| 1. |
- Bravo, L, et al.
(författare)
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- 2021
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swepub:Mat__t
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| 2. |
- Tabiri, S, et al.
(författare)
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- 2021
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swepub:Mat__t
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| 3. |
- Nogueira, C. C., et al.
(författare)
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Atlas of Brazilian Snakes: Verified Point-Locality Maps to Mitigate the Wallacean Shortfall in a Megadiverse Snake Fauna
- 2019
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Ingår i: South American Journal of Herpetology. - : Brazilian Herpetological Society. - 1808-9798. ; 14
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Tidskriftsartikel (refereegranskat)abstract
- Accurate and detailed species distribution maps are fundamental for documenting and interpreting biological diversity. For snakes, an ecologically diverse group of reptiles, syntheses and detailed data on distribution patterns remain scarce. We present the first comprehensive collection of detailed, voucher-based, point-locality, range maps for all described and documented Brazilian snakes, with the major aim of mitigating the Wallacean shortfall and as a contribution towards a better understanding of this rich, threatened, and poorly studied megadiverse fauna. We recorded a total of 412 snake species in Brazil on the basis of an extensive and verified point-locality database of 163,498 entries and 75,681 unique records (available here as Online Supporting Information). Our results reveal previously undocumented patterns of distribution, sampling effort, richness, and endemism levels, resulting in a more objective view of snake diversity in the Neotropics. Apart from these achievements, we understand that the most relevant and enduring contribution of the present atlas is to stimulate researchers to publish corrections, additions, and new discoveries.
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| 4. |
- Sapkota, D., et al.
(författare)
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COVID-19 salivary signature: diagnostic and research opportunities
- 2021
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Ingår i: Journal of Clinical Pathology. - : BMJ. - 0021-9746 .- 1472-4146. ; 74:6, s. 344-349
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Tidskriftsartikel (refereegranskat)abstract
- The COVID-19 (caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)) epidemic started in Wuhan (Hubei Province, China) in mid-December 2019 and quickly spread across the world as a pandemic. As a key to tracing the disease and to implement strategies aimed at breaking the chain of disease transmission, extensive testing for SARS-CoV-2 was suggested. Although nasopharyngeal/oropharyngeal swabs are the most commonly used biological samples for SARS-CoV-2 diagnosis, they have a number of limitations related to sample collection and healthcare personnel safety. In this context, saliva is emerging as a promising alternative to nasopharyngeal/oropharyngeal swabs for COVID-19 diagnosis and monitoring. Saliva collection, being a non-invasive approach with possibility for self-collection, circumvents to a great extent the limitations associated with the use of nasopharyngeal/oropharyngeal swabs. In addition, various salivary biomarkers including the salivary metabolomics offer a high promise to be useful for better understanding of COVID-19 and possibly in the identification of patients with various degrees of severity, including asymptomatic carriers. This review summarises the clinical and scientific basis for the potential use of saliva for COVID-19 diagnosis and disease monitoring. Additionally, we discuss saliva-based biomarkers and their potential clinical and research applications related to COVID-19.
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| 5. |
- Braz, H. B., et al.
(författare)
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Reproductive Biology of the Fossorial Snake Apostolepis gaboi (Elapomorphini): A Threatened and Poorly Known Species from the Caatinga Region
- 2019
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Ingår i: South American Journal of Herpetology. - : Brazilian Herpetological Society. - 1808-9798. ; 14:1, s. 37-47
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Tidskriftsartikel (refereegranskat)abstract
- Knowledge of reproductive biology is essential to understand the intrinsic traits of any species and to elaborate effective conservation strategies, particularly for threatened species. Despite recent advances, knowledge on the reproductive biology of snakes remains deficient for most species, especially for tropical fossorial taxa. Apostolepis gaboi is a psammophilous, fossorial, and threatened snake endemic of the Quaternary Sand Dunes of the Sao Francisco River, Caatinga domain. Here, we present information on its reproductive biology based on macroscopic and microscopic data obtained from the examination of all specimens preserved in Brazilian museums. Specifically, we addressed sexual maturity, sexual dimorphism, clutch size, timing of gametogenesis, activity of the sexual segment of the kidney (SSK), and female sperm storage. Apostolepis gaboi is one of the smallest species of the genus. Females attain sexual maturity at larger body sizes and grow larger than males. However, adult females have relatively shorter tails than males. We found no sexual dimorphism in body circumference and head size. Clutch size is small and averages 4.5 eggs. All males from the wet season showed testes in spermiogenesis, ductus deferentia packed of sperm, and SSK hypertrophied and secretory. Secondary vitellogenesis also occurs in the wet season. Moreover, females in early vitellogenesis from the wet season showed sperm stored in the posterior infundibulum. Mating occurs in the second half of the wet season, as suggested by the finding of aggregations of sperm in the uterine lumen of a female in early secondary vitellogenesis. Mating is associated with gonadal activity in males. Sperm storage confers flexibility for females to ovulate at the most suitable time in an unpredictable habitat such as the Caatinga. Apostolepis gaboi exhibits similarities (association between mating and spermiogenesis, small clutch) and differences (absence of sexual dimorphism in head size and stoutness) compared with another Elapomorphini species. Lastly, we argue that some of the intrinsic traits of A. gaboi (small clutch and small body size) may increase its vulnerability to extinction, raising additional concerns to its conservation.
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| 6. |
- Braz, H. B., et al.
(författare)
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Reproductive Biology of the Fossorial Snake Apostolepis gaboi (Elapomorphini): A Threatened and Poorly Known Species from the Caatinga Region
- 2019
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Ingår i: South America Journal of herpetology. - 1808-9798. ; 14:1
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Tidskriftsartikel (refereegranskat)abstract
- Knowledge of reproductive biology is essential to understand the intrinsic traits of any species and to elaborate effective conservation strategies, particularly for threatened species. Despite recent advances, knowledge on the reproductive biology of snakes remains deficient for most species, especially for tropical fossorial taxa. Apostolepis gaboi is a psammophilous, fossorial, and threatened snake endemic of the Quaternary Sand Dunes of the São Francisco River, Caatinga domain. Here, we present information on its reproductive biology based on macroscopic and microscopic data obtained from the examination of all specimens preserved in Brazilian museums. Specifically, we addressed sexual maturity, sexual dimorphism, clutch size, timing of gametogenesis, activity of the sexual segment of the kidney (SSK), and female sperm storage. Apostolepis gaboi is one of the smallest species of the genus. Females attain sexual maturity at larger body sizes and grow larger than males. However, adult females have relatively shorter tails than males. We found no sexual dimorphism in body circumference and head size. Clutch size is small and averages 4.5 eggs. All males from the wet season showed testes in spermiogenesis, ductus deferentia packed of sperm, and SSK hypertrophied and secretory. Secondary vitellogenesis also occurs in the wet season. Moreover, females in early vitellogenesis from the wet season showed sperm stored in the posterior infundibulum. Mating occurs in the second half of the wet season, as suggested by the finding of aggregations of sperm in the uterine lumen of a female in early secondary vitellogenesis. Mating is associated with gonadal activity in males. Sperm storage confers flexibility for females to ovulate at the most suitable time in an unpredictable habitat such as the Caatinga. Apostolepis gaboi exhibits similarities (association between mating and spermiogenesis, small clutch) and differences (absence of sexual dimorphism in head size and stoutness) compared with another Elapomorphini species. Lastly, we argue that some of the intrinsic traits of A. gaboi (small clutch and small body size) may increase its vulnerability to extinction, raising additional concerns to its conservation. © 2019 Brazilian Society of Herpetology.
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| 7. |
- do Canto, A. M., et al.
(författare)
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Immunohistochemical analysis of BRAF V600E mutation in ameloblastomas
- 2019
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Ingår i: Clinical Oral Investigations. - : Springer Science and Business Media LLC. - 1432-6981 .- 1436-3771. ; 23:2, s. 779-784
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Tidskriftsartikel (refereegranskat)abstract
- ObjectiveThis study aimed to investigate the presence of BRAF V600E mutation in mandible ameloblastomas by correlating clinical and imaging data on the cases studied.MethodsEighty-four cases diagnosed as mandibular ameloblastoma were selected for analysis. The specimens were submitted to immunohistochemistry for detection of BRAF V600E mutated protein. Clinical-pathological data such as age, gender, tumour size, mandibular location, radiographic aspects, histological type and sub-type, and tumour status were collected. The clinical-pathological parameters were categorised and analysed according to BRAF V600E detection.ResultsOf the 84 patients, 78.6% (66 cases) demonstrated positivity for anti-BRAF V600E antibody, whereas 18 were negative (21.4%). The correlation between BRAF expression and variables showed statistical significances for mandibular location (P=0.0353) and tumour size (P=0.008), whereas no statistical significance was observed for gender, age, radiographic aspect, histological pattern, histological sub-type and tumour status. Multivariate logistic regression revealed a significant risk for BRAF positivity in tumours with posterior mandibular location (OR=7.23, P=0.0451) and size >4cm (OR=7.29, P=0.0150).ConclusionBRAF V600E mutation is common in mandibular ameloblastomas, especially in cases of tumours larger than 4cm and in the posterior region of the mandible. In addition, this mutation can occur regardless of histological type of the tumour, age, gender, radiographic aspect and tumour status.Clinical significanceThe association between clinical-pathologic features and BRAF V600E mutation in ameloblastomas may provide directions for the treatment of this neoplasia. The use of BRAF inhibitors for targeted therapy could lead to an establishment of an alternative compared to the resective surgery.
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| 8. |
- Guedes, Thaís, et al.
(författare)
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Patterns, biases and prospects in the distribution and diversity of Neotropical snakes
- 2018
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Ingår i: Global Ecology and Biogeography. - : Wiley. - 1466-822X .- 1466-8238. ; 27:1, s. 14-21
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Tidskriftsartikel (refereegranskat)abstract
- Motivation: We generated a novel database of Neotropical snakes (one of the world's richest herpetofauna) combining the most comprehensive, manually compiled distribution dataset with publicly available data. We assess, for the first time, the diversity patterns for all Neotropical snakes as well as sampling density and sampling biases. Main types of variables contained: We compiled three databases of species occurrences: a dataset downloaded from the Global Biodiversity Information Facility (GBIF), a verified dataset built through taxonomic work and specialized literature, and a combined dataset comprising a cleaned version of the GBIF dataset merged with the verified dataset. Spatial location and grain: Neotropics, Behrmann projection equivalent to 1 degrees x 1 degrees. Results: The combined dataset provides the most comprehensive distribution database for Neotropical snakes to date. It contains 147,515 records for 886 species across 12 families, representing 74% of all species of snakes, spanning 27 countries in the Americas. Species richness and phylogenetic diversity show overall similar patterns. Amazonia is the least sampled Neotropical region, whereas most well-sampled sites are located near large universities and scientific collections. We provide a list and updated maps of geographical distribution of all snake species surveyed. Main conclusions: The biodiversity metrics of Neotropical snakes reflect patterns previously documented for other vertebrates, suggesting that similar factors may determine the diversity of both ectothermic and endothermic animals. We suggest conservation strategies for high-diversity areas and sampling efforts be directed towards Amazonia and poorly known species.
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| 9. |
- Marcelino, Bmrd, et al.
(författare)
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Comparison of Immunohistochemistry and DNA Sequencing for BRAF V600E Mutation Detection in Mandibular Ameloblastomas
- 2021
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Ingår i: Applied Immunohistochemistry & Molecular Morphology. - : Ovid Technologies (Wolters Kluwer Health). - 1541-2016. ; 29:5, s. 390-393
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Tidskriftsartikel (refereegranskat)abstract
- This study aimed to investigate the presence of BRAF V600E mutation in mandibular ameloblastoma by comparing the results of molecular detection and immunohistochemical analysis. A 128 cases of mandibular ameloblastoma and 30 cases of dentigerous cyst (control group) were selected for analysis. Detection of BRAF V600E mutation was performed with immunohistochemistry (IHC) and polymerase chain reaction techniques. Clinico-pathologic data were collected in order to investigate possible associations with the mutation. Of the 128 cases submitted to IHC, 81.2% (108 cases) showed positivity for anti-BRAF V600E antibody, whereas 24 were negative (18.8%). Molecular analysis of the BRAF V600E mutation by polymerase chain reaction was possible in 116 cases due to DNA quality. Of these cases, 96 were positive (82.8%) and 20 negative (17.2%). All cases of dentigerous cyst were negative for BRAF V600E mutation in both techniques. Considering the sequencing as a gold standard method, the receiver operating characteristics curve analysis showed sensitivity of 0.99 and specificity of 1 (area under the curve=0.995, standard error=0.006; P<0.001; 95% confidence interval=0.983 to 1). We also tested the agreement between the techniques by using the Cohen's kappa coefficient, with kappa being 0.97 (P<0.001). IHC is a reliable test for identifying the BRAF V600E mutation in ameloblastomas, presenting advantages such as being more frequently used in surgical pathology laboratories and requiring fewer critical steps for paraffin-embedded tissue compared with molecular biology techniques.
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| 10. |
- Palmieri, M., et al.
(författare)
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Frequency and Evolution of Acute Oral Complications in Patients Undergoing Radiochemotherapy Treatment for Head and Neck Squamous Cell Carcinoma
- 2021
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Ingår i: Ear, Nose and Throat Journal. - : SAGE Publications. - 0145-5613 .- 1942-7522. ; 100:5 suppl.
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Tidskriftsartikel (refereegranskat)abstract
- Despite its effectiveness, radiochemotherapy treatment in the head and neck region is accompanied by acute oral complications such as oral mucositis, dysphagia, xerostomia, and dysgeusia. The aim of this study was to analyze and prospectively assess the frequency and evolution of acute oral complications during radiochemotherapy in patients diagnosed with squamous cell carcinoma in the head and neck region. We have analyzed oral complications of 20 patients during 6 weeks of radiochemotherapy treatment for squamous cell carcinoma. Oral mucositis was evaluated according to the World Health Organization criteria, dysphagia, and dysgeusia according to the National Cancer Institute Common Toxicity Criteria, and xerostomia according to parameters set by the Seminars in Radiation Oncology. Mucositis was first observed in the second week and all patients presented some degree of mucositis in the fourth week of radiotherapy. Xerostomia and dysphagia were initially reported already in the first week of radiotherapy. All patients presented xerostomia in the fourth week; however, dysphagia was observed in all patients, only in the sixth week. Dysgeusia was first observed in the second week, becoming more severe in the third week. Acute oral complications can be observed throughout the treatment, but the third week of radiotherapy seems to represent a critical week, regardless of the grade of the complication. The sixth week presents the worst grades of these complications. Knowledge about the natural course of oral complications during radiotherapy is important to develop better strategies for treatment and improve the patients’ quality of life. © The Author(s) 2019.
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| 11. |
- Schwab, G., et al.
(författare)
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Lack of direct association between oral mucosal lesions and SARS-CoV-2 in a cohort of patients hospitalised with COVID-19
- 2022
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Ingår i: Journal of Oral Microbiology. - : Informa UK Limited. - 2000-2297. ; 14:1
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Tidskriftsartikel (refereegranskat)abstract
- Background COVID-19 is a disease affecting various human organs and systems, in which the virus seeks to interact with angiotensin-converting enzyme 2 receptors. These receptors are present in the oral cavity, but the direct relationship between such an interaction and possible oral manifestations of COVID-19 is still unclear. Aim The present study evaluated oral manifestations in a cohort of COVID-19 patients during the period of hospitalisation. Methods In total, 154 patients presenting moderate-to-severe forms of COVID-19 had their oral mucosa examined twice a week until the final outcome, either discharge or death. The oral alterations observed in the patients were grouped into Group 1 (pre-existing conditions and opportunistic oral lesions) and Group 2 (oral mucosal changes related to hospitalization). Results Oral lesions found in the patients of Group 1 are not suggestive of SARS-CoV-2 infection as they are mainly caused by opportunistic infections. On the other hand, oral alterations found in the patients of Group 2 were statistically (P < 0.001) related to intubation and longer period of hospitalisation. Conclusion It is unlikely that ulcerative lesions in the oral cavity are a direct manifestation of SARS-CoV-2 or a marker of COVID-19 progression.
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