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Deep-learning-power...
Deep-learning-powered data analysis in plankton ecology
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- Bachimanchi, Harshith (author)
- University of Gothenburg,Gothenburg University,Göteborgs universitet,Institutionen för fysik (GU),Department of Physics (GU)
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- Pinder, Matthew I. M., 1990 (author)
- University of Gothenburg,Gothenburg University,Göteborgs universitet,Institutionen för marina vetenskaper,Department of marine sciences
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- Robert, Chloé (author)
- University of Gothenburg,Gothenburg University,Göteborgs universitet,Institutionen för marina vetenskaper,Department of marine sciences
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- De Wit, Pierre, 1978 (author)
- University of Gothenburg,Gothenburg University,Göteborgs universitet,Institutionen för biologi och miljövetenskap,Institutionen för marina vetenskaper, Tjärnö marinlaboratoriet,Department of Biological and Environmental Sciences,Department of marine sciences, Tjärnö Marine Laboratory
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- Havenhand, Jonathan N., 1959 (author)
- University of Gothenburg,Gothenburg University,Göteborgs universitet,Institutionen för marina vetenskaper, Tjärnö marinlaboratoriet,Department of marine sciences, Tjärnö Marine Laboratory
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- Kinnby, Alexandra, 1990 (author)
- University of Gothenburg,Gothenburg University,Göteborgs universitet,Institutionen för marina vetenskaper, Tjärnö marinlaboratoriet,Department of marine sciences, Tjärnö Marine Laboratory
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- Midtvedt, Daniel (author)
- University of Gothenburg,Gothenburg University,Göteborgs universitet,Institutionen för fysik (GU),Department of Physics (GU)
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- Selander, Erik, 1973 (author)
- Lund University,Lunds universitet,Gothenburg University,Göteborgs universitet,Institutionen för marina vetenskaper,Department of marine sciences,Akvatisk ekologi,Forskargrupper vid Lunds universitet,Funktionell ekologi,Avdelningar,Biologiska institutionen,Naturvetenskapliga fakulteten,Aquatic Ecology,Lund University Research Groups,Functional ecology,Sections,Department of Biology,Faculty of Science
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- Volpe, Giovanni, 1979 (author)
- University of Gothenburg,Gothenburg University,Göteborgs universitet,Institutionen för fysik (GU),Department of Physics (GU)
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(creator_code:org_t)
- 2024
- 2024
- English.
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In: Limnology And Oceanography Letters. - 2378-2242.
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Abstract
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- The implementation of deep learning algorithms has brought new perspectives to plankton ecology. Emerging as an alternative approach to established methods, deep learning offers objective schemes to investigate plankton organisms in diverse environments. We provide an overview of deep-learning-based methods including detection and classification of phytoplankton and zooplankton images, foraging and swimming behavior analysis, and finally ecological modeling. Deep learning has the potential to speed up the analysis and reduce the human experimental bias, thus enabling data acquisition at relevant temporal and spatial scales with improved reproducibility. We also discuss shortcomings and show how deep learning architectures have evolved to mitigate imprecise readouts. Finally, we suggest opportunities where deep learning is particularly likely to catalyze plankton research. The examples are accompanied by detailed tutorials and code samples that allow readers to apply the methods described in this review to their own data.
Subject headings
- NATURVETENSKAP -- Data- och informationsvetenskap -- Datorseende och robotik (hsv//swe)
- NATURAL SCIENCES -- Computer and Information Sciences -- Computer Vision and Robotics (hsv//eng)
- NATURVETENSKAP -- Biologi -- Mikrobiologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Microbiology (hsv//eng)
- NATURVETENSKAP -- Biologi -- Zoologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Zoology (hsv//eng)
- NATURVETENSKAP -- Biologi -- Ekologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Ecology (hsv//eng)
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- By the author/editor
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Bachimanchi, Har ...
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Pinder, Matthew ...
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Robert, Chloé
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De Wit, Pierre, ...
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Havenhand, Jonat ...
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Kinnby, Alexandr ...
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show more...
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Midtvedt, Daniel
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Selander, Erik, ...
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Volpe, Giovanni, ...
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- About the subject
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Computer and Inf ...
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and Computer Vision ...
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
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and Microbiology
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
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and Zoology
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
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and Ecology
- Articles in the publication
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Limnology And Oc ...
- By the university
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University of Gothenburg
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Lund University