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A comprehensive res...
A comprehensive resource for retrieving, visualizing, and integrating functional genomics data
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- Blum, Matthias (author)
- IGBMC Institut de Genetique et de Biologie Moleculaire et Cellulaire,European Bioinformatics Institute
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- Cholley, Pierre-Etienne, 1984 (author)
- IGBMC Institut de Genetique et de Biologie Moleculaire et Cellulaire,Chalmers tekniska högskola,Chalmers University of Technology
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- Malysheva, Valeriya (author)
- Imperial College of Science, Technology and Medicine,IGBMC Institut de Genetique et de Biologie Moleculaire et Cellulaire,Medical Research Council
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- Nicaise, Samuel (author)
- IGBMC Institut de Genetique et de Biologie Moleculaire et Cellulaire
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- Moehlin, Julien (author)
- IGBMC Institut de Genetique et de Biologie Moleculaire et Cellulaire,Université d'Évry Val-d'Essonne,University of Évry Val d'Essonne
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- Gronemeyer, Hinrich (author)
- Inserm Transfert SA,Université de Strasbourg,University of Strasbourg,Centre national de la recherche scientifique (CNRS),IGBMC Institut de Genetique et de Biologie Moleculaire et Cellulaire
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- Mendoza-Parra, Marco Antonio (author)
- Université d'Évry Val-d'Essonne,University of Évry Val d'Essonne,IGBMC Institut de Genetique et de Biologie Moleculaire et Cellulaire,Centre national de la recherche scientifique (CNRS)
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(creator_code:org_t)
- 2019-12-09
- 2020
- English.
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In: Life Science Alliance. - : Life Science Alliance, LLC. - 2575-1077. ; 3:1
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Abstract
Subject headings
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- The enormous amount of freely accessible functional genomics data is an invaluable resource for interrogating the biological function of multiple DNA-interacting players and chromatin modifications by large-scale comparative analyses. However, in practice, interrogating large collections of public data requires major efforts for (i) reprocessing available raw reads, (ii) incorporating quality assessments to exclude artefactual and low-quality data, and (iii) processing data by using high-performance computation. Here, we present qcGenomics, a user-friendly online resource for ultrafast retrieval, visualization, and comparative analysis of tens of thousands of genomics datasets to gain new functional insight from global or focused multidimensional data integration. © 2019 Blum et al.
Subject headings
- NATURVETENSKAP -- Data- och informationsvetenskap -- Annan data- och informationsvetenskap (hsv//swe)
- NATURAL SCIENCES -- Computer and Information Sciences -- Other Computer and Information Science (hsv//eng)
- NATURVETENSKAP -- Data- och informationsvetenskap -- Bioinformatik (hsv//swe)
- NATURAL SCIENCES -- Computer and Information Sciences -- Bioinformatics (hsv//eng)
- NATURVETENSKAP -- Biologi -- Bioinformatik och systembiologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Bioinformatics and Systems Biology (hsv//eng)
Publication and Content Type
- art (subject category)
- ref (subject category)
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