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LIBRIS Formathandbok  (Information om MARC21)
FältnamnIndikatorerMetadata
00002524naa a2200325 4500
001oai:prod.swepub.kib.ki.se:144282966
003SwePub
008240910s2020 | |||||||||||000 ||eng|
024a http://kipublications.ki.se/Default.aspx?queryparsed=id:1442829662 URI
024a https://doi.org/10.3390/biom100710342 DOI
040 a (SwePub)ki
041 a engb eng
042 9 SwePub
072 7a ref2 swepub-contenttype
072 7a art2 swepub-publicationtype
100a Kumar-Singh, A4 aut
2451 0a Mapping the Interactome of the Nuclear Heparan Sulfate Proteoglycan Syndecan-1 in Mesothelioma Cells
264 c 2020-07-11
264 1b MDPI AG,c 2020
520 a Syndecan-1 (SDC1) is a cell surface heparan sulfate proteoglycan (HSPG), which regulates various signaling pathways controlling the proliferation and migration of malignant mesothelioma and other types of cancer. We have previously shown that SDC1 can translocate to the nucleus in mesothelioma cells through a tubulin-dependent transport mechanism. However, the role of nuclear SDC1 is largely unknown. Here, we performed co-immunoprecipitation (Co-IP) of SDC1 in a mesothelioma cell line to identify SDC1 interacting proteins. The precipitates contained a large number of proteins, indicating the recovery of protein networks. Proteomic analysis with a focus on nuclear proteins revealed an association with pathways related to cell proliferation and RNA synthesis, splicing and transport. In support of this, the top RNA splicing candidates were verified to interact with SDC1 by Co-IP and subsequent Western blot analysis. Further loss- and gain-of-function experiments showed that SDC1 influences RNA levels in mesothelioma cells. The results identify a proteomic map of SDC1 nuclear interactors in a mesothelioma cell line and suggest a previously unknown role for SDC1 in RNA biogenesis. The results should serve as a fundament for further studies to discover the role of nuclear SDC1 in normal and cancer cells of different origin.
700a Shrinet, J4 aut
700a Parniewska, MM4 aut
700a Fuxe, Ju Karolinska Institutet4 aut
700a Dobra, Ku Karolinska Institutet4 aut
700a Hjerpe, A4 aut
710a Karolinska Institutet4 org
773t Biomoleculesd : MDPI AGg 10:7q 10:7x 2218-273X
856u https://www.mdpi.com/2218-273X/10/7/1034/pdf
8564 8u http://kipublications.ki.se/Default.aspx?queryparsed=id:144282966
8564 8u https://doi.org/10.3390/biom10071034

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By the author/editor
Kumar-Singh, A
Shrinet, J
Parniewska, MM
Fuxe, J
Dobra, K
Hjerpe, A
Articles in the publication
Biomolecules
By the university
Karolinska Institutet

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