.
(author)
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Morales, J. F. B.
(author)
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Valencia, M. F.
(author)
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Donado-Godoy, P.
(author)
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Coulibaly, K. J.
(author)
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Hrenovic, J.
(author)
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Jergović, M.
(author)
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Karpíšková, R.
(author)
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Deogratias, Z. N.
(author)
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Elsborg, B.
(author)
-
Hansen, L. T.
(author)
-
Jensen, P. E.
(author)
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Abouelnaga, M.
(author)
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Salem, M. F.
(author)
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Koolmeister, M.
(author)
-
Legesse, M.
(author)
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Eguale, T.
(author)
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Heikinheimo, A.
(author)
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Le Guyader, S.
(author)
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Schaeffer, J.
(author)
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Villacis, J. E.
(author)
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Sanneh, B.
(author)
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Malania, L.
(author)
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Nitsche, A.
(author)
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Brinkmann, A.
(author)
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Schubert, S.
(author)
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Hesse, S.
(author)
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Berendonk, T. U.
(author)
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Saba, C. K. S.
(author)
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Mohammed, J.
(author)
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Feglo, P. K.
(author)
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Banu, R. A.
(author)
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Kotzamanidis, C.
(author)
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Lytras, E.
(author)
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Lickes, S. A.
(author)
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Kocsis, B.
(author)
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Solymosi, N.
(author)
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Thorsteinsdottir, T. R.
(author)
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Hatha, A. M.
(author)
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Ballal, M.
(author)
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Bangera, S. R.
(author)
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Fani, F.
(author)
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Alebouyeh, M.
(author)
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Morris, D.
(author)
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O’Connor, L.
(author)
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Cormican, M.
(author)
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Moran-Gilad, J.
(author)
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Battisti, A.
(author)
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Diaconu, E. L.
(author)
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Corno, G.
(author)
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Di Cesare, A.
(author)
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Alba, P.
(author)
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Hisatsune, J.
(author)
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Yu, L.
(author)
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Kuroda, M.
(author)
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Sugai, M.
(author)
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Kayama, S.
(author)
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Shakenova, Z.
(author)
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Kiiyukia, C.
(author)
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Ng’eno, E.
(author)
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Raka, L.
(author)
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Jamil, K.
(author)
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Fakhraldeen, S. A.
(author)
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Alaati, T.
(author)
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Bērziņš, A.
(author)
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Avsejenko, J.
(author)
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Kokina, K.
(author)
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Streikisa, M.
(author)
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Bartkevics, V.
(author)
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Matar, G. M.
(author)
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Daoud, Z.
(author)
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Pereckienė, A.
(author)
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Butrimaite-Ambrozeviciene, C.
(author)
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Penny, C.
(author)
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Bastaraud, A.
(author)
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Rasolofoarison, T.
(author)
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Collard, J. M.
(author)
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Samison, L. H.
(author)
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Andrianarivelo, M. R.
(author)
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Banda, D. L.
(author)
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Amin, A.
(author)
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Rajandas, H.
(author)
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Parimannan, S.
(author)
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Spiteri, D.
(author)
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Haber, M. V.
(author)
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Santchurn, S. J.
(author)
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Vujacic, A.
(author)
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Djurovic, D.
(author)
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Bouchrif, B.
(author)
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Karraouan, B.
(author)
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Vubil, D. C.
(author)
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Pal, P.
(author)
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Schmitt, H.
(author)
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van Passel, M.
(author)
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Jeunen, G. J.
(author)
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Gemmell, N.
(author)
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Chambers, S. T.
(author)
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Mendoza, F. P.
(author)
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Huete-Pιrez, J.
(author)
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Vilchez, S.
(author)
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Ahmed, A. O.
(author)
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Adisa, I. R.
(author)
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Odetokun, I. A.
(author)
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Fashae, K.
(author)
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Sørgaard, A. M.
(author)
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Wester, A. L.
(author)
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Ryrfors, P.
(author)
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Holmstad, R.
(author)
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Mohsin, M.
(author)
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Hasan, R.
(author)
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Shakoor, S.
(author)
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Gustafson, N. W.
(author)
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Schill, C. H.
(author)
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Rojas, M. L. Z.
(author)
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Velasquez, J. E.
(author)
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Magtibay, B. B.
(author)
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Catangcatang, K.
(author)
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Sibulo, R.
(author)
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Yauce, F. C.
(author)
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Wasyl, D.
(author)
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Manaia, C.
(author)
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Rocha, J.
(author)
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Martins, J.
(author)
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Álvaro, P.
(author)
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Di Yoong Wen, D.
(author)
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Shin, H.
(author)
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Hur, H. G.
(author)
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Yoon, S.
(author)
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Bosevska, G.
(author)
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Kochubovski, M.
(author)
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Cojocaru, R.
(author)
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Burduniuc, O.
(author)
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Hong, P. Y.
(author)
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Perry, M. R.
(author)
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Gassama, A.
(author)
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Radosavljevic, V.
(author)
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Tay, M. Y. F.
(author)
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Zuniga-Montanez, R.
(author)
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Wuertz, S.
(author)
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Gavačová, D.
(author)
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Pastuchová, K.
(author)
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Truska, P.
(author)
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Trkov, M.
(author)
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Keddy, K.
(author)
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Esterhuyse, K.
(author)
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Song, M. J.
(author)
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Quintela-Baluja, M.
(author)
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Lopez, M. G.
(author)
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Cerdà-Cuéllar, M.
(author)
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Perera, R. R. D. P.
(author)
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Bandara, N. K. B. K. R. G. W.
(author)
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Premasiri, H. I.
(author)
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Pathirage, S.
(author)
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Charlemagne, K.
(author)
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Rutgersson, Carolin,1983
(author)
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Norrgren, L.
(author)
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Örn, S.
(author)
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Boss, R.
(author)
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Van der Heijden, T.
(author)
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Hong, Y. P.
(author)
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Kumburu, H. H.
(author)
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Mdegela, R. H.
(author)
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Hounmanou, Y. M. G.
(author)
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Chonsin, K.
(author)
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Suthienkul, O.
(author)
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Thamlikitkul, V.
(author)
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de Roda Husman, A. M.
(author)
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Bidjada, B.
(author)
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Njanpop-Lafourcade, B. M.
(author)
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Nikiema-Pessinaba, S. C.
(author)
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Levent, B.
(author)
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Kurekci, C.
(author)
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Ejobi, F.
(author)
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Kalule, J. B.
(author)
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Thomsen, J.
(author)
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Obaidi, O.
(author)
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Jassim, L. M.
(author)
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Moore, A.
(author)
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Leonard, A.
(author)
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Graham, D. W.
(author)
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Bunce, J. T.
(author)
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Zhang, L.
(author)
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Gaze, W. H.
(author)
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Lefor, B.
(author)
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Capone, D.
(author)
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Sozzi, E.
(author)
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Brown, J.
(author)
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Meschke, J. S.
(author)
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Sobsey, M. D.
(author)
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Davis, M.
(author)
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Beck, N. K.
(author)
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Sukapanpatharam, P.
(author)
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Truong, P.
(author)
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Lilienthal, R.
(author)
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Kang, S.
(author)
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Wittum, T. E.
(author)
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Rigamonti, N.
(author)
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Baklayan, P.
(author)
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Van, C. D.
(author)
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Tran, D. M. N.
(author)
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Do Phuc, N.
(author)
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Kwenda, G.
(author)
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Koopmans, M.
(author)
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Woolhouse, M.
(author)
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Aarestrup, F. M.
(author)
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Larsson, D. G. Joakim,1969Gothenburg University,Göteborgs universitet,CARe - Centrum för antibiotikaresistensforskning,Institutionen för biomedicin, avdelningen för infektionssjukdomar,Centre for antibiotic resistance research, CARe,Institute of Biomedicine, Department of Infectious Medicine(Swepub:gu)xlarjo
(author)
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Göteborgs universitetCARe - Centrum för antibiotikaresistensforskning
(creator_code:org_t)
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In:Nature Communications: Springer Science and Business Media LLC13:12041-1723
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- By the author/editor
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Munk, P.
-
Brinch, C.
-
Møller, F. D.
-
Petersen, T. N.
-
Hendriksen, R. S ...
-
Seyfarth, A. M.
-
show more...
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Kjeldgaard, J. S ...
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Svendsen, C. A.
-
van Bunnik, B.
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Berglund, Fanny
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Bego, A.
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Power, P.
-
Rees, C.
-
Lambrinidis, D.
-
Neilson, E. H. J ...
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Gibb, K.
-
Coventry, K.
-
Collignon, P.
-
Cassar, S.
-
Allerberger, F.
-
Begum, A.
-
Hossain, Z. Z.
-
Worrell, C.
-
Vandenberg, O.
-
Pieters, I.
-
Victorien, D. T.
-
Gutierrez, A. D. ...
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Soria, F.
-
Grujić, V. R.
-
Mazalica, N.
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Rahube, T. O.
-
Tagliati, C. A.
-
Rodrigues, D.
-
Oliveira, G.
-
de Souza, L. C. ...
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Ivanov, I.
-
Juste, B. I.
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Oumar, T.
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Sopheak, T.
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Vuthy, Y.
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Ngandijo, A.
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Nzouankeu, A.
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Olivier, Z. A. A ...
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Yost, C. K.
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Kumar, P.
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Brar, S. K.
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Tabo, D. A.
-
Adell, A. D.
-
Paredes-Osses, E ...
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Martinez, M. C.
-
Cuadros-Orellana ...
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Ke, C.
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Zheng, H.
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Baisheng, L.
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Lau, L. T.
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Chung, T.
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Jiao, X.
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Yu, Y.
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JiaYong, Z.
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Morales, J. F. B ...
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Valencia, M. F.
-
Donado-Godoy, P.
-
Coulibaly, K. J.
-
Hrenovic, J.
-
Jergović, M.
-
Karpíšková, R.
-
Deogratias, Z. N ...
-
Elsborg, B.
-
Hansen, L. T.
-
Jensen, P. E.
-
Abouelnaga, M.
-
Salem, M. F.
-
Koolmeister, M.
-
Legesse, M.
-
Eguale, T.
-
Heikinheimo, A.
-
Le Guyader, S.
-
Schaeffer, J.
-
Villacis, J. E.
-
Sanneh, B.
-
Malania, L.
-
Nitsche, A.
-
Brinkmann, A.
-
Schubert, S.
-
Hesse, S.
-
Berendonk, T. U.
-
Saba, C. K. S.
-
Mohammed, J.
-
Feglo, P. K.
-
Banu, R. A.
-
Kotzamanidis, C.
-
Lytras, E.
-
Lickes, S. A.
-
Kocsis, B.
-
Solymosi, N.
-
Thorsteinsdottir ...
-
Hatha, A. M.
-
Ballal, M.
-
Bangera, S. R.
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Fani, F.
-
Alebouyeh, M.
-
Morris, D.
-
O’Connor, L.
-
Cormican, M.
-
Moran-Gilad, J.
-
Battisti, A.
-
Diaconu, E. L.
-
Corno, G.
-
Di Cesare, A.
-
Alba, P.
-
Hisatsune, J.
-
Yu, L.
-
Kuroda, M.
-
Sugai, M.
-
Kayama, S.
-
Shakenova, Z.
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Kiiyukia, C.
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Ng’eno, E.
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Raka, L.
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Jamil, K.
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Fakhraldeen, S. ...
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Alaati, T.
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Avsejenko, J.
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Kokina, K.
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Matar, G. M.
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Daoud, Z.
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Pereckienė, A.
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Butrimaite-Ambro ...
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Penny, C.
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Bastaraud, A.
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Rasolofoarison, ...
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Collard, J. M.
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Andrianarivelo, ...
-
Banda, D. L.
-
Amin, A.
-
Rajandas, H.
-
Parimannan, S.
-
Spiteri, D.
-
Haber, M. V.
-
Santchurn, S. J.
-
Vujacic, A.
-
Djurovic, D.
-
Bouchrif, B.
-
Karraouan, B.
-
Vubil, D. C.
-
Pal, P.
-
Schmitt, H.
-
van Passel, M.
-
Jeunen, G. J.
-
Gemmell, N.
-
Chambers, S. T.
-
Mendoza, F. P.
-
Huete-Pιrez, J.
-
Vilchez, S.
-
Ahmed, A. O.
-
Adisa, I. R.
-
Odetokun, I. A.
-
Fashae, K.
-
Sørgaard, A. M.
-
Wester, A. L.
-
Ryrfors, P.
-
Holmstad, R.
-
Mohsin, M.
-
Hasan, R.
-
Shakoor, S.
-
Gustafson, N. W.
-
Schill, C. H.
-
Rojas, M. L. Z.
-
Velasquez, J. E.
-
Magtibay, B. B.
-
Catangcatang, K.
-
Sibulo, R.
-
Yauce, F. C.
-
Wasyl, D.
-
Manaia, C.
-
Rocha, J.
-
Martins, J.
-
Álvaro, P.
-
Di Yoong Wen, D.
-
Shin, H.
-
Hur, H. G.
-
Yoon, S.
-
Bosevska, G.
-
Kochubovski, M.
-
Cojocaru, R.
-
Burduniuc, O.
-
Hong, P. Y.
-
Perry, M. R.
-
Gassama, A.
-
Radosavljevic, V ...
-
Tay, M. Y. F.
-
Zuniga-Montanez, ...
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Wuertz, S.
-
Gavačová, D.
-
Pastuchová, K.
-
Truska, P.
-
Trkov, M.
-
Keddy, K.
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Esterhuyse, K.
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Song, M. J.
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Quintela-Baluja, ...
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Lopez, M. G.
-
Cerdà-Cuéllar, M ...
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Perera, R. R. D. ...
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Bandara, N. K. B ...
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Premasiri, H. I.
-
Pathirage, S.
-
Charlemagne, K.
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Rutgersson, Caro ...
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Norrgren, L.
-
Örn, S.
-
Boss, R.
-
Van der Heijden, ...
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Hong, Y. P.
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Kumburu, H. H.
-
Mdegela, R. H.
-
Hounmanou, Y. M. ...
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Chonsin, K.
-
Suthienkul, O.
-
Thamlikitkul, V.
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de Roda Husman, ...
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Bidjada, B.
-
Njanpop-Lafourca ...
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Nikiema-Pessinab ...
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Levent, B.
-
Kurekci, C.
-
Ejobi, F.
-
Kalule, J. B.
-
Thomsen, J.
-
Obaidi, O.
-
Jassim, L. M.
-
Moore, A.
-
Leonard, A.
-
Graham, D. W.
-
Bunce, J. T.
-
Zhang, L.
-
Gaze, W. H.
-
Lefor, B.
-
Capone, D.
-
Sozzi, E.
-
Brown, J.
-
Meschke, J. S.
-
Sobsey, M. D.
-
Davis, M.
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Beck, N. K.
-
Sukapanpatharam, ...
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Truong, P.
-
Lilienthal, R.
-
Kang, S.
-
Wittum, T. E.
-
Rigamonti, N.
-
Baklayan, P.
-
Van, C. D.
-
Tran, D. M. N.
-
Do Phuc, N.
-
Kwenda, G.
-
Koopmans, M.
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Woolhouse, M.
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Aarestrup, F. M.
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Larsson, D. G. J ...
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- About the subject
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- MEDICAL AND HEALTH SCIENCES
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MEDICAL AND HEAL ...
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and Clinical Medicin ...
- Articles in the publication
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Nature Communica ...
- By the university
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University of Gothenburg