A model species for agricultural pest genomics : The genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae)

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Schoville, Sean D.University of Wisconsin-Madison (author)

A model species for agricultural pest genomics : The genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae)

Article/chapterEnglish2018

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2018-01-31
Springer Science and Business Media LLC,2018
18 s.

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LIBRIS-ID:oai:lup.lub.lu.se:50ece736-2c4a-4e29-81cc-6b132f27752f
https://lup.lub.lu.se/record/50ece736-2c4a-4e29-81cc-6b132f27752fURI
https://doi.org/10.1038/s41598-018-20154-1DOI

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Language:English
Summary in:English

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The Colorado potato beetle is one of the most challenging agricultural pests to manage. It has shown a spectacular ability to adapt to a variety of solanaceaeous plants and variable climates during its global invasion, and, notably, to rapidly evolve insecticide resistance. To examine evidence of rapid evolutionary change, and to understand the genetic basis of herbivory and insecticide resistance, we tested for structural and functional genomic changes relative to other arthropod species using genome sequencing, transcriptomics, and community annotation. Two factors that might facilitate rapid evolutionary change include transposable elements, which comprise at least 17% of the genome and are rapidly evolving compared to other Coleoptera, and high levels of nucleotide diversity in rapidly growing pest populations. Adaptations to plant feeding are evident in gene expansions and differential expression of digestive enzymes in gut tissues, as well as expansions of gustatory receptors for bitter tasting. Surprisingly, the suite of genes involved in insecticide resistance is similar to other beetles. Finally, duplications in the RNAi pathway might explain why Leptinotarsa decemlineata has high sensitivity to dsRNA. The L. decemlineata genome provides opportunities to investigate a broad range of phenotypes and to develop sustainable methods to control this widely successful pest.

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Chen, Yolanda H.University of Vermont (author)
Andersson, Martin N.Lund University,Lunds universitet,Funktionell zoologi,Biologiska institutionen,Naturvetenskapliga fakulteten,Functional zoology,Department of Biology,Faculty of Science(Swepub:lu)ekol-mta (author)
Benoit, Joshua B.University of Cincinnati (author)
Bhandari, AnitaUniversity of Kiel (author)
Bowsher, Julia H.North Dakota State University (author)
Brevik, KristianUniversity of Vermont (author)
Cappelle, KaatGhent University (author)
Chen, Mei Ju M.USDA-ARS National Agricultural Library (author)
Childers, Anna K.USDA-ARS Insect Genetics and Biochemistry Research Unit,USDA-ARS Bee Research Lab (author)
Childers, ChristopherUSDA-ARS National Agricultural Library (author)
Christiaens, OlivierGhent University (author)
Clements, JustinUniversity of Wisconsin-Madison (author)
Didion, Elise M.University of Cincinnati (author)
Elpidina, Elena N.Lomonosov Moscow State University (author)
Engsontia, PatamarerkPrince of Songkla University (author)
Friedrich, MarkusWayne State University (author)
García-Robles, InmaculadaUniversity of Valencia (author)
Gibbs, Richard A.Baylor College of Medicine (author)
Goswami, ChandanNational Institute of Science Education and Research (author)
Grapputo, AlessandroUniversity of Padova (author)
Gruden, KristinaNational Institute of Biology Ljubljana (author)
Grynberg, MarcinInstitute of Biochemistry and Biophysics of the Polish Academy of Sciences (author)
Henrissat, BernardAix-Marseille University,King Abdulaziz University,INRA National Institute of Agricultural Research (author)
Jennings, Emily C.University of Cincinnati (author)
Jones, Jeffery W.Wayne State University (author)
Kalsi, MeghaUniversity of Kentucky (author)
Khan, Sher A.Texas A and M University (author)
Kumar, AbhishekGerman Cancer Research Centre,University of Kiel (author)
Li, FeiNanjing Agricultural University (author)
Lombard, VincentAix-Marseille University,INRA National Institute of Agricultural Research (author)
Ma, XingzhouNanjing Agricultural University (author)
Martynov, AlexanderSkolkovo Institute of Science and Technology (author)
Miller, Nicholas J.Illinois Institute of Technology (author)
Mitchell, Robert F.University of Wisconsin (author)
Munoz-Torres, MonicaLawrence Berkeley National Laboratory (author)
Muszewska, AnnaInstitute of Biochemistry and Biophysics of the Polish Academy of Sciences (author)
Oppert, BrendaUSDA-ARS Center for Grain and Animal Health Research (author)
Palli, Subba ReddyUniversity of Kentucky (author)
Panfilio, Kristen A.University of Warwick,University of Cologne (author)
Pauchet, YannickMax Planck Institute for Chemical Ecology (author)
Perkin, Lindsey C.USDA-ARS Center for Grain and Animal Health Research (author)
Petek, MarkoNational Institute of Biology Ljubljana (author)
Poelchau, Monica F.USDA-ARS National Agricultural Library (author)
Record, ÉricBiodiversité et Biotechnologie Fongiques (author)
Rinehart, Joseph P.USDA-ARS Insect Genetics and Biochemistry Research Unit (author)
Robertson, Hugh M.University of Illinois at Urbana-Champaign (author)
Rosendale, Andrew J.University of Cincinnati (author)
Ruiz-Arroyo, Victor M.University of Valencia (author)
Smagghe, GuyGhent University (author)
Szendrei, ZsofiaMichigan State University (author)
Thomas, Gregg W.C.Indiana University (author)
Torson, Alex S.North Dakota State University (author)
Vargas Jentzsch, Iris M.University of Cologne (author)
Weirauch, Matthew T.Cincinnati Children's Hospital Medical Center,University of Cincinnati (author)
Yates, Ashley D.Ohio State University (author)
Yocum, George D.USDA-ARS Insect Genetics and Biochemistry Research Unit (author)
Yoon, June SunUniversity of Kentucky (author)
Richards, StephenBaylor College of Medicine (author)
University of Wisconsin-MadisonUniversity of Vermont (creator_code:org_t)

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By the author/editor: Schoville, Sean ...; Chen, Yolanda H.; Andersson, Marti ...; Benoit, Joshua B ...; Bhandari, Anita; Bowsher, Julia H ...; show more...; Brevik, Kristian; Cappelle, Kaat; Chen, Mei Ju M.; Childers, Anna K ...; Childers, Christ ...; Christiaens, Oli ...; Clements, Justin; Didion, Elise M.; Elpidina, Elena ...; Engsontia, Patam ...; Friedrich, Marku ...; García-Robles, I ...; Gibbs, Richard A ...; Goswami, Chandan; Grapputo, Alessa ...; Gruden, Kristina; Grynberg, Marcin; Henrissat, Berna ...; Jennings, Emily ...; Jones, Jeffery W ...; Kalsi, Megha; Khan, Sher A.; Kumar, Abhishek; Li, Fei; Lombard, Vincent; Ma, Xingzhou; Martynov, Alexan ...; Miller, Nicholas ...; Mitchell, Robert ...; Munoz-Torres, Mo ...; Muszewska, Anna; Oppert, Brenda; Palli, Subba Red ...; Panfilio, Kriste ...; Pauchet, Yannick; Perkin, Lindsey ...; Petek, Marko; Poelchau, Monica ...; Record, Éric; Rinehart, Joseph ...; Robertson, Hugh ...; Rosendale, Andre ...; Ruiz-Arroyo, Vic ...; Smagghe, Guy; Szendrei, Zsofia; Thomas, Gregg W. ...; Torson, Alex S.; Vargas Jentzsch, ...; Weirauch, Matthe ...; Yates, Ashley D.; Yocum, George D.; Yoon, June Sun; Richards, Stephe ...; show less...

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