| 1. |
- Berger, Stella A., et al.
(författare)
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Separating effects of climatic drivers and biotic feedbacks on seasonal plankton dynamics : no sign of trophic mismatch
- 2014
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Ingår i: Freshwater Biology. - : Wiley. - 0046-5070 .- 1365-2427. ; 59:10, s. 2204-2220
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Tidskriftsartikel (refereegranskat)abstract
- Climate change may impact most strongly on temperate lake plankton communities in spring, when light availability and water temperature change rapidly due to thermal stratification. Effects of changing light and temperature on one food-web component transfer to other components, producing a complex interplay between physical drivers and biotic feedbacks. Understanding this interplay is important, because altered climate regimes could result in phenological mismatch between the phytoplankton spring bloom and the timing of maximum food requirements of grazers. To separate direct effects of light and temperature on spring plankton dynamics from effects mediated through micro- and mesograzer feedbacks, we manipulated water temperature, stratification depth and presence/absence of the mesograzer Daphnia in lake mesocosms. In early spring, stratification depth and water temperature directly influenced the light supply to phytoplankton and the growth rates of all plankton groups. Subsequently, indirect effects, including light-dependent food supply to grazers and temperature-dependent grazing pressure, became increasingly important. Phytoplankton and Daphnia peaked earlier in warmer treatments and reached higher peaks when stratification depth was shallower. Ciliates responded positively to increased food density and higher temperature and subsequently affected the taxonomic composition, but not the total biomass, of phytoplankton. In the absence of Daphnia, phytoplankton did not enter a distinct clear water phase. When present, Daphnia caused an extended clear water phase, maintaining phytoplankton and ciliates at low levels throughout early summer and suppressing all direct effects of physical drivers on these plankton groups. Our Daphnia treatments mimicked the high and low fish predation settings of the largely descriptive, recently revised Plankton Ecology Group (PEG) model of seasonal plankton succession and explored their responses to climate change scenarios. The results largely support the PEG model, but attribute greater importance to early season temperature effects and later season grazing effects of Daphnia. In warmer treatments, the timing of phytoplankton and zooplankton peaks tended to be more closely coupled, and temperature did not affect the height of zooplankton peaks. In line with other experiments, these results do not support the widely held concern that warming may create a trophic mismatch between phytoplankton and zooplankton and reduce spring zooplankton production.
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| 2. |
- Hansson, Björn, et al.
(författare)
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Adipose cell size changes are associated with a drastic actin remodeling
- 2019
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Ingår i: Scientific Reports. - : Springer Science and Business Media LLC. - 2045-2322. ; 9:1
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Tidskriftsartikel (refereegranskat)abstract
- Adipose tissue plays a major role in regulating whole-body insulin sensitivity and energy metabolism. To accommodate surplus energy, the tissue rapidly expands by increasing adipose cell size (hypertrophy) and cell number (hyperplasia). Previous studies have shown that enlarged, hypertrophic adipocytes are less responsive to insulin, and that adipocyte size could serve as a predictor for the development of type 2 diabetes. In the present study, we demonstrate that changes in adipocyte size correlate with a drastic remodeling of the actin cytoskeleton. Expansion of primary adipocytes following 2 weeks of high-fat diet (HFD)-feeding in C57BL6/J mice was associated with a drastic increase in filamentous (F)-actin as assessed by fluorescence microscopy, increased Rho-kinase activity, and changed expression of actin-regulating proteins, favoring actin polymerization. At the same time, increased cell size was associated with impaired insulin response, while the interaction between the cytoskeletal scaffolding protein IQGAP1 and insulin receptor substrate (IRS)-1 remained intact. Reversed feeding from HFD to chow restored cell size, insulin response, expression of actin-regulatory proteins and decreased the amount of F-actin filaments. Together, we report a drastic cytoskeletal remodeling during adipocyte expansion, a process which could contribute to deteriorating adipocyte function.
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| 3. |
- Kraus, Stefan, et al.
(författare)
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Planet Formation Imager (PFI) : Science vision and key requirements
- 2016
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Ingår i: Optical and Infrared Interferometry and Imaging V. - : SPIE. - 9781510601932 ; 9907
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Konferensbidrag (refereegranskat)abstract
- The Planet Formation Imager (PFI) project aims to provide a strong scientific vision for ground-based optical astronomy beyond the upcoming generation of Extremely Large Telescopes. We make the case that a breakthrough in angular resolution imaging capabilities is required in order to unravel the processes involved in planet formation. PFI will be optimised to provide a complete census of the protoplanet population at all stellocentric radii and over the age range from 0.1 to ∼100 Myr. Within this age period, planetary systems undergo dramatic changes and the final architecture of planetary systems is determined. Our goal is to study the planetary birth on the natural spatial scale where the material is assembled, which is the "Hill Sphere" of the forming planet, and to characterise the protoplanetary cores by measuring their masses and physical properties. Our science working group has investigated the observational characteristics of these young protoplanets as well as the migration mechanisms that might alter the system architecture. We simulated the imprints that the planets leave in the disk and study how PFI could revolutionise areas ranging from exoplanet to extragalactic science. In this contribution we outline the key science drivers of PFI and discuss the requirements that will guide the technology choices, the site selection, and potential science/technology tradeoffs.
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| 4. |
- Sebastian, Patrizia, et al.
(författare)
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Effects of water temperature and mixed layer depth on zooplankton body size
- 2012
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Ingår i: Marine Biology. - : Springer Science and Business Media LLC. - 0025-3162 .- 1432-1793. ; 159:11, s. 2431-2440
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Tidskriftsartikel (refereegranskat)abstract
- Ecological consequences of global warming include shifts of species ranges toward higher altitudes and latitudes as well as temporal shifts in phenology and life-cycle events. Evidence is accumulating that increasing temperature is also linked to reduced body size of ectotherms. While temperature can act directly on body size, it may also act indirectly by affecting the timing of life-cycle events and the resulting population age and size structure, especially in seasonal environments. Population structure may, in turn, be influenced by temperature-driven changes in resource availability. In a field mesocosm experiment, we investigated how water temperature and mixed surface layer depth (a temperature-dependent determinant of light availability to phytoplankton) affected population dynamics, population age and size structure, and individual size at stage (size at first reproduction) of Daphnia hyalina during and after a phytoplankton spring bloom. Mixed layer depth was inversely related to the magnitudes of the phytoplankton spring bloom and the subsequent Daphnia peak, but had no effect on the body size of Daphnia. Conversely, temperature had no effects on abundance peaks but strongly affected the timing of these events. This resulted in at times positive, at other times negative, transient effects of temperature on mean body size, caused by asynchronous changes in population size structure in cold versus warm treatments. In contrast to mean body size, individual size at stage consistently decreased with increasing temperature. We suggest that size at stage could be used as an unbiased response parameter to temperature that is unaffected by transient, demographically driven changes in population size structure.
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| 5. |
- Aamer, Aysha, et al.
(författare)
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A precursor plateau and pre-maximum [O ii] emission in the superluminous SN2019szu : a pulsational pair-instability candidate
- 2023
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Ingår i: Monthly notices of the Royal Astronomical Society. - 0035-8711 .- 1365-2966. ; 527:4, s. 11970-11995
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Tidskriftsartikel (refereegranskat)abstract
- We present a detailed study on SN2019szu, a Type I superluminous supernova at z = 0.213 that displayed unique photometric and spectroscopic properties. Pan-STARRS and ZTF forced photometry show a pre-explosion plateau lasting ∼40 d. Unlike other SLSNe that show decreasing photospheric temperatures with time, the optical colours show an apparent temperature increase from ∼15 000 to ∼20 000 K over the first 70 d, likely caused by an additional pseudo-continuum in the spectrum. Remarkably, the spectrum displays a forbidden emission line (likely attributed to λλ7320,7330) visible 16 d before maximum light, inconsistent with an apparently compact photosphere. This identification is further strengthened by the appearances of [O III] λλ4959, 5007, and [O III] λ4363 seen in the spectrum. Comparing with nebular spectral models, we find that the oxygen line fluxes and ratios can be reproduced with ∼0.25 M⊙ of oxygen-rich material with a density of ∼10−15 g cm−3. The low density suggests a circumstellar origin, but the early onset of the emission lines requires that this material was ejected within the final months before the terminal explosion, consistent with the timing of the precursor plateau. Interaction with denser material closer to the explosion likely produced the pseudo-continuum bluewards of ∼5500 Å. We suggest that this event is one of the best candidates to date for a pulsational pair-instability ejection, with early pulses providing the low density material needed for the formation of the forbidden emission line, and collisions between the final shells of ejected material producing the pre-explosion plateau.
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| 6. |
- Arganda-Carreras, Ignacio, et al.
(författare)
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Crowdsourcing the creation of image segmentation algorithms for connectomics
- 2015
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Ingår i: Frontiers in Neuroanatomy. - : Frontiers Media S.A.. - 1662-5129. ; 9:142
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Tidskriftsartikel (refereegranskat)abstract
- To stimulate progress in automating the reconstruction of neural circuits, we organized the first international challenge on 2D segmentation of electron microscopic (EM) images of the brain. Participants submitted boundary maps predicted for a test set of images, and were scored based on their agreement with a consensus of human expert annotations. The winning team had no prior experience with EM images, and employed a convolutional network. This "deep learning" approach has since become accepted as a standard for segmentation of FM images. The challenge has continued to accept submissions, and the best so far has resulted from cooperation between two teams. The challenge has probably saturated, as algorithms cannot progress beyond limits set by ambiguities inherent in 2D scoring and the size of the test dataset. Retrospective evaluation of the challenge scoring system reveals that it was not sufficiently robust to variations in the widths of neurite borders. We propose a solution to this problem, which should be useful for a future 3D segmentation challenge.
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| 7. |
- Berger, Christian, 1980, et al.
(författare)
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Constructive Requirements Modeling - More Reliable Implementations in a Shorter Time
- 2012
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Ingår i: Lecture Notes in Informatics. - 1617-5468. - 9783885796046 ; P-210, s. 149-162
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Konferensbidrag (refereegranskat)abstract
- Requirements engineering is nowadays the broadly accepted method to manage a customer’s requirements. The result is a specification from which a solution is implemented and which is used to validate the realization in terms of their fulfillment. However, today’s tools assist in organizing and tracking the requirements but reliable criteria about their completeness, consistency, and realizability are missing. Furthermore, the resulting artifact is a document, which must be read and understood by humans, which itself is error-prone. It is obvious that errors and ambiguities result in an unwanted solution which is often and in the worst case only discovered in the final stage: Testing. This paper outlines an approach for constructive requirements modeling, which describes completely a customer’s demands in a formal manner so that already during the requirements’ elicitation inconsistencies are eliminated, completeness is assessed, realizability is ensured, and all valid test cases can be derived by using a model-based testing approach. Therefore, we propose adaptions to the traditional V-model to not only save valuable development and testing time but also to achieve better results. The applicability is shown on the example of the software for an auxiliary heating system at a large German OEM.
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| 8. |
- Berger, Stella A, et al.
(författare)
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Water temperature and stratification depth independently shift cardinal events during plankton spring succession
- 2010
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Ingår i: Global Change Biology. - : Wiley. - 1354-1013 .- 1365-2486. ; 16:7, s. 1954-1965
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Tidskriftsartikel (refereegranskat)abstract
- In deep temperate lakes, the beginning of the growing season is triggered by thermal stratification, which alleviates light limitation of planktonic producers in the surface layer and prevents heat loss to deeper strata. The sequence of subsequent phenological events (phytoplankton spring bloom, grazer peak, clearwater phase) results in part from coupled phytoplankton–grazer interactions. Disentangling the separate, direct effects of correlated climatic drivers (stratification-dependent underwater light climate vs. water temperature) from their indirect effects mediated through trophic feedbacks is impossible using observational field data, which challenges our understanding of global warming effects on seasonal plankton dynamics. We therefore manipulated water temperature and stratification depth independently in experimental field mesocosms containing ambient microplankton and inocula of the resident grazer Daphnia hyalina. Higher light availability in shallower surface layers accelerated primary production, warming accelerated consumption and growth of Daphnia, and both factors speeded up successional dynamics driven by trophic feedbacks. Specifically, phytoplankton peaked and decreased earlier and Daphnia populations increased and peaked earlier at both shallower stratification and higher temperature. The timing of ciliate dynamics was unrelated to both factors. Volumetric peak densities of phytoplankton, ciliates and Daphnia in the surface layer were also unaffected by temperature but declined with stratification depth in parallel with light availability. The latter relationship vanished, however, when population sizes were integrated over the entire water column. Overall our results suggest that, integrated over the entire water column of a deep lake, surface warming and shallower stratification independently speed up spring successional events, whereas the magnitudes of phytoplankton and zooplankton spring peaks are less sensitive to these factors. Therefore, accelerated dynamics under warming need not lead to a trophic mismatch (given similar grazer inocula at the time of stratification). We emphasize that entire water column dynamics must be studied to estimate global warming effects on lake ecosystems.
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| 9. |
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| 10. |
- Diehl, Sebastian, et al.
(författare)
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An experimental demonstration of the critical depth principle
- 2015
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Ingår i: ICES Journal of Marine Science. - : Oxford University Press (OUP). - 1054-3139 .- 1095-9289. ; 72:6, s. 2051-2060
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Tidskriftsartikel (refereegranskat)abstract
- Sverdrup's critical depth hypothesis, which has had an almost canonical status in biological oceanography, has recently been challenged as a universal explanation for the formation of oceanic spring blooms, and several alternative hypotheses have been proposed. Arguments pro and contra alternative explanations have so far relied on theoretical considerations and purely observational data. In this paper, we propose that mesocosm experiments with natural plankton communities could make important contributions to the resolution of the issue. We first briefly review the foundations of the critical depth concept and derive an approximate relationship that relates optically scaled critical depth (="critical optical depth", i.e. the product of the light attenuation coefficient and the critical depth) to light-dependent phytoplankton production in the mixed surface layer. We describe how this relationship can be used to scale experimental mesocosms such that they reproduce ambient light conditions of natural water columns from the surface down to the critical depth and beyond. We illustrate the power of the approach with a mesocosm study in which we experimentally controlled the onset of the spring bloom of a lake plankton community through the manipulation of optically scaled mixed-layer depth. This experiment may be the first experimental demonstration of the critical depth principle acting on a natural plankton community. Compensation light intensity (=minimum average mixed-layer light intensity required to trigger a bloom of the ambient plankton community) could be constrained to be somewhat above 3.2 moles PAR m(-2) d(-1), corresponding to a critical optical depth of 10.5. We compare these numbers to estimates from marine systems and end with a discussion of how experiments could be designed to (i) more accurately determine the critical depth in a given system and (ii) resolve among competing hypotheses for vernal bloom onset.
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