The discovery, distribution, and diversity of DNA viruses associated with Drosophila melanogaster in Europe

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The discovery, distribution, and diversity of DNA viruses associated with Drosophila melanogaster in Europe

Wallace, Megan A. (author): The European Drosophila Population Genomics Consortium (DrosEU),University of Edinburgh

Coffman, Kelsey A. (author): University of Georgia

Gilbert, Clément (author): The European Drosophila Population Genomics Consortium (DrosEU),University of Paris-Saclay

Ravindran, Sanjana (author): University of Edinburgh

Albery, Gregory F. (author): Georgetown University

Abbott, Jessica (author): Lund University,Lunds universitet,Evolutionär ekologi,Biologiska institutionen,Naturvetenskapliga fakulteten,Evolutionary ecology,Department of Biology,Faculty of Science,The European Drosophila Population Genomics Consortium (DrosEU)

Argyridou, Eliza (author): The European Drosophila Population Genomics Consortium (DrosEU),Ludwig-Maximilian University of Munich

Bellosta, Paola (author): The European Drosophila Population Genomics Consortium (DrosEU),University of Trento,NYU Langone

Betancourt, Andrea J. (author): University of Liverpool,The European Drosophila Population Genomics Consortium (DrosEU)

Colinet, Hervé (author): The European Drosophila Population Genomics Consortium (DrosEU),University of Rennes I

Eric, Katarina (author): The European Drosophila Population Genomics Consortium (DrosEU),University of Belgrade

Glaser-Schmitt, Amanda (author): The European Drosophila Population Genomics Consortium (DrosEU),Ludwig-Maximilian University of Munich

Grath, Sonja (author): The European Drosophila Population Genomics Consortium (DrosEU),Ludwig-Maximilian University of Munich

Jelic, Mihailo (author): University of Belgrade,The European Drosophila Population Genomics Consortium (DrosEU)

Kankare, Maaria (author): University of Jyväskylä,The European Drosophila Population Genomics Consortium (DrosEU)

Kozeretska, Iryna (author): The European Drosophila Population Genomics Consortium (DrosEU),National Antarctic Scientific Centre of Ministry of Education and Science of Ukraine

Loeschcke, Volker (author): The European Drosophila Population Genomics Consortium (DrosEU),Aarhus University

Montchamp-Moreau, Catherine (author): University of Paris-Saclay,The European Drosophila Population Genomics Consortium (DrosEU)

Ometto, Lino (author): The European Drosophila Population Genomics Consortium (DrosEU),University of Pavia

Onder, Banu Sebnem (author): Hacettepe University,The European Drosophila Population Genomics Consortium (DrosEU)

Orengo, Dorcas J. (author): University of Barcelona,The European Drosophila Population Genomics Consortium (DrosEU)

Parsch, John (author): The European Drosophila Population Genomics Consortium (DrosEU),Ludwig-Maximilian University of Munich

Pascual, Marta (author): The European Drosophila Population Genomics Consortium (DrosEU),University of Barcelona

Patenkovic, Aleksandra (author): University of Belgrade,The European Drosophila Population Genomics Consortium (DrosEU)

Puerma, Eva (author): The European Drosophila Population Genomics Consortium (DrosEU),University of Barcelona

Ritchie, Michael G. (author): University of St Andrews,The European Drosophila Population Genomics Consortium (DrosEU)

Rota-Stabelli, Omar (author): University of Trento,Edmund Mach Foundation,The European Drosophila Population Genomics Consortium (DrosEU)

Schou, Mads Fristrup (author): Lund University,Lunds universitet,MEMEG,Biologiska institutionen,Naturvetenskapliga fakulteten,Department of Biology,Faculty of Science,Aarhus University,The European Drosophila Population Genomics Consortium (DrosEU)

Serga, Svitlana V. (author): The European Drosophila Population Genomics Consortium (DrosEU),National Antarctic Scientific Centre of Ministry of Education and Science of Ukraine,Taras Shevchenko National University of Kyiv

Stamenkovic-Radak, Marina (author): The European Drosophila Population Genomics Consortium (DrosEU),University of Belgrade

Tanaskovic, Marija (author): University of Belgrade,The European Drosophila Population Genomics Consortium (DrosEU)

Veselinovic, Marija Savic (author): The European Drosophila Population Genomics Consortium (DrosEU),University of Belgrade

Vieira, Jorge (author): The European Drosophila Population Genomics Consortium (DrosEU),Institute for Molecular and Cell Biology,University of Porto

Vieira, Cristina P. (author): University of Porto,The European Drosophila Population Genomics Consortium (DrosEU),Institute for Molecular and Cell Biology

Kapun, Martin (author): University of Zurich,The European Drosophila Population Genomics Consortium (DrosEU),Medical University of Vienna

Flatt, Thomas (author): The European Drosophila Population Genomics Consortium (DrosEU),University of Fribourg

González, Josefa (author): Institute of Evolutionary Biology,The European Drosophila Population Genomics Consortium (DrosEU)

Staubach, Fabian (author): Albert-Ludwigs University Freiburg,The European Drosophila Population Genomics Consortium (DrosEU)

Obbard, Darren J. (author): The European Drosophila Population Genomics Consortium (DrosEU),University of Edinburgh

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(creator_code:org_t)

2021-04-01
2021
English.
In: Virus Evolution. - : Oxford University Press (OUP). - 2057-1577. ; 7:1

Related links:: http://dx.doi.org/10... (free); show more...; https://academic.oup...; https://lup.lub.lu.s...; https://doi.org/10.1...; show less...

Journal article (peer-reviewed)

Abstract Subject headings

Drosophila melanogaster is an important model for antiviral immunity in arthropods, but very few DNA viruses have been described from the family Drosophilidae. This deficiency limits our opportunity to use natural host-pathogen combinations in experimental studies, and may bias our understanding of the Drosophila virome. Here, we report fourteen DNA viruses detected in a metagenomic analysis of 6668 pool-sequenced Drosophila, sampled from forty-seven European locations between 2014 and 2016. These include three new nudiviruses, a new and divergent entomopoxvirus, a virus related to Leptopilina boulardi filamentous virus, and a virus related to Musca domestica salivary gland hypertrophy virus. We also find an endogenous genomic copy of galbut virus, a double-stranded RNA partitivirus, segregating at very low frequency. Remarkably, we find that Drosophila Vesanto virus, a small DNA virus previously described as a bidnavirus, may be composed of up to twelve segments and thus represent a new lineage of segmented DNA viruses. Two of the DNA viruses, Drosophila Kallithea nudivirus and Drosophila Vesanto virus are relatively common, found in 2 per cent or more of wild flies. The others are rare, with many likely to be represented by a single infected fly. We find that virus prevalence in Europe reflects the prevalence seen in publicly available datasets, with Drosophila Kallithea nudivirus and Drosophila Vesanto virus the only ones commonly detectable in public data from wild-caught flies and large population cages, and the other viruses being rare or absent. These analyses suggest that DNA viruses are at lower prevalence than RNA viruses in D.melanogaster, and may be less likely to persist in laboratory cultures. Our findings go some way to redressing an earlier bias toward RNA virus studies in Drosophila, and lay the foundation needed to harness the power of Drosophila as a model system for the study of DNA viruses.

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By the author/editor: Wallace, Megan A ...; Coffman, Kelsey ...; Gilbert, Clément; Ravindran, Sanja ...; Albery, Gregory ...; Abbott, Jessica; show more...; Argyridou, Eliza; Bellosta, Paola; Betancourt, Andr ...; Colinet, Hervé; Eric, Katarina; Glaser-Schmitt, ...; Grath, Sonja; Jelic, Mihailo; Kankare, Maaria; Kozeretska, Iryn ...; Loeschcke, Volke ...; Montchamp-Moreau ...; Ometto, Lino; Onder, Banu Sebn ...; Orengo, Dorcas J ...; Parsch, John; Pascual, Marta; Patenkovic, Alek ...; Puerma, Eva; Ritchie, Michael ...; Rota-Stabelli, O ...; Schou, Mads Fris ...; Serga, Svitlana ...; Stamenkovic-Rada ...; Tanaskovic, Mari ...; Veselinovic, Mar ...; Vieira, Jorge; Vieira, Cristina ...; Kapun, Martin; Flatt, Thomas; González, Josefa; Staubach, Fabian; Obbard, Darren J ...; show less...

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NATURAL SCIENCES: NATURAL SCIENCES; and Biological Scien ...; and Zoology

Articles in the publication: Virus Evolution

By the university: Lund University

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The discovery, distribution, and diversity of DNA viruses associated with Drosophila melanogaster in Europe

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