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Mass spectrometry-b...
Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices
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- Alseekh, Saleh (author)
- Max Planck Gesellschaft zur Förderung der Wissenschaften e.V. (MPG),Max Planck Society for the Advancement of Science (MPG)
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- Aharoni, Asaph (author)
- Weizmann Institute of Science
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- Brotman, Yariv (author)
- Ben-Gurion University of the Negev
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- Contrepois, Kevin (author)
- Stanford University
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D'Auria, John (author)
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- Ewald, Jan (author)
- Friedrich-Schiller-Universität Jena,Friedrich Schiller University Jena
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- Ewald, Jennifer C. (author)
- Eberhard Karls Universität Tübingen,Eberhard Karls University of Tübingen
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- Fraser, Paul D. (author)
- Royal Holloway University of London
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- Giavalisco, Patrick (author)
- Max Planck Gesellschaft zur Förderung der Wissenschaften e.V. (MPG),Max Planck Society for the Advancement of Science (MPG)
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- Hall, Robert D. (author)
- Wageningen University and Research
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- Heinemann, Matthias (author)
- Rijksuniversiteit Groningen,University of Groningen
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Link, Hannes (author)
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- Luo, Jie (author)
- Hainan University
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- Neumann, Steffen (author)
- Leibniz Institut fur Pflanzenbiochemie,Leibniz Institute for Plant Biochemistry
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- Nielsen, Jens B, 1962 (author)
- Chalmers tekniska högskola,Chalmers University of Technology,BioInnovation Institute (BII)
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- de Souza, Leonardo Perez (author)
- Max Planck Gesellschaft zur Förderung der Wissenschaften e.V. (MPG),Max Planck Society for the Advancement of Science (MPG)
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- Saito, Kazuki (author)
- RIKEN,Chiba University
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- Sauer, Uwe (author)
- Eidgenössische Technische Hochschule Zürich (ETH),Swiss Federal Institute of Technology in Zürich (ETH)
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- Schroeder, Frank C. (author)
- Cornell University
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- Schuster, Stefan (author)
- Friedrich-Schiller-Universität Jena,Friedrich Schiller University Jena
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- Siuzdak, Gary (author)
- Scripps Research Institute
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- Skirycz, Aleksandra (author)
- Cornell University,Max Planck Gesellschaft zur Förderung der Wissenschaften e.V. (MPG),Max Planck Society for the Advancement of Science (MPG)
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- Sumner, Lloyd W. (author)
- University of Missouri
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- Snyder, Michael P. (author)
- Stanford University
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- Tang, Huiru (author)
- Fudan University
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- Tohge, Takayuki (author)
- Nara Institute of Science and Technology
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- Wang, Yulan (author)
- Nanyang Technological University
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- Wen, Weiwei (author)
- Huazhong Agricultural University
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- Wu, Si (author)
- Stanford University
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- Xu, Guowang (author)
- Chinese Academy of Sciences
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- Zamboni, Nicola (author)
- Eidgenössische Technische Hochschule Zürich (ETH),Swiss Federal Institute of Technology in Zürich (ETH)
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- Fernie, Alisdair R. (author)
- Max Planck Gesellschaft zur Förderung der Wissenschaften e.V. (MPG),Max Planck Society for the Advancement of Science (MPG)
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Max Planck Gesellschaft zur Förderung der Wissenschaften eV. (MPG) Weizmann Institute of Science (creator_code:org_t)
- 2021-07-08
- 2021
- English.
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In: Nature Methods. - : Springer Science and Business Media LLC. - 1548-7091 .- 1548-7105. ; 18:7, s. 747-756
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Abstract
Subject headings
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- This Perspective, from a large group of metabolomics experts, provides best practices and simplified reporting guidelines for practitioners of liquid chromatography- and gas chromatography-mass spectrometry-based metabolomics. Mass spectrometry-based metabolomics approaches can enable detection and quantification of many thousands of metabolite features simultaneously. However, compound identification and reliable quantification are greatly complicated owing to the chemical complexity and dynamic range of the metabolome. Simultaneous quantification of many metabolites within complex mixtures can additionally be complicated by ion suppression, fragmentation and the presence of isomers. Here we present guidelines covering sample preparation, replication and randomization, quantification, recovery and recombination, ion suppression and peak misidentification, as a means to enable high-quality reporting of liquid chromatography- and gas chromatography-mass spectrometry-based metabolomics-derived data.
Subject headings
- NATURVETENSKAP -- Biologi -- Cellbiologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Cell Biology (hsv//eng)
- NATURVETENSKAP -- Kemi -- Analytisk kemi (hsv//swe)
- NATURAL SCIENCES -- Chemical Sciences -- Analytical Chemistry (hsv//eng)
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- By the author/editor
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Alseekh, Saleh
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Aharoni, Asaph
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Brotman, Yariv
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Contrepois, Kevi ...
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D'Auria, John
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Ewald, Jan
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show more...
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Ewald, Jennifer ...
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Fraser, Paul D.
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Giavalisco, Patr ...
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Hall, Robert D.
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Heinemann, Matth ...
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Link, Hannes
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Luo, Jie
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Neumann, Steffen
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Nielsen, Jens B, ...
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de Souza, Leonar ...
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Saito, Kazuki
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Sauer, Uwe
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Schroeder, Frank ...
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Schuster, Stefan
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Siuzdak, Gary
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Skirycz, Aleksan ...
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Sumner, Lloyd W.
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Snyder, Michael ...
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Tang, Huiru
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Tohge, Takayuki
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Wang, Yulan
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Wen, Weiwei
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Wu, Si
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Xu, Guowang
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Zamboni, Nicola
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Fernie, Alisdair ...
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- About the subject
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Biological Scien ...
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and Cell Biology
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- NATURAL SCIENCES
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NATURAL SCIENCES
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and Chemical Science ...
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and Analytical Chemi ...
- Articles in the publication
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Nature Methods
- By the university
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Chalmers University of Technology