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Butler enables rapi...
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Yakneen, SEuropean Molecular Biology Laboratory Heidelberg
(author)
Butler enables rapid cloud-based analysis of thousands of human genomes
- Article/chapterEnglish2020
Publisher, publication year, extent ...
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2020-02-05
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Springer Science and Business Media LLC,2020
Numbers
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LIBRIS-ID:oai:prod.swepub.kib.ki.se:142934233
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http://kipublications.ki.se/Default.aspx?queryparsed=id:142934233URI
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https://doi.org/10.1038/s41587-019-0360-3DOI
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https://lup.lub.lu.se/record/937aa1b1-6488-4110-90c0-09f638a5ec5aURI
Supplementary language notes
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Language:English
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Summary in:English
Part of subdatabase
Classification
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Subject category:ref swepub-contenttype
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Subject category:art swepub-publicationtype
Notes
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We present Butler, a computational tool that facilitates large-scale genomic analyses on public and academic clouds. Butler includes innovative anomaly detection and self-healing functions that improve the efficiency of data processing and analysis by 43% compared with current approaches. Butler enabled processing of a 725-terabyte cancer genome dataset from the Pan-Cancer Analysis of Whole Genomes (PCAWG) project in a time-efficient and uniform manner.
Subject headings and genre
Added entries (persons, corporate bodies, meetings, titles ...)
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Waszak, SMEuropean Molecular Biology Laboratory Heidelberg
(author)
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Gertz, MHeidelberg University
(author)
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Korbel, JOEuropean Molecular Biology Laboratory Heidelberg
(author)
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Aminou, B
(author)
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Bartolome, J
(author)
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Boroevich, KA
(author)
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Boyce, R
(author)
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Brooks, AN
(author)
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Buchanan, A
(author)
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Buchhalter, I
(author)
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Butler, AP
(author)
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Byrne, NJ
(author)
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Cafferkey, A
(author)
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Campbell, PJ
(author)
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Chen, ZH
(author)
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Cho, S
(author)
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Choi, W
(author)
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Clapham, P
(author)
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Davis-Dusenbery, BN
(author)
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De La Vega, FM
(author)
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Demeulemeester, J
(author)
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Dow, MT
(author)
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Dursi, LJ
(author)
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Eils, J
(author)
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Eils, R
(author)
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Ellrott, K
(author)
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Farcas, C
(author)
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Favero, F
(author)
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Fayzullaev, N
(author)
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Ferretti, V
(author)
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Flicek, P
(author)
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Fonseca, NA
(author)
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Gelpi, JL
(author)
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Getz, G
(author)
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Gibson, B
(author)
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Grossman, RL
(author)
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Harismendy, O
(author)
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Heath, AP
(author)
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Heinold, MC
(author)
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Hess, JM
(author)
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Hofmann, O
(author)
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Hong, JH
(author)
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Hudson, TJ
(author)
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Hutter, B
(author)
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Hutter, CM
(author)
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Hubschmann, D
(author)
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Imoto, S
(author)
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Ivkovic, S
(author)
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Jeon, SH
(author)
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Jiao, W
(author)
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Jung, J
(author)
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Kabbe, R
(author)
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Kahles, A
(author)
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Kerssemakers, JNA
(author)
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Kim, HL
(author)
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Kim, H
(author)
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Kim, J
(author)
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Kim, Y
(author)
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Kleinheinz, K
(author)
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Koscher, M
(author)
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Koures, A
(author)
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Kovacevic, M
(author)
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Lawerenz, C
(author)
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Leshchiner, I
(author)
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Liu, J
(author)
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Livitz, D
(author)
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Mihaiescu, GL
(author)
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Mijalkovic, S
(author)
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Lazic, AM
(author)
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Miyano, S
(author)
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Miyoshi, N
(author)
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Nahal-Bose, HK
(author)
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Nakagawa, H
(author)
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Nastic, M
(author)
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Staaf, JohanLund University,Lunds universitet,Avdelningen för translationell cancerforskning,Institutionen för laboratoriemedicin,Medicinska fakulteten,Forskningsgrupp Lungcancer,Forskargrupper vid Lunds universitet,LUCC: Lunds universitets cancercentrum,Övriga starka forskningsmiljöer,Bröst/lungcancer,Sektion I,Institutionen för kliniska vetenskaper, Lund,Division of Translational Cancer Research,Department of Laboratory Medicine,Faculty of Medicine,Research Group Lung Cancer,Lund University Research Groups,LUCC: Lund University Cancer Centre,Other Strong Research Environments,Breast/lungcancer,Section I,Department of Clinical Sciences, Lund(Swepub:lu)onk-jst
(author)
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Nicholson, J
(author)
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O'Connor, BD
(author)
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Ocana, D
(author)
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Ohi, K
(author)
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Ohno-Machado, L
(author)
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Omberg, L
(author)
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Ouellette, BFF
(author)
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Paramasivam, N
(author)
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Perry, MD
(author)
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Pihl, TD
(author)
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Prinz, M
(author)
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Puiggros, M
(author)
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Radovic, P
(author)
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Raine, KM
(author)
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Rheinbay, E
(author)
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Rosenberg, M
(author)
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Royo, R
(author)
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Ratsch, G
(author)
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Saksena, G
(author)
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Schlesner, M
(author)
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Shorser, SI
(author)
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Short, C
(author)
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Sofia, HJ
(author)
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Spring, J
(author)
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Stein, LD
(author)
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Struck, AJ
(author)
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Tiao, G
(author)
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Tijanic, N
(author)
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Torrents, D
(author)
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Van Loo, P
(author)
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Vazquez, M
(author)
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Vicente, D
(author)
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Wala, JA
(author)
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Wang, ZN
(author)
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Weischenfeldt, J
(author)
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Werner, J
(author)
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Williams, A
(author)
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Woo, Y
(author)
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Wright, AJ
(author)
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Xiang, Q
(author)
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Yang, LM
(author)
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Yuen, D
(author)
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Yung, CK
(author)
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Zhang, JJ
(author)
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Borg, ÅkeLund University,Lunds universitet,Bröstcancer-genetik,Sektion I,Institutionen för kliniska vetenskaper, Lund,Medicinska fakulteten,Familjär bröstcancer,Forskargrupper vid Lunds universitet,LUCC: Lunds universitets cancercentrum,Övriga starka forskningsmiljöer,Breastcancer-genetics,Section I,Department of Clinical Sciences, Lund,Faculty of Medicine,Familial Breast Cancer,Lund University Research Groups,LUCC: Lund University Cancer Centre,Other Strong Research Environments(Swepub:lu)onk-abo
(creator_code:cre_t)
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Ringnér, MarkusLund University,Lunds universitet,Molekylär cellbiologi,Biologiska institutionen,Naturvetenskapliga fakulteten,Molecular Cell Biology,Department of Biology,Faculty of Science(Swepub:lu)thep-mri
(creator_code:cre_t)
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European Molecular Biology Laboratory HeidelbergHeidelberg University
(creator_code:org_t)
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In:Nature biotechnology: Springer Science and Business Media LLC38:3, s. 288-+1546-16961087-0156
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- By the author/editor
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Yakneen, S
-
Waszak, SM
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Gertz, M
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Korbel, JO
-
Aminou, B
-
Bartolome, J
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Boroevich, KA
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Boyce, R
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Brooks, AN
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Buchanan, A
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Buchhalter, I
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Butler, AP
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Byrne, NJ
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Cafferkey, A
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Campbell, PJ
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Chen, ZH
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Cho, S
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Choi, W
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Clapham, P
-
Davis-Dusenbery, ...
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De La Vega, FM
-
Demeulemeester, ...
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Dow, MT
-
Dursi, LJ
-
Eils, J
-
Eils, R
-
Ellrott, K
-
Farcas, C
-
Favero, F
-
Fayzullaev, N
-
Ferretti, V
-
Flicek, P
-
Fonseca, NA
-
Gelpi, JL
-
Getz, G
-
Gibson, B
-
Grossman, RL
-
Harismendy, O
-
Heath, AP
-
Heinold, MC
-
Hess, JM
-
Hofmann, O
-
Hong, JH
-
Hudson, TJ
-
Hutter, B
-
Hutter, CM
-
Hubschmann, D
-
Imoto, S
-
Ivkovic, S
-
Jeon, SH
-
Jiao, W
-
Jung, J
-
Kabbe, R
-
Kahles, A
-
Kerssemakers, JN ...
-
Kim, HL
-
Kim, H
-
Kim, J
-
Kim, Y
-
Kleinheinz, K
-
Koscher, M
-
Koures, A
-
Kovacevic, M
-
Lawerenz, C
-
Leshchiner, I
-
Liu, J
-
Livitz, D
-
Mihaiescu, GL
-
Mijalkovic, S
-
Lazic, AM
-
Miyano, S
-
Miyoshi, N
-
Nahal-Bose, HK
-
Nakagawa, H
-
Nastic, M
-
Staaf, Johan
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Nicholson, J
-
O'Connor, BD
-
Ocana, D
-
Ohi, K
-
Ohno-Machado, L
-
Omberg, L
-
Ouellette, BFF
-
Paramasivam, N
-
Perry, MD
-
Pihl, TD
-
Prinz, M
-
Puiggros, M
-
Radovic, P
-
Raine, KM
-
Rheinbay, E
-
Rosenberg, M
-
Royo, R
-
Ratsch, G
-
Saksena, G
-
Schlesner, M
-
Shorser, SI
-
Short, C
-
Sofia, HJ
-
Spring, J
-
Stein, LD
-
Struck, AJ
-
Tiao, G
-
Tijanic, N
-
Torrents, D
-
Van Loo, P
-
Vazquez, M
-
Vicente, D
-
Wala, JA
-
Wang, ZN
-
Weischenfeldt, J
-
Werner, J
-
Williams, A
-
Woo, Y
-
Wright, AJ
-
Xiang, Q
-
Yang, LM
-
Yuen, D
-
Yung, CK
-
Zhang, JJ
-
Borg, Åke
-
Ringnér, Markus
-
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Nature biotechno ...
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Karolinska Institutet
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