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Interpretation of t...
Interpretation of the DOME Recommendations for Machine Learning in Proteomics and Metabolomics
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- Palmblad, Magnus (författare)
- Leiden Univ, Ctr Prote & Metabol, Med Ctr, NL-2300 RC Leiden, Netherlands.
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- Boecker, Sebastian (författare)
- Friedrich Schiller Univ, Fac Math & Comp Sci, D-07743 Jena, Germany.
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- Degroeve, Sven (författare)
- VIB, VIB UGent Ctr Med Biotechnol, Ghent, Belgium.;Univ Ghent, Dept Biomol Med, B-9052 Ghent, Belgium.
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- Kohlbacher, Oliver (författare)
- Eberhard Karls Univ Tubingen, WSI ZBIT, D-72076 Tubingen, Germany.
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- Käll, Lukas, 1969- (författare)
- KTH,Science for Life Laboratory, SciLifeLab,Genteknologi
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- Noble, William Stafford (författare)
- Univ Washington, Dept Genome Sci, Seattle, WA 98195 USA.;Univ Washington, Paul G Allen Sch Comp Sci & Engn, Seattle, WA 98195 USA.
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- Wilhelm, Mathias (författare)
- Tech Univ Munich TUM, Computat Mass Spectrometry, D-85354 Freising Weihenstephan, Germany.
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Leiden Univ, Ctr Prote & Metabol, Med Ctr, NL-2300 RC Leiden, Netherlands Friedrich Schiller Univ, Fac Math & Comp Sci, D-07743 Jena, Germany. (creator_code:org_t)
- 2022-02-04
- 2022
- Engelska.
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Ingår i: Journal of Proteome Research. - : American Chemical Society (ACS). - 1535-3893 .- 1535-3907. ; 21:4, s. 1204-1207
- Relaterad länk:
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https://doi.org/10.1...
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https://pubs.acs.org...
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https://urn.kb.se/re...
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https://doi.org/10.1...
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Abstract
Ämnesord
Stäng
- Machine learning is increasingly applied in proteomics and metabolomics to predict molecular structure, function, and physicochemical properties, including behavior in chromatography, ion mobility, and tandem mass spectrometry. These must be described in sufficient detail to apply or evaluate the performance of trained models. Here we look at and interpret the recently published and general DOME (Data, Optimization, Model, Evaluation) recommendations for conducting and reporting on machine learning in the specific context of proteomics and metabolomics.
Ämnesord
- NATURVETENSKAP -- Kemi -- Analytisk kemi (hsv//swe)
- NATURAL SCIENCES -- Chemical Sciences -- Analytical Chemistry (hsv//eng)
- NATURVETENSKAP -- Biologi -- Biokemi och molekylärbiologi (hsv//swe)
- NATURAL SCIENCES -- Biological Sciences -- Biochemistry and Molecular Biology (hsv//eng)
- NATURVETENSKAP -- Data- och informationsvetenskap -- Bioinformatik (hsv//swe)
- NATURAL SCIENCES -- Computer and Information Sciences -- Bioinformatics (hsv//eng)
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