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  • Holt, CarsonDept Human Genet, Vienna, Austria;USTAR Ctr Genet Discovery, Vienna, Austria (author)

Improved Genome Assembly and Annotation for the Rock Pigeon (Columba livia)

  • Article/chapterEnglish2018

Publisher, publication year, extent ...

  • 2018-05-01
  • GENETICS SOCIETY AMERICA,2018
  • electronicrdacarrier

Numbers

  • LIBRIS-ID:oai:DiVA.org:uu-356315
  • https://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-356315URI
  • https://doi.org/10.1534/g3.117.300443DOI

Supplementary language notes

  • Language:English
  • Summary in:English

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Classification

  • Subject category:ref swepub-contenttype
  • Subject category:art swepub-publicationtype

Notes

  • The domestic rock pigeon (Columba livia) is among the most widely distributed and phenotypically diverse avian species. C. livia is broadly studied in ecology, genetics, physiology, behavior, and evolutionary biology, and has recently emerged as a model for understanding the molecular basis of anatomical diversity, the magnetic sense, and other key aspects of avian biology. Here we report an update to the C. livia genome reference assembly and gene annotation dataset. Greatly increased scaffold lengths in the updated reference assembly, along with an updated annotation set, provide improved tools for evolutionary and functional genetic studies of the pigeon, and for comparative avian genomics in general.

Subject headings and genre

Added entries (persons, corporate bodies, meetings, titles ...)

  • Campbell, MichaelDept Human Genet, Vienna, Austria;Cold Spring Harbor Lab, Div Plant Biol, POB 100, Cold Spring Harbor, NY 11724 USA (author)
  • Keays, David A.Res Inst Mol Pathol, Vienna, Austria (author)
  • Edelman, NathanielRes Inst Mol Pathol, Vienna, Austria;Harvard Univ, Dept Organism & Evolutionary Biol, Cambridge, MA 02138 USA (author)
  • Kapusta, AurelieDept Human Genet, Vienna, Austria;USTAR Ctr Genet Discovery, Vienna, Austria (author)
  • Maclary, EmilyUniv Utah, Dept Biol, 257 S 1400 E, Salt Lake City, UT 84108 USA (author)
  • Domyan, Eric T.Univ Utah, Dept Biol, 257 S 1400 E, Salt Lake City, UT 84108 USA;Utah Valley Univ, Dept Biol, Orem, UT USA (author)
  • Suh, AlexanderUppsala universitet,Evolutionsbiologi(Swepub:uu)alesu519 (author)
  • Warren, Wesley C.Washington Univ, Genome Inst, St Louis, MO USA (author)
  • Yandell, MarkDept Human Genet, Vienna, Austria;USTAR Ctr Genet Discovery, Vienna, Austria (author)
  • Gilbert, M. Thomas P.Univ Copenhagen, Nat Hist Museum Denmark, Copenhagen, Denmark;Norwegian Univ Sci & Technol, Univ Museum, Trondheim, Norway (author)
  • Shapiro, Michael D.Univ Utah, Dept Biol, 257 S 1400 E, Salt Lake City, UT 84108 USA (author)
  • Dept Human Genet, Vienna, Austria;USTAR Ctr Genet Discovery, Vienna, AustriaDept Human Genet, Vienna, Austria;Cold Spring Harbor Lab, Div Plant Biol, POB 100, Cold Spring Harbor, NY 11724 USA (creator_code:org_t)

Related titles

  • In:G3: GENETICS SOCIETY AMERICA8:5, s. 1391-13982160-1836

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